RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 CRCT1Q9UGL9 99 aa5.18□□□□□ -1.58
MSH5-212ENST00000467319 A8MUN3 132 aa5.17□□□□□ -1.58
MSH5-212ENST00000467319 TRAV7A0A075B6U4 112 aa5.16□□□□□ -1.58
MSH5-212ENST00000467319 LCE2BO14633 110 aa5.16□□□□□ -1.58
MSH5-212ENST00000467319 SMIM20Q8N5G0 67 aa5.16□□□□□ -1.58
MSH5-212ENST00000467319 CSAG1Q6PB30 78 aa5.15□□□□□ -1.59
MSH5-212ENST00000467319 DMAC1Q96GE9 116 aa5.1□□□□□ -1.59
MSH5-212ENST00000467319 NDUFC1O43677 76 aa5.06□□□□□ -1.6
MSH5-212ENST00000467319 KRTAP19-1Q8IUB9 90 aa5.05□□□□□ -1.6
MSH5-212ENST00000467319 SERP2Q8N6R1 65 aa5.05□□□□□ -1.6
MSH5-212ENST00000467319 H0YAA0 97 aa5.04□□□□□ -1.6
MSH5-212ENST00000467319 FCGBPQ9Y6R7 5405 aaPredicted RBP5.04□□□□□ -1.6
MSH5-212ENST00000467319 KRTAP9-7A8MTY7 169 aa5.02□□□□□ -1.61
MSH5-212ENST00000467319 SPRR2GQ9BYE4 73 aa5.01□□□□□ -1.61
MSH5-212ENST00000467319 SNURFQ9Y675 71 aa5.01□□□□□ -1.61
MSH5-212ENST00000467319 PCP4P48539 62 aa5□□□□□ -1.61
MSH5-212ENST00000467319 C20orf197Q8N268 126 aa5□□□□□ -1.61
MSH5-212ENST00000467319 KRTAP19-6Q3LI70 58 aa4.96□□□□□ -1.62
MSH5-212ENST00000467319 SPANXA2-OT1Q8N9U9 137 aa4.96□□□□□ -1.62
MSH5-212ENST00000467319 CRIPTQ9P021 101 aa4.96□□□□□ -1.62
MSH5-212ENST00000467319 KRTAP19-8Q3LI54 63 aa4.95□□□□□ -1.62
MSH5-212ENST00000467319 ACYP2P14621 99 aa4.94□□□□□ -1.62
MSH5-212ENST00000467319 COX7CP15954 63 aa4.94□□□□□ -1.62
MSH5-212ENST00000467319 MT1BP07438 61 aa4.93□□□□□ -1.62
MSH5-212ENST00000467319 ADM2Q7Z4H4 148 aa4.92□□□□□ -1.62
MSH5-212ENST00000467319 Q5VV11 94 aa4.89□□□□□ -1.63
MSH5-212ENST00000467319 KRTAP3-2Q9BYR7 98 aa4.89□□□□□ -1.63
MSH5-212ENST00000467319 CYSTM1Q9H1C7 97 aa4.88□□□□□ -1.63
MSH5-212ENST00000467319 P0C880 135 aa4.87□□□□□ -1.63
MSH5-212ENST00000467319 H7BZZ5 65 aa4.86□□□□□ -1.63
MSH5-212ENST00000467319 MACF1Q9UPN3 7388 aaKnown RBP4.85□□□□□ -1.63
MSH5-212ENST00000467319 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.84□□□□□ -1.63
MSH5-212ENST00000467319 CHKB-CPT1BH3BT56 60 aa4.84□□□□□ -1.63
MSH5-212ENST00000467319 SPTSSBQ8NFR3 76 aa4.84□□□□□ -1.63
MSH5-212ENST00000467319 ANAPC13Q9BS18 74 aa4.84□□□□□ -1.63
MSH5-212ENST00000467319 COA5Q86WW8 74 aa4.8□□□□□ -1.64
MSH5-212ENST00000467319 R4GN34 69 aa4.78□□□□□ -1.64
MSH5-212ENST00000467319 KRTAP10-5P60370 271 aa4.77□□□□□ -1.65
MSH5-212ENST00000467319 SYNE2Q8WXH0 6885 aaKnown RBP4.76□□□□□ -1.65
MSH5-212ENST00000467319 CCDC179H3BU77 68 aa4.75□□□□□ -1.65
MSH5-212ENST00000467319 M0QZ58 72 aa4.75□□□□□ -1.65
MSH5-212ENST00000467319 A6NN06 94 aa4.74□□□□□ -1.65
MSH5-212ENST00000467319 MT1XP80297 61 aa4.67□□□□□ -1.66
MSH5-212ENST00000467319 SVIPQ8NHG7 77 aa4.67□□□□□ -1.66
MSH5-212ENST00000467319 ATP5EP56381 51 aaPredicted RBP4.66□□□□□ -1.66
MSH5-212ENST00000467319 LINC01554Q52M75 96 aa4.65□□□□□ -1.67
MSH5-212ENST00000467319 KRTAP13-4Q3LI77 160 aa4.64□□□□□ -1.67
MSH5-212ENST00000467319 PLAC4Q8WY50 150 aa4.64□□□□□ -1.67
MSH5-212ENST00000467319 PRO2289Q9P1D8 64 aa4.61□□□□□ -1.67
MSH5-212ENST00000467319 TMEM258P61165 79 aa4.6□□□□□ -1.67
MSH5-212ENST00000467319 SEC61GP60059 68 aa4.58□□□□□ -1.68
MSH5-212ENST00000467319 KRTAP6-3Q3LI67 103 aa4.58□□□□□ -1.68
MSH5-212ENST00000467319 SERP1Q9Y6X1 66 aa4.57□□□□□ -1.68
MSH5-212ENST00000467319 KMT2DO14686 5537 aa4.54□□□□□ -1.68
MSH5-212ENST00000467319 NEBP20929 6669 aa4.53□□□□□ -1.68
MSH5-212ENST00000467319 KRTAP12-2P59991 146 aa4.53□□□□□ -1.68
MSH5-212ENST00000467319 MUC12Q9UKN1 5478 aa4.52□□□□□ -1.69
MSH5-212ENST00000467319 A0A1B0GU33 70 aa4.52□□□□□ -1.69
MSH5-212ENST00000467319 A0A1B0GU69 56 aa4.51□□□□□ -1.69
MSH5-212ENST00000467319 SPATA8Q6RVD6 105 aa4.49□□□□□ -1.69
MSH5-212ENST00000467319 KRTAP5-9P26371 169 aa4.48□□□□□ -1.69
MSH5-212ENST00000467319 MDN1Q9NU22 5596 aa4.46□□□□□ -1.7
MSH5-212ENST00000467319 LINC01558Q9Y6Z2 57 aa4.46□□□□□ -1.7
MSH5-212ENST00000467319 A0A0D9SG42 100 aa4.45□□□□□ -1.7
MSH5-212ENST00000467319 KRTAP12-1P59990 96 aa4.43□□□□□ -1.7
MSH5-212ENST00000467319 KRTAP10-7P60409 375 aaPredicted RBP4.43□□□□□ -1.7
MSH5-212ENST00000467319 KRTAP10-12P60413 245 aa4.43□□□□□ -1.7
MSH5-212ENST00000467319 PRR15LQ9BU68 103 aa4.42□□□□□ -1.7
MSH5-212ENST00000467319 RPS28P62857 69 aaKnown RBP4.41□□□□□ -1.7
MSH5-212ENST00000467319 CAMK2N1Q7Z7J9 78 aa4.41□□□□□ -1.7
MSH5-212ENST00000467319 SMIM26A0A096LP01 95 aa4.39□□□□□ -1.71
MSH5-212ENST00000467319 A8MU10 97 aa4.38□□□□□ -1.71
MSH5-212ENST00000467319 KRTAP8-1Q8IUC2 63 aa4.37□□□□□ -1.71
MSH5-212ENST00000467319 KRTAP4-8A0A0G2JLE6 195 aa4.36□□□□□ -1.71
MSH5-212ENST00000467319 KRTAP4-8Q9BYQ9 185 aa4.36□□□□□ -1.71
MSH5-212ENST00000467319 KRTAP20-1Q3LI63 56 aa4.35□□□□□ -1.71
MSH5-212ENST00000467319 SPINT4Q6UDR6 99 aa4.35□□□□□ -1.71
MSH5-212ENST00000467319 SPRR2FQ96RM1 72 aa4.33□□□□□ -1.72
MSH5-212ENST00000467319 UQCR11O14957 56 aa4.29□□□□□ -1.72
MSH5-212ENST00000467319 Q1T7F1 81 aa4.29□□□□□ -1.72
MSH5-212ENST00000467319 V9GYY9 64 aa4.28□□□□□ -1.72
MSH5-212ENST00000467319 PSPHP1O15172 72 aa4.23□□□□□ -1.73
MSH5-212ENST00000467319 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
MSH5-212ENST00000467319 SPRR2EP22531 72 aa4.22□□□□□ -1.73
MSH5-212ENST00000467319 SPRR2BP35325 72 aa4.22□□□□□ -1.73
MSH5-212ENST00000467319 SPRR2AP35326 72 aa4.22□□□□□ -1.73
MSH5-212ENST00000467319 MIR22HGQ0VDD5 57 aa4.21□□□□□ -1.74
MSH5-212ENST00000467319 C10orf95Q9H7T3 257 aa4.2□□□□□ -1.74
MSH5-212ENST00000467319 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
MSH5-212ENST00000467319 MT1EP04732 61 aa4.12□□□□□ -1.75
MSH5-212ENST00000467319 TNP1P09430 55 aa4.12□□□□□ -1.75
MSH5-212ENST00000467319 A6NED7 52 aa4.09□□□□□ -1.75
MSH5-212ENST00000467319 SPRR2DP22532 72 aa4.08□□□□□ -1.76
MSH5-212ENST00000467319 KRTAP19-5Q3LI72 72 aa4.08□□□□□ -1.76
MSH5-212ENST00000467319 LCE3AQ5TA76 89 aa4.08□□□□□ -1.76
MSH5-212ENST00000467319 PRO0628Q9UI54 55 aa4.08□□□□□ -1.76
MSH5-212ENST00000467319 K7ERS5 55 aa4.06□□□□□ -1.76
MSH5-212ENST00000467319 KRTAP2-3P0C7H8 128 aa4.06□□□□□ -1.76
MSH5-212ENST00000467319 KRTAP2-4Q9BYR9 128 aa4.06□□□□□ -1.76
MSH5-212ENST00000467319 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 747.6 ms