RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.64□□□□□ -1.67
LSG1-206ENST00000466391 SPAG11AQ6PDA7 123 aa4.64□□□□□ -1.67
LSG1-206ENST00000466391 Q5W150 140 aa4.63□□□□□ -1.67
LSG1-206ENST00000466391 VPS13BQ7Z7G8 4022 aa4.62□□□□□ -1.67
LSG1-206ENST00000466391 PCOTHQ58A44 107 aa4.62□□□□□ -1.67
LSG1-206ENST00000466391 COA5Q86WW8 74 aa4.61□□□□□ -1.67
LSG1-206ENST00000466391 DYNC1H1Q14204 4646 aaKnown RBP4.6□□□□□ -1.67
LSG1-206ENST00000466391 KRTAP10-4P60372 401 aaPredicted RBP4.6□□□□□ -1.67
LSG1-206ENST00000466391 PRO0628Q9UI54 55 aa4.6□□□□□ -1.67
LSG1-206ENST00000466391 LINC00304Q8N9R0 145 aa4.59□□□□□ -1.67
LSG1-206ENST00000466391 HRES1P13985 223 aa4.56□□□□□ -1.68
LSG1-206ENST00000466391 DMAC1Q96GE9 116 aa4.56□□□□□ -1.68
LSG1-206ENST00000466391 PKHD1L1Q86WI1 4243 aa4.55□□□□□ -1.68
LSG1-206ENST00000466391 LINC01558Q9Y6Z2 57 aa4.55□□□□□ -1.68
LSG1-206ENST00000466391 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
LSG1-206ENST00000466391 ACYP2P14621 99 aa4.54□□□□□ -1.68
LSG1-206ENST00000466391 APOBP04114 4563 aaKnown RBP4.54□□□□□ -1.68
LSG1-206ENST00000466391 KIAA1109Q2LD37 5005 aa4.54□□□□□ -1.68
LSG1-206ENST00000466391 Q5VV11 94 aa4.53□□□□□ -1.68
LSG1-206ENST00000466391 PKHD1P08F94 4074 aa4.53□□□□□ -1.68
LSG1-206ENST00000466391 A8MUN3 132 aa4.52□□□□□ -1.69
LSG1-206ENST00000466391 PSPHP1O15172 72 aa4.51□□□□□ -1.69
LSG1-206ENST00000466391 BRK1Q8WUW1 75 aa4.51□□□□□ -1.69
LSG1-206ENST00000466391 SMR3BP02814 79 aaPredicted RBP4.5□□□□□ -1.69
LSG1-206ENST00000466391 C20orf166-AS1Q96NR2 134 aa4.5□□□□□ -1.69
LSG1-206ENST00000466391 A8MUU9 505 aa4.49□□□□□ -1.69
LSG1-206ENST00000466391 A8MU10 97 aa4.48□□□□□ -1.69
LSG1-206ENST00000466391 C7orf65Q6ZTY9 151 aa4.48□□□□□ -1.69
LSG1-206ENST00000466391 PRR15LQ9BU68 103 aa4.48□□□□□ -1.69
LSG1-206ENST00000466391 RETNLBQ9BQ08 111 aa4.45□□□□□ -1.7
LSG1-206ENST00000466391 CHKB-CPT1BH3BT56 60 aa4.44□□□□□ -1.7
LSG1-206ENST00000466391 FAT1Q14517 4588 aa4.44□□□□□ -1.7
LSG1-206ENST00000466391 ABCA13Q86UQ4 5058 aa4.44□□□□□ -1.7
LSG1-206ENST00000466391 KRTAP10-8P60410 259 aa4.43□□□□□ -1.7
LSG1-206ENST00000466391 FLG2Q5D862 2391 aaPredicted RBP4.42□□□□□ -1.7
LSG1-206ENST00000466391 CDC42SE1Q9NRR8 79 aa4.41□□□□□ -1.7
LSG1-206ENST00000466391 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.71
LSG1-206ENST00000466391 A6NED7 52 aa4.38□□□□□ -1.71
LSG1-206ENST00000466391 Q5VSD8 79 aa4.38□□□□□ -1.71
LSG1-206ENST00000466391 LCA10Q71F78 164 aa4.38□□□□□ -1.71
LSG1-206ENST00000466391 C9orf92A6NGG3 77 aa4.37□□□□□ -1.71
LSG1-206ENST00000466391 ATP11AUNQ6ZP68 121 aa4.37□□□□□ -1.71
LSG1-206ENST00000466391 HERC1Q15751 4861 aa4.37□□□□□ -1.71
LSG1-206ENST00000466391 HSPG2P98160 4391 aa4.36□□□□□ -1.71
LSG1-206ENST00000466391 TNXBP22105 4242 aa4.35□□□□□ -1.71
LSG1-206ENST00000466391 SPTSSBQ8NFR3 76 aa4.35□□□□□ -1.71
LSG1-206ENST00000466391 A0A1B0GU69 56 aa4.34□□□□□ -1.71
LSG1-206ENST00000466391 SPINK7P58062 85 aa4.34□□□□□ -1.71
LSG1-206ENST00000466391 FAT3Q8TDW7 4589 aa4.32□□□□□ -1.72
LSG1-206ENST00000466391 DMBT1Q9UGM3 2413 aaPredicted RBP4.32□□□□□ -1.72
LSG1-206ENST00000466391 RPL37P61927 97 aaKnown RBP4.31□□□□□ -1.72
LSG1-206ENST00000466391 KRTAP12-2P59991 146 aa4.3□□□□□ -1.72
LSG1-206ENST00000466391 SPATA8Q6RVD6 105 aa4.3□□□□□ -1.72
LSG1-206ENST00000466391 COX6B2Q6YFQ2 88 aa4.3□□□□□ -1.72
LSG1-206ENST00000466391 MT1HL1P0DM35 61 aa4.29□□□□□ -1.72
LSG1-206ENST00000466391 A6NN06 94 aa4.28□□□□□ -1.72
LSG1-206ENST00000466391 UQCR11O14957 56 aa4.28□□□□□ -1.72
LSG1-206ENST00000466391 PMAIP1Q13794 54 aa4.28□□□□□ -1.72
LSG1-206ENST00000466391 SEC61GP60059 68 aa4.25□□□□□ -1.73
LSG1-206ENST00000466391 LRP1Q07954 4544 aaKnown RBP4.25□□□□□ -1.73
LSG1-206ENST00000466391 MIR22HGQ0VDD5 57 aa4.24□□□□□ -1.73
LSG1-206ENST00000466391 UBR4Q5T4S7 5183 aa4.22□□□□□ -1.73
LSG1-206ENST00000466391 KTN1-AS1Q86SY8 53 aa4.22□□□□□ -1.73
LSG1-206ENST00000466391 TPRXLQ17RH7 258 aa4.21□□□□□ -1.74
LSG1-206ENST00000466391 MYCBP2O75592 4640 aa4.17□□□□□ -1.74
LSG1-206ENST00000466391 H1FX-AS1Q4G0G2 97 aa4.15□□□□□ -1.75
LSG1-206ENST00000466391 A0A1B0GU33 70 aa4.14□□□□□ -1.75
LSG1-206ENST00000466391 H0YAA0 97 aa4.13□□□□□ -1.75
LSG1-206ENST00000466391 S4R3F8 94 aa4.12□□□□□ -1.75
LSG1-206ENST00000466391 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.75
LSG1-206ENST00000466391 HMCN2Q8NDA2 5059 aa4.08□□□□□ -1.76
LSG1-206ENST00000466391 RBM12B-AS1Q9P1G2 102 aa4.06□□□□□ -1.76
LSG1-206ENST00000466391 K7ERS5 55 aa4□□□□□ -1.77
LSG1-206ENST00000466391 CSAG1Q6PB30 78 aa4□□□□□ -1.77
LSG1-206ENST00000466391 LRP2P98164 4655 aa3.99□□□□□ -1.77
LSG1-206ENST00000466391 P0C880 135 aa3.97□□□□□ -1.77
LSG1-206ENST00000466391 KRTAP13-4Q3LI77 160 aa3.97□□□□□ -1.77
LSG1-206ENST00000466391 RNF213Q63HN8 5207 aa3.96□□□□□ -1.78
LSG1-206ENST00000466391 ADM2Q7Z4H4 148 aa3.96□□□□□ -1.78
LSG1-206ENST00000466391 MUC17Q685J3 4493 aa3.95□□□□□ -1.78
LSG1-206ENST00000466391 M0QZ58 72 aa3.94□□□□□ -1.78
LSG1-206ENST00000466391 KRTAP19-2Q3LHN2 52 aa3.9□□□□□ -1.79
LSG1-206ENST00000466391 KRTAP4-1Q9BYQ7 146 aa3.9□□□□□ -1.79
LSG1-206ENST00000466391 LPAP08519 4548 aa3.9□□□□□ -1.79
LSG1-206ENST00000466391 ROMO1P60602 79 aa3.89□□□□□ -1.79
LSG1-206ENST00000466391 LCE3AQ5TA76 89 aa3.89□□□□□ -1.79
LSG1-206ENST00000466391 KRTAP25-1Q3LHN0 102 aa3.87□□□□□ -1.79
LSG1-206ENST00000466391 LINC01554Q52M75 96 aa3.87□□□□□ -1.79
LSG1-206ENST00000466391 KRTAP4-4Q9BYR3 166 aa3.87□□□□□ -1.79
LSG1-206ENST00000466391 A0A0D9SG42 100 aa3.86□□□□□ -1.79
LSG1-206ENST00000466391 KRTAP12-1P59990 96 aa3.86□□□□□ -1.79
LSG1-206ENST00000466391 KRTAP5-4Q6L8H1 288 aa3.83□□□□□ -1.8
LSG1-206ENST00000466391 R4GN34 69 aa3.79□□□□□ -1.8
LSG1-206ENST00000466391 FLGP20930 4061 aaPredicted RBP3.77□□□□□ -1.81
LSG1-206ENST00000466391 SPINT4Q6UDR6 99 aa3.76□□□□□ -1.81
LSG1-206ENST00000466391 CRIPTQ9P021 101 aa3.75□□□□□ -1.81
LSG1-206ENST00000466391 FAT4Q6V0I7 4981 aa3.73□□□□□ -1.81
LSG1-206ENST00000466391 MUC2Q02817 5179 aa3.72□□□□□ -1.81
LSG1-206ENST00000466391 FSIP2Q5CZC0 6907 aa3.67□□□□□ -1.82
LSG1-206ENST00000466391 CAMK2N1Q7Z7J9 78 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms