RNA–Protein interactions for RNA: ENST00000471477.1

COL15A1-203, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-203ENST00000471477 A8MUN3 132 aa11.84□□□□□ -0.51
COL15A1-203ENST00000471477 KRTAP9-3Q9BYQ3 159 aa11.83□□□□□ -0.52
COL15A1-203ENST00000471477 KRTAP3-3Q9BYR6 98 aa11.83□□□□□ -0.52
COL15A1-203ENST00000471477 SERP2Q8N6R1 65 aa11.69□□□□□ -0.54
COL15A1-203ENST00000471477 LCE2BO14633 110 aa11.69□□□□□ -0.54
COL15A1-203ENST00000471477 NDUFC1O43677 76 aa11.69□□□□□ -0.54
COL15A1-203ENST00000471477 DMAC1Q96GE9 116 aa11.69□□□□□ -0.54
COL15A1-203ENST00000471477 SNURFQ9Y675 71 aa11.67□□□□□ -0.54
COL15A1-203ENST00000471477 C20orf197Q8N268 126 aa11.61□□□□□ -0.55
COL15A1-203ENST00000471477 USH2AO75445 5202 aa11.59□□□□□ -0.55
COL15A1-203ENST00000471477 ANAPC13Q9BS18 74 aa11.53□□□□□ -0.56
COL15A1-203ENST00000471477 COX7CP15954 63 aa11.49□□□□□ -0.57
COL15A1-203ENST00000471477 ACYP2P14621 99 aa11.47□□□□□ -0.57
COL15A1-203ENST00000471477 H0YAA0 97 aa11.44□□□□□ -0.58
COL15A1-203ENST00000471477 KRTAP19-1Q8IUB9 90 aa11.43□□□□□ -0.58
COL15A1-203ENST00000471477 SPANXA2-OT1Q8N9U9 137 aa11.42□□□□□ -0.58
COL15A1-203ENST00000471477 SSPOA2VEC9 5147 aa11.41□□□□□ -0.58
COL15A1-203ENST00000471477 ADM2Q7Z4H4 148 aa11.37□□□□□ -0.59
COL15A1-203ENST00000471477 SPRR2GQ9BYE4 73 aa11.35□□□□□ -0.59
COL15A1-203ENST00000471477 CRIPTQ9P021 101 aa11.3□□□□□ -0.6
COL15A1-203ENST00000471477 CHKB-CPT1BH3BT56 60 aa11.28□□□□□ -0.6
COL15A1-203ENST00000471477 CYSTM1Q9H1C7 97 aa11.25□□□□□ -0.61
COL15A1-203ENST00000471477 CCDC179H3BU77 68 aa11.24□□□□□ -0.61
COL15A1-203ENST00000471477 SPTSSBQ8NFR3 76 aa11.24□□□□□ -0.61
COL15A1-203ENST00000471477 KRTAP19-6Q3LI70 58 aa11.21□□□□□ -0.61
COL15A1-203ENST00000471477 KRTAP19-8Q3LI54 63 aa11.2□□□□□ -0.62
COL15A1-203ENST00000471477 H7BZZ5 65 aa11.19□□□□□ -0.62
COL15A1-203ENST00000471477 P0C880 135 aa11.18□□□□□ -0.62
COL15A1-203ENST00000471477 Q5VV11 94 aa11.17□□□□□ -0.62
COL15A1-203ENST00000471477 MT1BP07438 61 aa11.16□□□□□ -0.62
COL15A1-203ENST00000471477 KRTAP3-2Q9BYR7 98 aa11.15□□□□□ -0.62
COL15A1-203ENST00000471477 FCGBPQ9Y6R7 5405 aaPredicted RBP11.13□□□□□ -0.63
COL15A1-203ENST00000471477 COA5Q86WW8 74 aa11.09□□□□□ -0.63
COL15A1-203ENST00000471477 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.08□□□□□ -0.64
COL15A1-203ENST00000471477 R4GN34 69 aa11.04□□□□□ -0.64
COL15A1-203ENST00000471477 PCP4P48539 62 aa11.02□□□□□ -0.64
COL15A1-203ENST00000471477 M0QZ58 72 aa10.98□□□□□ -0.65
COL15A1-203ENST00000471477 KRTAP9-7A8MTY7 169 aa10.86□□□□□ -0.67
COL15A1-203ENST00000471477 ATP5EP56381 51 aaPredicted RBP10.86□□□□□ -0.67
COL15A1-203ENST00000471477 TMEM258P61165 79 aa10.86□□□□□ -0.67
COL15A1-203ENST00000471477 A6NN06 94 aa10.84□□□□□ -0.67
COL15A1-203ENST00000471477 LINC01554Q52M75 96 aa10.81□□□□□ -0.68
COL15A1-203ENST00000471477 KRTAP10-5P60370 271 aa10.8□□□□□ -0.68
COL15A1-203ENST00000471477 MACF1Q9UPN3 7388 aaKnown RBP10.77□□□□□ -0.69
COL15A1-203ENST00000471477 PLAC4Q8WY50 150 aa10.75□□□□□ -0.69
COL15A1-203ENST00000471477 SEC61GP60059 68 aa10.7□□□□□ -0.7
COL15A1-203ENST00000471477 SERP1Q9Y6X1 66 aa10.67□□□□□ -0.7
COL15A1-203ENST00000471477 KRTAP13-4Q3LI77 160 aa10.64□□□□□ -0.71
COL15A1-203ENST00000471477 SYNE2Q8WXH0 6885 aaKnown RBP10.58□□□□□ -0.72
COL15A1-203ENST00000471477 MT1XP80297 61 aa10.58□□□□□ -0.72
COL15A1-203ENST00000471477 PRO2289Q9P1D8 64 aa10.55□□□□□ -0.72
COL15A1-203ENST00000471477 A0A1B0GU69 56 aa10.5□□□□□ -0.73
COL15A1-203ENST00000471477 A0A1B0GU33 70 aa10.49□□□□□ -0.73
COL15A1-203ENST00000471477 KRTAP6-3Q3LI67 103 aa10.47□□□□□ -0.73
COL15A1-203ENST00000471477 SPATA8Q6RVD6 105 aa10.42□□□□□ -0.74
COL15A1-203ENST00000471477 A0A0D9SG42 100 aa10.36□□□□□ -0.75
COL15A1-203ENST00000471477 LINC01558Q9Y6Z2 57 aa10.33□□□□□ -0.76
COL15A1-203ENST00000471477 PRR15LQ9BU68 103 aa10.31□□□□□ -0.76
COL15A1-203ENST00000471477 RPS28P62857 69 aaKnown RBP10.3□□□□□ -0.76
COL15A1-203ENST00000471477 CAMK2N1Q7Z7J9 78 aa10.22□□□□□ -0.77
COL15A1-203ENST00000471477 SMIM26A0A096LP01 95 aa10.21□□□□□ -0.78
COL15A1-203ENST00000471477 KRTAP12-2P59991 146 aa10.21□□□□□ -0.78
COL15A1-203ENST00000471477 SPINT4Q6UDR6 99 aa10.17□□□□□ -0.78
COL15A1-203ENST00000471477 KRTAP12-1P59990 96 aa10.16□□□□□ -0.78
COL15A1-203ENST00000471477 V9GYY9 64 aa10.16□□□□□ -0.78
COL15A1-203ENST00000471477 A8MU10 97 aa10.14□□□□□ -0.79
COL15A1-203ENST00000471477 KMT2DO14686 5537 aa10.12□□□□□ -0.79
COL15A1-203ENST00000471477 KRTAP5-9P26371 169 aa10.11□□□□□ -0.79
COL15A1-203ENST00000471477 KRTAP10-7P60409 375 aaPredicted RBP10.11□□□□□ -0.79
COL15A1-203ENST00000471477 Q1T7F1 81 aa10.09□□□□□ -0.79
COL15A1-203ENST00000471477 KRTAP10-12P60413 245 aa10.04□□□□□ -0.8
COL15A1-203ENST00000471477 UQCR11O14957 56 aa9.99□□□□□ -0.81
COL15A1-203ENST00000471477 KRTAP4-8A0A0G2JLE6 195 aa9.98□□□□□ -0.81
COL15A1-203ENST00000471477 KRTAP8-1Q8IUC2 63 aa9.98□□□□□ -0.81
COL15A1-203ENST00000471477 KRTAP4-8Q9BYQ9 185 aa9.98□□□□□ -0.81
COL15A1-203ENST00000471477 PSPHP1O15172 72 aa9.96□□□□□ -0.82
COL15A1-203ENST00000471477 NEBP20929 6669 aa9.95□□□□□ -0.82
COL15A1-203ENST00000471477 MUC12Q9UKN1 5478 aa9.95□□□□□ -0.82
COL15A1-203ENST00000471477 SPRR2FQ96RM1 72 aa9.87□□□□□ -0.83
COL15A1-203ENST00000471477 MIR22HGQ0VDD5 57 aa9.81□□□□□ -0.84
COL15A1-203ENST00000471477 MDN1Q9NU22 5596 aa9.71□□□□□ -0.85
COL15A1-203ENST00000471477 A6NED7 52 aa9.69□□□□□ -0.86
COL15A1-203ENST00000471477 C10orf95Q9H7T3 257 aa9.66□□□□□ -0.86
COL15A1-203ENST00000471477 SPRR2EP22531 72 aa9.65□□□□□ -0.87
COL15A1-203ENST00000471477 SPRR2BP35325 72 aa9.65□□□□□ -0.87
COL15A1-203ENST00000471477 SPRR2AP35326 72 aa9.65□□□□□ -0.87
COL15A1-203ENST00000471477 KRTAP20-1Q3LI63 56 aa9.56□□□□□ -0.88
COL15A1-203ENST00000471477 LCE1AQ5T7P2 110 aa9.56□□□□□ -0.88
COL15A1-203ENST00000471477 TNP1P09430 55 aa9.54□□□□□ -0.88
COL15A1-203ENST00000471477 K7ERS5 55 aa9.52□□□□□ -0.89
COL15A1-203ENST00000471477 KRTAP19-7Q3SYF9 63 aa9.44□□□□□ -0.9
COL15A1-203ENST00000471477 CDC42SE1Q9NRR8 79 aa9.41□□□□□ -0.9
COL15A1-203ENST00000471477 KRTAP2-3P0C7H8 128 aa9.39□□□□□ -0.91
COL15A1-203ENST00000471477 KRTAP2-4Q9BYR9 128 aa9.39□□□□□ -0.91
COL15A1-203ENST00000471477 LCE3AQ5TA76 89 aa9.36□□□□□ -0.91
COL15A1-203ENST00000471477 MT1EP04732 61 aa9.34□□□□□ -0.91
COL15A1-203ENST00000471477 KRTAP19-5Q3LI72 72 aa9.33□□□□□ -0.92
COL15A1-203ENST00000471477 SPRR2DP22532 72 aa9.32□□□□□ -0.92
COL15A1-203ENST00000471477 BRK1Q8WUW1 75 aa9.22□□□□□ -0.93
COL15A1-203ENST00000471477 KRTAP25-1Q3LHN0 102 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms