RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 A6NN06 94 aa7.86□□□□□ -1.15
COL27A1-203ENST00000468565 Q8N9P0 234 aaPredicted RBP7.86□□□□□ -1.15
COL27A1-203ENST00000468565 NOTCH2NLQ7Z3S9 236 aa7.86□□□□□ -1.15
COL27A1-203ENST00000468565 CDC42SE1Q9NRR8 79 aa7.85□□□□□ -1.15
COL27A1-203ENST00000468565 A0A0A0MQY5 61 aa7.84□□□□□ -1.15
COL27A1-203ENST00000468565 LCA10Q71F78 164 aa7.84□□□□□ -1.16
COL27A1-203ENST00000468565 PRR15LQ9BU68 103 aa7.83□□□□□ -1.16
COL27A1-203ENST00000468565 KRTAP23-1A1A580 65 aa7.82□□□□□ -1.16
COL27A1-203ENST00000468565 SPTSSBQ8NFR3 76 aa7.82□□□□□ -1.16
COL27A1-203ENST00000468565 A6NED7 52 aa7.8□□□□□ -1.16
COL27A1-203ENST00000468565 PCOTHQ58A44 107 aa7.8□□□□□ -1.16
COL27A1-203ENST00000468565 LINC00313P59037 77 aa7.78□□□□□ -1.16
COL27A1-203ENST00000468565 RPL37P61927 97 aaKnown RBP7.76□□□□□ -1.17
COL27A1-203ENST00000468565 Q5W150 140 aa7.72□□□□□ -1.17
COL27A1-203ENST00000468565 LINC01558Q9Y6Z2 57 aa7.72□□□□□ -1.17
COL27A1-203ENST00000468565 A8MU10 97 aa7.69□□□□□ -1.18
COL27A1-203ENST00000468565 COA5Q86WW8 74 aa7.68□□□□□ -1.18
COL27A1-203ENST00000468565 KRTAP19-2Q3LHN2 52 aa7.68□□□□□ -1.18
COL27A1-203ENST00000468565 KRTAP16-1A8MUX0 517 aa7.66□□□□□ -1.18
COL27A1-203ENST00000468565 KRTAP9-2Q9BYQ4 174 aa7.64□□□□□ -1.19
COL27A1-203ENST00000468565 IGKV2-30P06310 120 aa7.6□□□□□ -1.19
COL27A1-203ENST00000468565 KRTAP3-1Q9BYR8 98 aa7.6□□□□□ -1.19
COL27A1-203ENST00000468565 MT1HP80294 61 aa7.58□□□□□ -1.2
COL27A1-203ENST00000468565 C20orf166-AS1Q96NR2 134 aa7.58□□□□□ -1.2
COL27A1-203ENST00000468565 HRES1P13985 223 aa7.58□□□□□ -1.2
COL27A1-203ENST00000468565 A8MUU9 505 aa7.56□□□□□ -1.2
COL27A1-203ENST00000468565 LINC01554Q52M75 96 aa7.56□□□□□ -1.2
COL27A1-203ENST00000468565 ACYP2P14621 99 aa7.54□□□□□ -1.2
COL27A1-203ENST00000468565 COX6B2Q6YFQ2 88 aa7.52□□□□□ -1.2
COL27A1-203ENST00000468565 LOC100996750A0A140TA64 210 aa7.52□□□□□ -1.21
COL27A1-203ENST00000468565 DMAC1Q96GE9 116 aa7.52□□□□□ -1.21
COL27A1-203ENST00000468565 KRTAP4-6Q9BYQ5 205 aa7.52□□□□□ -1.21
COL27A1-203ENST00000468565 IGKV2D-30A0A075B6S6 120 aa7.5□□□□□ -1.21
COL27A1-203ENST00000468565 FLGP20930 4061 aaPredicted RBP7.49□□□□□ -1.21
COL27A1-203ENST00000468565 SPINK7P58062 85 aa7.47□□□□□ -1.21
COL27A1-203ENST00000468565 KRTAP19-4Q3LI73 84 aa7.44□□□□□ -1.22
COL27A1-203ENST00000468565 KRTAP10-6P60371 365 aaPredicted RBP7.43□□□□□ -1.22
COL27A1-203ENST00000468565 M0R2T5 61 aa7.42□□□□□ -1.22
COL27A1-203ENST00000468565 KRTAP9-6A0A140TA67 174 aa7.37□□□□□ -1.23
COL27A1-203ENST00000468565 KRTAP19-1Q8IUB9 90 aa7.36□□□□□ -1.23
COL27A1-203ENST00000468565 SPATA8Q6RVD6 105 aa7.35□□□□□ -1.23
COL27A1-203ENST00000468565 PRAC1Q96KF2 57 aa7.35□□□□□ -1.23
COL27A1-203ENST00000468565 A0A1B0GU69 56 aa7.27□□□□□ -1.25
COL27A1-203ENST00000468565 UQCR11O14957 56 aa7.27□□□□□ -1.25
COL27A1-203ENST00000468565 MIR22HGQ0VDD5 57 aa7.25□□□□□ -1.25
COL27A1-203ENST00000468565 CRCT1Q9UGL9 99 aa7.23□□□□□ -1.25
COL27A1-203ENST00000468565 LCE4AQ5TA78 99 aa7.23□□□□□ -1.25
COL27A1-203ENST00000468565 ADM2Q7Z4H4 148 aa7.22□□□□□ -1.25
COL27A1-203ENST00000468565 KRTAP4-12Q9BQ66 201 aa7.21□□□□□ -1.25
COL27A1-203ENST00000468565 KRTAP4-8Q9BYQ9 185 aa7.21□□□□□ -1.26
COL27A1-203ENST00000468565 FSIP2Q5CZC0 6907 aa7.19□□□□□ -1.26
COL27A1-203ENST00000468565 KRTAP9-7A8MTY7 169 aa7.19□□□□□ -1.26
COL27A1-203ENST00000468565 KRTAP9-8Q9BYQ0 159 aa7.18□□□□□ -1.26
COL27A1-203ENST00000468565 CSAG1Q6PB30 78 aa7.17□□□□□ -1.26
COL27A1-203ENST00000468565 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.11□□□□□ -1.27
COL27A1-203ENST00000468565 MT2AP02795 61 aa7.08□□□□□ -1.28
COL27A1-203ENST00000468565 ROMO1P60602 79 aa7.03□□□□□ -1.28
COL27A1-203ENST00000468565 MT1FP04733 61 aa7.02□□□□□ -1.29
COL27A1-203ENST00000468565 KRTAP25-1Q3LHN0 102 aa7.02□□□□□ -1.29
COL27A1-203ENST00000468565 KRTAP10-10P60014 251 aa6.98□□□□□ -1.29
COL27A1-203ENST00000468565 H1FX-AS1Q4G0G2 97 aa6.95□□□□□ -1.3
COL27A1-203ENST00000468565 KRTAP9-3Q9BYQ3 159 aa6.95□□□□□ -1.3
COL27A1-203ENST00000468565 USH2AO75445 5202 aa6.93□□□□□ -1.3
COL27A1-203ENST00000468565 A0A1B0GU33 70 aa6.91□□□□□ -1.3
COL27A1-203ENST00000468565 KRTAP9-9Q9BYP9 154 aa6.91□□□□□ -1.3
COL27A1-203ENST00000468565 KRTAP9-4Q9BYQ2 154 aa6.91□□□□□ -1.3
COL27A1-203ENST00000468565 LCE3BQ5TA77 95 aa6.91□□□□□ -1.3
COL27A1-203ENST00000468565 S4R3F8 94 aa6.89□□□□□ -1.31
COL27A1-203ENST00000468565 SSPOA2VEC9 5147 aa6.89□□□□□ -1.31
COL27A1-203ENST00000468565 KRTAP15-1Q3LI76 137 aa6.87□□□□□ -1.31
COL27A1-203ENST00000468565 H0YAA0 97 aa6.85□□□□□ -1.31
COL27A1-203ENST00000468565 K7ERS5 55 aa6.84□□□□□ -1.32
COL27A1-203ENST00000468565 FCGBPQ9Y6R7 5405 aaPredicted RBP6.71□□□□□ -1.33
COL27A1-203ENST00000468565 P0C880 135 aa6.7□□□□□ -1.34
COL27A1-203ENST00000468565 KRTAP19-6Q3LI70 58 aa6.69□□□□□ -1.34
COL27A1-203ENST00000468565 KRTAP13-4Q3LI77 160 aa6.6□□□□□ -1.35
COL27A1-203ENST00000468565 SPINT4Q6UDR6 99 aa6.6□□□□□ -1.35
COL27A1-203ENST00000468565 A0A0D9SG42 100 aa6.56□□□□□ -1.36
COL27A1-203ENST00000468565 SPRR2GQ9BYE4 73 aa6.52□□□□□ -1.37
COL27A1-203ENST00000468565 M0QZ58 72 aa6.51□□□□□ -1.37
COL27A1-203ENST00000468565 MACF1Q9UPN3 7388 aaKnown RBP6.5□□□□□ -1.37
COL27A1-203ENST00000468565 KRTAP19-8Q3LI54 63 aa6.48□□□□□ -1.37
COL27A1-203ENST00000468565 LCE5AQ5TCM9 118 aa6.48□□□□□ -1.37
COL27A1-203ENST00000468565 NDUFAF8A1L188 74 aa6.47□□□□□ -1.37
COL27A1-203ENST00000468565 LCE1DQ5T752 114 aa6.46□□□□□ -1.37
COL27A1-203ENST00000468565 KRTAP4-8A0A0G2JLE6 195 aa6.46□□□□□ -1.38
COL27A1-203ENST00000468565 MT1BP07438 61 aa6.46□□□□□ -1.38
COL27A1-203ENST00000468565 CRIPTQ9P021 101 aa6.44□□□□□ -1.38
COL27A1-203ENST00000468565 SYNE2Q8WXH0 6885 aaKnown RBP6.42□□□□□ -1.38
COL27A1-203ENST00000468565 KRTAP12-2P59991 146 aa6.4□□□□□ -1.39
COL27A1-203ENST00000468565 KRTAP12-1P59990 96 aa6.39□□□□□ -1.39
COL27A1-203ENST00000468565 R4GN34 69 aa6.37□□□□□ -1.39
COL27A1-203ENST00000468565 KRTAP6-3Q3LI67 103 aa6.33□□□□□ -1.4
COL27A1-203ENST00000468565 KRTAP10-5P60370 271 aa6.31□□□□□ -1.4
COL27A1-203ENST00000468565 LUZP6Q538Z0 58 aa6.25□□□□□ -1.41
COL27A1-203ENST00000468565 KRTAP4-9Q9BYQ8 210 aa6.19□□□□□ -1.42
COL27A1-203ENST00000468565 KRTAP4-7Q9BYR0 210 aa6.17□□□□□ -1.42
COL27A1-203ENST00000468565 C10orf95Q9H7T3 257 aa6.17□□□□□ -1.42
COL27A1-203ENST00000468565 PLAC4Q8WY50 150 aa6.11□□□□□ -1.43
COL27A1-203ENST00000468565 KRTAP4-11Q9BYQ6 195 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms