RNA–Protein interactions for RNA: ENST00000469140.2

MTA1-209, Transcript of metastasis associated 1, humanhuman

TSL 5

Gene MTA1, Length 1,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-209ENST00000469140 CHKB-CPT1BH3BT56 60 aa11.7□□□□□ -0.54
MTA1-209ENST00000469140 SMIM26A0A096LP01 95 aa11.66□□□□□ -0.54
MTA1-209ENST00000469140 S4R3F8 94 aa11.65□□□□□ -0.54
MTA1-209ENST00000469140 LCA10Q71F78 164 aa11.6□□□□□ -0.55
MTA1-209ENST00000469140 LCE2CQ5TA81 110 aa11.59□□□□□ -0.55
MTA1-209ENST00000469140 SPTSSBQ8NFR3 76 aa11.55□□□□□ -0.56
MTA1-209ENST00000469140 KRTAP3-3Q9BYR6 98 aa11.53□□□□□ -0.56
MTA1-209ENST00000469140 CSAG1Q6PB30 78 aa11.45□□□□□ -0.58
MTA1-209ENST00000469140 FLGP20930 4061 aaPredicted RBP11.42□□□□□ -0.58
MTA1-209ENST00000469140 MT1HP80294 61 aa11.37□□□□□ -0.59
MTA1-209ENST00000469140 FAT4Q6V0I7 4981 aa11.35□□□□□ -0.59
MTA1-209ENST00000469140 V9GYY9 64 aa11.32□□□□□ -0.6
MTA1-209ENST00000469140 PRO0628Q9UI54 55 aa11.27□□□□□ -0.6
MTA1-209ENST00000469140 M0R2T5 61 aa11.27□□□□□ -0.61
MTA1-209ENST00000469140 Q1T7F1 81 aa11.27□□□□□ -0.61
MTA1-209ENST00000469140 LINC01558Q9Y6Z2 57 aa11.26□□□□□ -0.61
MTA1-209ENST00000469140 H0YAA0 97 aa11.18□□□□□ -0.62
MTA1-209ENST00000469140 SEC61GP60059 68 aa11.18□□□□□ -0.62
MTA1-209ENST00000469140 A0A1B0GU69 56 aa11.16□□□□□ -0.62
MTA1-209ENST00000469140 PRR15LQ9BU68 103 aa11.12□□□□□ -0.63
MTA1-209ENST00000469140 ADM2Q7Z4H4 148 aa11.1□□□□□ -0.63
MTA1-209ENST00000469140 LCE2AQ5TA79 106 aaPredicted RBP11.09□□□□□ -0.63
MTA1-209ENST00000469140 KRTAP3-2Q9BYR7 98 aa11.08□□□□□ -0.64
MTA1-209ENST00000469140 PSPHP1O15172 72 aa11.04□□□□□ -0.64
MTA1-209ENST00000469140 KRTAP10-6P60371 365 aaPredicted RBP11.04□□□□□ -0.64
MTA1-209ENST00000469140 BRK1Q8WUW1 75 aa11□□□□□ -0.65
MTA1-209ENST00000469140 P0C880 135 aa10.99□□□□□ -0.65
MTA1-209ENST00000469140 Q5VV11 94 aa10.95□□□□□ -0.66
MTA1-209ENST00000469140 LORP23490 312 aaPredicted RBP10.94□□□□□ -0.66
MTA1-209ENST00000469140 KRTAP9-8Q9BYQ0 159 aa10.93□□□□□ -0.66
MTA1-209ENST00000469140 A0A1B0GU33 70 aa10.89□□□□□ -0.67
MTA1-209ENST00000469140 MT2AP02795 61 aa10.87□□□□□ -0.67
MTA1-209ENST00000469140 UQCR11O14957 56 aa10.79□□□□□ -0.68
MTA1-209ENST00000469140 MT1FP04733 61 aa10.79□□□□□ -0.68
MTA1-209ENST00000469140 KRTAP10-10P60014 251 aa10.79□□□□□ -0.68
MTA1-209ENST00000469140 CRIPTQ9P021 101 aa10.79□□□□□ -0.68
MTA1-209ENST00000469140 M0QZ58 72 aa10.76□□□□□ -0.69
MTA1-209ENST00000469140 R4GN34 69 aa10.74□□□□□ -0.69
MTA1-209ENST00000469140 A6NED7 52 aa10.73□□□□□ -0.69
MTA1-209ENST00000469140 KRTAP13-4Q3LI77 160 aa10.69□□□□□ -0.7
MTA1-209ENST00000469140 SPATA8Q6RVD6 105 aa10.67□□□□□ -0.7
MTA1-209ENST00000469140 MIR22HGQ0VDD5 57 aa10.63□□□□□ -0.71
MTA1-209ENST00000469140 CDC42SE1Q9NRR8 79 aa10.6□□□□□ -0.71
MTA1-209ENST00000469140 SPRR2GQ9BYE4 73 aa10.58□□□□□ -0.72
MTA1-209ENST00000469140 PMAIP1Q13794 54 aa10.57□□□□□ -0.72
MTA1-209ENST00000469140 KRTAP9-3Q9BYQ3 159 aa10.55□□□□□ -0.72
MTA1-209ENST00000469140 KRTAP19-1Q8IUB9 90 aa10.54□□□□□ -0.72
MTA1-209ENST00000469140 LINC01554Q52M75 96 aa10.5□□□□□ -0.73
MTA1-209ENST00000469140 A8MU10 97 aa10.48□□□□□ -0.73
MTA1-209ENST00000469140 A0A0D9SG42 100 aa10.47□□□□□ -0.73
MTA1-209ENST00000469140 A6NN06 94 aa10.37□□□□□ -0.75
MTA1-209ENST00000469140 KRTAP19-8Q3LI54 63 aa10.33□□□□□ -0.76
MTA1-209ENST00000469140 KRTAP12-1P59990 96 aa10.29□□□□□ -0.76
MTA1-209ENST00000469140 KTN1-AS1Q86SY8 53 aa10.28□□□□□ -0.76
MTA1-209ENST00000469140 LCE2BO14633 110 aa10.27□□□□□ -0.77
MTA1-209ENST00000469140 SPINT4Q6UDR6 99 aa10.27□□□□□ -0.77
MTA1-209ENST00000469140 KRTAP12-2P59991 146 aa10.24□□□□□ -0.77
MTA1-209ENST00000469140 K7ERS5 55 aa10.23□□□□□ -0.77
MTA1-209ENST00000469140 PLAC4Q8WY50 150 aa10.2□□□□□ -0.78
MTA1-209ENST00000469140 LCE2DQ5TA82 110 aaPredicted RBP10.18□□□□□ -0.78
MTA1-209ENST00000469140 MT1BP07438 61 aa10.18□□□□□ -0.78
MTA1-209ENST00000469140 CAMK2N1Q7Z7J9 78 aa10.03□□□□□ -0.8
MTA1-209ENST00000469140 USH2AO75445 5202 aa9.95□□□□□ -0.82
MTA1-209ENST00000469140 KRTAP9-2Q9BYQ4 174 aa9.86□□□□□ -0.83
MTA1-209ENST00000469140 MT1XP80297 61 aa9.8□□□□□ -0.84
MTA1-209ENST00000469140 PRO2289Q9P1D8 64 aa9.79□□□□□ -0.84
MTA1-209ENST00000469140 KRTAP10-5P60370 271 aa9.78□□□□□ -0.84
MTA1-209ENST00000469140 ROMO1P60602 79 aa9.74□□□□□ -0.85
MTA1-209ENST00000469140 C10orf95Q9H7T3 257 aa9.74□□□□□ -0.85
MTA1-209ENST00000469140 KRTAP19-6Q3LI70 58 aa9.73□□□□□ -0.85
MTA1-209ENST00000469140 SSPOA2VEC9 5147 aa9.65□□□□□ -0.87
MTA1-209ENST00000469140 FSIP2Q5CZC0 6907 aa9.62□□□□□ -0.87
MTA1-209ENST00000469140 PRAC1Q96KF2 57 aa9.54□□□□□ -0.88
MTA1-209ENST00000469140 TNP1P09430 55 aa9.52□□□□□ -0.89
MTA1-209ENST00000469140 KRTAP25-1Q3LHN0 102 aa9.5□□□□□ -0.89
MTA1-209ENST00000469140 CRCT1Q9UGL9 99 aa9.49□□□□□ -0.89
MTA1-209ENST00000469140 KRTAP10-7P60409 375 aaPredicted RBP9.39□□□□□ -0.91
MTA1-209ENST00000469140 KRTAP9-6A0A140TA67 174 aa9.38□□□□□ -0.91
MTA1-209ENST00000469140 KRTAP10-12P60413 245 aa9.32□□□□□ -0.92
MTA1-209ENST00000469140 FCGBPQ9Y6R7 5405 aaPredicted RBP9.3□□□□□ -0.92
MTA1-209ENST00000469140 KRTAP23-1A1A580 65 aa9.2□□□□□ -0.94
MTA1-209ENST00000469140 H3BS24 57 aa9.19□□□□□ -0.94
MTA1-209ENST00000469140 PP632Q6XCG6 107 aa9.14□□□□□ -0.95
MTA1-209ENST00000469140 LCE3AQ5TA76 89 aa9.12□□□□□ -0.95
MTA1-209ENST00000469140 KRTAP4-8A0A0G2JLE6 195 aa9.07□□□□□ -0.96
MTA1-209ENST00000469140 KRTAP4-8Q9BYQ9 185 aa9.07□□□□□ -0.96
MTA1-209ENST00000469140 KRTAP8-1Q8IUC2 63 aa8.96□□□□□ -0.98
MTA1-209ENST00000469140 KMT2DO14686 5537 aa8.92□□□□□ -0.98
MTA1-209ENST00000469140 KRTAP19-5Q3LI72 72 aa8.81□□□□□ -1
MTA1-209ENST00000469140 MACF1Q9UPN3 7388 aaKnown RBP8.8□□□□□ -1
MTA1-209ENST00000469140 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.78□□□□□ -1
MTA1-209ENST00000469140 KRTAP12-3P60328 96 aa8.78□□□□□ -1
MTA1-209ENST00000469140 KRTAP19-7Q3SYF9 63 aa8.75□□□□□ -1.01
MTA1-209ENST00000469140 MT1EP04732 61 aa8.62□□□□□ -1.03
MTA1-209ENST00000469140 KRTAP5-9P26371 169 aa8.6□□□□□ -1.03
MTA1-209ENST00000469140 SPRR2FQ96RM1 72 aa8.6□□□□□ -1.03
MTA1-209ENST00000469140 KRTAP15-1Q3LI76 137 aa8.56□□□□□ -1.04
MTA1-209ENST00000469140 KRTAP6-3Q3LI67 103 aa8.56□□□□□ -1.04
MTA1-209ENST00000469140 SYNE2Q8WXH0 6885 aaKnown RBP8.55□□□□□ -1.04
MTA1-209ENST00000469140 KRTAP9-7A8MTY7 169 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms