RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 ACYP2P14621 99 aa6.41□□□□□ -1.38
TRAF4-208ENST00000469529 H1FX-AS1Q4G0G2 97 aa6.38□□□□□ -1.39
TRAF4-208ENST00000469529 LCE2CQ5TA81 110 aa6.32□□□□□ -1.4
TRAF4-208ENST00000469529 KRTAP9-2Q9BYQ4 174 aa6.32□□□□□ -1.4
TRAF4-208ENST00000469529 COA5Q86WW8 74 aa6.28□□□□□ -1.4
TRAF4-208ENST00000469529 V9GYY9 64 aa6.28□□□□□ -1.4
TRAF4-208ENST00000469529 FLGP20930 4061 aaPredicted RBP6.26□□□□□ -1.41
TRAF4-208ENST00000469529 KRTAP3-3Q9BYR6 98 aa6.24□□□□□ -1.41
TRAF4-208ENST00000469529 S4R3F8 94 aa6.24□□□□□ -1.41
TRAF4-208ENST00000469529 LCA10Q71F78 164 aa6.23□□□□□ -1.41
TRAF4-208ENST00000469529 KRTAP9-6A0A140TA67 174 aa6.22□□□□□ -1.41
TRAF4-208ENST00000469529 CHKB-CPT1BH3BT56 60 aa6.22□□□□□ -1.41
TRAF4-208ENST00000469529 Q1T7F1 81 aa6.22□□□□□ -1.41
TRAF4-208ENST00000469529 SPTSSBQ8NFR3 76 aa6.22□□□□□ -1.41
TRAF4-208ENST00000469529 MT1HP80294 61 aa6.19□□□□□ -1.42
TRAF4-208ENST00000469529 CSAG1Q6PB30 78 aa6.19□□□□□ -1.42
TRAF4-208ENST00000469529 PRO0628Q9UI54 55 aa6.16□□□□□ -1.42
TRAF4-208ENST00000469529 LCE2DQ5TA82 110 aaPredicted RBP6.13□□□□□ -1.43
TRAF4-208ENST00000469529 H0YAA0 97 aa6.1□□□□□ -1.43
TRAF4-208ENST00000469529 M0R2T5 61 aa6.08□□□□□ -1.44
TRAF4-208ENST00000469529 KRTAP10-6P60371 365 aaPredicted RBP6.07□□□□□ -1.44
TRAF4-208ENST00000469529 LORP23490 312 aaPredicted RBP6.06□□□□□ -1.44
TRAF4-208ENST00000469529 LINC01558Q9Y6Z2 57 aa6.06□□□□□ -1.44
TRAF4-208ENST00000469529 BRK1Q8WUW1 75 aa6.04□□□□□ -1.44
TRAF4-208ENST00000469529 KRTAP3-2Q9BYR7 98 aa6□□□□□ -1.45
TRAF4-208ENST00000469529 SEC61GP60059 68 aa5.98□□□□□ -1.45
TRAF4-208ENST00000469529 PSPHP1O15172 72 aa5.97□□□□□ -1.45
TRAF4-208ENST00000469529 PRR15LQ9BU68 103 aa5.97□□□□□ -1.45
TRAF4-208ENST00000469529 CRCT1Q9UGL9 99 aa5.97□□□□□ -1.45
TRAF4-208ENST00000469529 KRTAP9-8Q9BYQ0 159 aa5.96□□□□□ -1.46
TRAF4-208ENST00000469529 A0A1B0GU69 56 aa5.95□□□□□ -1.46
TRAF4-208ENST00000469529 Q5VV11 94 aa5.95□□□□□ -1.46
TRAF4-208ENST00000469529 ADM2Q7Z4H4 148 aa5.93□□□□□ -1.46
TRAF4-208ENST00000469529 MT2AP02795 61 aa5.89□□□□□ -1.47
TRAF4-208ENST00000469529 P0C880 135 aa5.89□□□□□ -1.47
TRAF4-208ENST00000469529 CRIPTQ9P021 101 aa5.89□□□□□ -1.47
TRAF4-208ENST00000469529 A6NED7 52 aa5.88□□□□□ -1.47
TRAF4-208ENST00000469529 FSIP2Q5CZC0 6907 aa5.87□□□□□ -1.47
TRAF4-208ENST00000469529 CDC42SE1Q9NRR8 79 aa5.85□□□□□ -1.47
TRAF4-208ENST00000469529 A0A1B0GU33 70 aa5.84□□□□□ -1.47
TRAF4-208ENST00000469529 M0QZ58 72 aa5.84□□□□□ -1.47
TRAF4-208ENST00000469529 MT1FP04733 61 aa5.83□□□□□ -1.48
TRAF4-208ENST00000469529 KRTAP10-10P60014 251 aa5.81□□□□□ -1.48
TRAF4-208ENST00000469529 UQCR11O14957 56 aa5.78□□□□□ -1.48
TRAF4-208ENST00000469529 SPRR2GQ9BYE4 73 aa5.77□□□□□ -1.49
TRAF4-208ENST00000469529 KRTAP9-3Q9BYQ3 159 aa5.76□□□□□ -1.49
TRAF4-208ENST00000469529 PMAIP1Q13794 54 aa5.75□□□□□ -1.49
TRAF4-208ENST00000469529 R4GN34 69 aa5.75□□□□□ -1.49
TRAF4-208ENST00000469529 KRTAP13-4Q3LI77 160 aa5.72□□□□□ -1.49
TRAF4-208ENST00000469529 SPATA8Q6RVD6 105 aa5.72□□□□□ -1.49
TRAF4-208ENST00000469529 KRTAP19-1Q8IUB9 90 aa5.72□□□□□ -1.49
TRAF4-208ENST00000469529 MIR22HGQ0VDD5 57 aa5.68□□□□□ -1.5
TRAF4-208ENST00000469529 A6NN06 94 aa5.66□□□□□ -1.5
TRAF4-208ENST00000469529 KTN1-AS1Q86SY8 53 aa5.65□□□□□ -1.5
TRAF4-208ENST00000469529 USH2AO75445 5202 aa5.65□□□□□ -1.51
TRAF4-208ENST00000469529 LCE2BO14633 110 aa5.64□□□□□ -1.51
TRAF4-208ENST00000469529 KRTAP19-8Q3LI54 63 aa5.64□□□□□ -1.51
TRAF4-208ENST00000469529 SSPOA2VEC9 5147 aa5.59□□□□□ -1.51
TRAF4-208ENST00000469529 A8MU10 97 aa5.59□□□□□ -1.51
TRAF4-208ENST00000469529 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.56□□□□□ -1.52
TRAF4-208ENST00000469529 LINC01554Q52M75 96 aa5.55□□□□□ -1.52
TRAF4-208ENST00000469529 A0A0D9SG42 100 aa5.54□□□□□ -1.52
TRAF4-208ENST00000469529 KRTAP9-7A8MTY7 169 aa5.54□□□□□ -1.52
TRAF4-208ENST00000469529 KRTAP12-1P59990 96 aa5.53□□□□□ -1.52
TRAF4-208ENST00000469529 MT1BP07438 61 aa5.52□□□□□ -1.53
TRAF4-208ENST00000469529 PLAC4Q8WY50 150 aa5.49□□□□□ -1.53
TRAF4-208ENST00000469529 FCGBPQ9Y6R7 5405 aaPredicted RBP5.48□□□□□ -1.53
TRAF4-208ENST00000469529 KRTAP12-2P59991 146 aa5.47□□□□□ -1.53
TRAF4-208ENST00000469529 K7ERS5 55 aa5.46□□□□□ -1.54
TRAF4-208ENST00000469529 KRTAP19-6Q3LI70 58 aa5.46□□□□□ -1.54
TRAF4-208ENST00000469529 SPINT4Q6UDR6 99 aa5.44□□□□□ -1.54
TRAF4-208ENST00000469529 CAMK2N1Q7Z7J9 78 aa5.35□□□□□ -1.55
TRAF4-208ENST00000469529 MT1XP80297 61 aa5.31□□□□□ -1.56
TRAF4-208ENST00000469529 KRTAP10-5P60370 271 aa5.3□□□□□ -1.56
TRAF4-208ENST00000469529 PRO2289Q9P1D8 64 aa5.3□□□□□ -1.56
TRAF4-208ENST00000469529 C10orf95Q9H7T3 257 aa5.24□□□□□ -1.57
TRAF4-208ENST00000469529 MACF1Q9UPN3 7388 aaKnown RBP5.22□□□□□ -1.57
TRAF4-208ENST00000469529 ROMO1P60602 79 aa5.21□□□□□ -1.58
TRAF4-208ENST00000469529 PRAC1Q96KF2 57 aa5.21□□□□□ -1.58
TRAF4-208ENST00000469529 KRTAP6-3Q3LI67 103 aa5.2□□□□□ -1.58
TRAF4-208ENST00000469529 SYNE2Q8WXH0 6885 aaKnown RBP5.17□□□□□ -1.58
TRAF4-208ENST00000469529 KRTAP25-1Q3LHN0 102 aa5.14□□□□□ -1.59
TRAF4-208ENST00000469529 TNP1P09430 55 aa5.12□□□□□ -1.59
TRAF4-208ENST00000469529 KRTAP10-12P60413 245 aa5.08□□□□□ -1.6
TRAF4-208ENST00000469529 KRTAP23-1A1A580 65 aa5.06□□□□□ -1.6
TRAF4-208ENST00000469529 KRTAP10-7P60409 375 aaPredicted RBP5.04□□□□□ -1.6
TRAF4-208ENST00000469529 PP632Q6XCG6 107 aa4.96□□□□□ -1.62
TRAF4-208ENST00000469529 KRTAP5-9P26371 169 aa4.94□□□□□ -1.62
TRAF4-208ENST00000469529 NEBP20929 6669 aa4.89□□□□□ -1.63
TRAF4-208ENST00000469529 LCE3AQ5TA76 89 aa4.88□□□□□ -1.63
TRAF4-208ENST00000469529 KRTAP8-1Q8IUC2 63 aa4.88□□□□□ -1.63
TRAF4-208ENST00000469529 MUC12Q9UKN1 5478 aa4.87□□□□□ -1.63
TRAF4-208ENST00000469529 KRTAP4-8A0A0G2JLE6 195 aa4.87□□□□□ -1.63
TRAF4-208ENST00000469529 KRTAP4-8Q9BYQ9 185 aa4.87□□□□□ -1.63
TRAF4-208ENST00000469529 KRTAP20-1Q3LI63 56 aa4.83□□□□□ -1.64
TRAF4-208ENST00000469529 KMT2DO14686 5537 aa4.82□□□□□ -1.64
TRAF4-208ENST00000469529 SPRR2FQ96RM1 72 aa4.8□□□□□ -1.64
TRAF4-208ENST00000469529 KRTAP19-7Q3SYF9 63 aa4.75□□□□□ -1.65
TRAF4-208ENST00000469529 MDN1Q9NU22 5596 aa4.75□□□□□ -1.65
TRAF4-208ENST00000469529 SPRR2EP22531 72 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms