RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 AEBP2Q6ZN18 517 aaPredicted RBP31.58■■■□□ 2.65
LSG1-206ENST00000466391 CHIC1Q5VXU3 224 aa30.99■■■□□ 2.55
LSG1-206ENST00000466391 PHF23Q9BUL5 403 aaPredicted RBP27.29■■□□□ 1.96
LSG1-206ENST00000466391 SENP3Q9H4L4 574 aaPredicted RBP26.75■■□□□ 1.87
LSG1-206ENST00000466391 PLPPR3Q6T4P5 718 aa25.25■■□□□ 1.63
LSG1-206ENST00000466391 FOXD1Q16676 465 aa24.83■■□□□ 1.57
LSG1-206ENST00000466391 ADRA2BP18089 450 aa24.05■■□□□ 1.44
LSG1-206ENST00000466391 PPP6R1Q9UPN7 881 aa24.05■■□□□ 1.44
LSG1-206ENST00000466391 PIAS4Q8N2W9 510 aaPredicted RBP23.48■■□□□ 1.35
LSG1-206ENST00000466391 MSH5O43196 834 aa22.8■■□□□ 1.24
LSG1-206ENST00000466391 PPP4R3CPQ6ZMV5 832 aa22.29■■□□□ 1.16
LSG1-206ENST00000466391 KCNA4P22459 653 aa21.99■■□□□ 1.11
LSG1-206ENST00000466391 SCAF1Q9H7N4 1312 aaKnown RBP21.97■■□□□ 1.11
LSG1-206ENST00000466391 MAPK8IP2Q13387 824 aaPredicted RBP21.78■■□□□ 1.08
LSG1-206ENST00000466391 NCBP3Q53F19 620 aaKnown RBP21.75■■□□□ 1.07
LSG1-206ENST00000466391 CNKSR2Q8WXI2 1034 aa21.61■■□□□ 1.05
LSG1-206ENST00000466391 NPM3O75607 178 aaKnown RBP21.44■■□□□ 1.02
LSG1-206ENST00000466391 DMRT2Q9Y5R5 561 aa21.38■■□□□ 1.01
LSG1-206ENST00000466391 RNF216Q9NWF9 866 aaPredicted RBP21.13■□□□□ 0.97
LSG1-206ENST00000466391 HOXD11P31277 338 aaPredicted RBP20.99■□□□□ 0.95
LSG1-206ENST00000466391 SLC4A1APQ9BWU0 796 aaKnown RBP20.97■□□□□ 0.95
LSG1-206ENST00000466391 DNAJC5BQ9UF47 199 aa20.68■□□□□ 0.9
LSG1-206ENST00000466391 EHMT2Q96KQ7 1210 aa20.62■□□□□ 0.89
LSG1-206ENST00000466391 DCAF8L1A6NGE4 600 aa20.54■□□□□ 0.88
LSG1-206ENST00000466391 POTEDQ86YR6 584 aa20.49■□□□□ 0.87
LSG1-206ENST00000466391 CSRNP3Q8WYN3 585 aa20.25■□□□□ 0.83
LSG1-206ENST00000466391 ZBTB22O15209 634 aa20.23■□□□□ 0.83
LSG1-206ENST00000466391 SLC4A2P04920 1241 aa20.2■□□□□ 0.82
LSG1-206ENST00000466391 FOXD4L1Q9NU39 408 aa20.16■□□□□ 0.82
LSG1-206ENST00000466391 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.07■□□□□ 0.89e-6■□□□□ 10.7
LSG1-206ENST00000466391 MYCNP04198 464 aaPredicted RBP19.79■□□□□ 0.76
LSG1-206ENST00000466391 U3KPZ7 1027 aaPredicted RBP19.74■□□□□ 0.75
LSG1-206ENST00000466391 RNF39Q9H2S5 420 aa19.56■□□□□ 0.72
LSG1-206ENST00000466391 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.52■□□□□ 0.72
LSG1-206ENST00000466391 HNRNPUL2Q1KMD3 747 aaKnown RBP19.52■□□□□ 0.72
LSG1-206ENST00000466391 SAMD1Q6SPF0 538 aaPredicted RBP19.47■□□□□ 0.71
LSG1-206ENST00000466391 ATXN8OSP0DMR3 200 aa19.41■□□□□ 0.7
LSG1-206ENST00000466391 C1QBPQ07021 282 aaKnown RBP19.33■□□□□ 0.68
LSG1-206ENST00000466391 ATF5Q9Y2D1 282 aaPredicted RBP19.29■□□□□ 0.68
LSG1-206ENST00000466391 APLP2Q06481 763 aa19.28■□□□□ 0.68
LSG1-206ENST00000466391 SPINK5Q9NQ38 1064 aaPredicted RBP19.16■□□□□ 0.66
LSG1-206ENST00000466391 CAPN15O75808 1086 aa19.09■□□□□ 0.65
LSG1-206ENST00000466391 TRHP20396 242 aaPredicted RBP19.05■□□□□ 0.64
LSG1-206ENST00000466391 ZNF219Q9P2Y4 722 aaPredicted RBP18.99■□□□□ 0.63
LSG1-206ENST00000466391 CACNB1Q02641 598 aaPredicted RBP18.97■□□□□ 0.63
LSG1-206ENST00000466391 ABCB7O75027 752 aa18.76■□□□□ 0.59
LSG1-206ENST00000466391 POLA2Q14181 598 aa18.76■□□□□ 0.59
LSG1-206ENST00000466391 DSG3P32926 999 aa18.68■□□□□ 0.58
LSG1-206ENST00000466391 FBLN2P98095 1184 aa18.46■□□□□ 0.55
LSG1-206ENST00000466391 MKRN4PQ13434 485 aaPredicted RBP18.43■□□□□ 0.54
LSG1-206ENST00000466391 ZBTB12Q9Y330 459 aaPredicted RBP18.41■□□□□ 0.54
LSG1-206ENST00000466391 FKBP8Q14318 412 aa18.33■□□□□ 0.52
LSG1-206ENST00000466391 SPDYE4A6NLX3 237 aa18.12■□□□□ 0.49
LSG1-206ENST00000466391 OSCARQ8IYS5 282 aa18.12■□□□□ 0.49
LSG1-206ENST00000466391 SPDYE2BA6NHP3 402 aa17.94■□□□□ 0.46
LSG1-206ENST00000466391 SPDYE6P0CI01 402 aa17.94■□□□□ 0.46
LSG1-206ENST00000466391 SPDYE2Q495Y8 402 aa17.94■□□□□ 0.46
LSG1-206ENST00000466391 ZNF692Q9BU19 519 aaPredicted RBP17.94■□□□□ 0.46
LSG1-206ENST00000466391 SSUH2Q9Y2M2 353 aa17.81■□□□□ 0.44
LSG1-206ENST00000466391 RBM42Q9BTD8 480 aaKnown RBP17.79■□□□□ 0.44
LSG1-206ENST00000466391 PROM2Q8N271 834 aa17.78■□□□□ 0.44
LSG1-206ENST00000466391 NISCHQ9Y2I1 1504 aa17.72■□□□□ 0.43
LSG1-206ENST00000466391 PABPN1Q86U42 306 aaKnown RBP eCLIP17.71■□□□□ 0.43
LSG1-206ENST00000466391 AKT1S1Q96B36 256 aa17.61■□□□□ 0.41
LSG1-206ENST00000466391 FBXO3Q9UK99 471 aa17.59■□□□□ 0.41
LSG1-206ENST00000466391 REM2Q8IYK8 340 aaPredicted RBP17.46■□□□□ 0.39
LSG1-206ENST00000466391 STAG3Q9UJ98 1225 aa17.41■□□□□ 0.38
LSG1-206ENST00000466391 SPDYE1Q8NFV5 336 aaPredicted RBP17.39■□□□□ 0.37
LSG1-206ENST00000466391 VASPP50552 380 aaPredicted RBP17.35■□□□□ 0.37
LSG1-206ENST00000466391 CLEC11AQ9Y240 323 aa17.35■□□□□ 0.37
LSG1-206ENST00000466391 PITPNM1O00562 1244 aa17.27■□□□□ 0.36
LSG1-206ENST00000466391 PRR29P0C7W0 189 aa17.19■□□□□ 0.34
LSG1-206ENST00000466391 MIER1Q8N108 512 aa17.19■□□□□ 0.34
LSG1-206ENST00000466391 PLCD3Q8N3E9 789 aa17.19■□□□□ 0.34
LSG1-206ENST00000466391 IFNLR1Q8IU57 520 aaPredicted RBP17.14■□□□□ 0.33
LSG1-206ENST00000466391 PLEKHG5O94827 1062 aa17.07■□□□□ 0.32
LSG1-206ENST00000466391 KLHL34Q8N239 644 aa17.07■□□□□ 0.32
LSG1-206ENST00000466391 CHRDL2Q6WN34 429 aa17■□□□□ 0.31
LSG1-206ENST00000466391 CREBZFQ9NS37 354 aa16.99■□□□□ 0.31
LSG1-206ENST00000466391 AMER1Q5JTC6 1135 aaPredicted RBP16.97■□□□□ 0.31
LSG1-206ENST00000466391 RTN4Q9NQC3 1192 aaKnown RBP16.96■□□□□ 0.31
LSG1-206ENST00000466391 ZBTB47Q9UFB7 747 aaPredicted RBP16.93■□□□□ 0.3
LSG1-206ENST00000466391 SPOCK2Q92563 424 aa16.91■□□□□ 0.3
LSG1-206ENST00000466391 CHADLQ6NUI6 762 aa16.9■□□□□ 0.3
LSG1-206ENST00000466391 FXR2P51116 673 aaKnown RBP eCLIP16.88■□□□□ 0.29
LSG1-206ENST00000466391 PRKAR2AP13861 404 aaKnown RBP16.84■□□□□ 0.29
LSG1-206ENST00000466391 PIP4P2Q8N4L2 257 aa16.83■□□□□ 0.28
LSG1-206ENST00000466391 MNX1P50219 401 aaPredicted RBP16.82■□□□□ 0.28
LSG1-206ENST00000466391 FARP1Q9Y4F1 1045 aaPredicted RBP16.73■□□□□ 0.27
LSG1-206ENST00000466391 NPM1P06748 294 aaKnown RBP eCLIP16.72■□□□□ 0.27
LSG1-206ENST00000466391 NUBP1P53384 320 aa16.69■□□□□ 0.26
LSG1-206ENST00000466391 CIZ1Q9ULV3 898 aaPredicted RBP16.66■□□□□ 0.26
LSG1-206ENST00000466391 PKD2Q13563 968 aa16.62■□□□□ 0.25
LSG1-206ENST00000466391 DCAF8Q5TAQ9 597 aa16.6■□□□□ 0.25
LSG1-206ENST00000466391 RASEFQ8IZ41 740 aa16.6■□□□□ 0.25
LSG1-206ENST00000466391 FAM212AQ96EL1 285 aa16.57■□□□□ 0.24
LSG1-206ENST00000466391 GSE1Q14687 1217 aa16.55■□□□□ 0.24
LSG1-206ENST00000466391 ECM2O94769 699 aaPredicted RBP16.52■□□□□ 0.24
LSG1-206ENST00000466391 TSPYL2Q9H2G4 693 aaPredicted RBP16.5■□□□□ 0.23
LSG1-206ENST00000466391 TRIM41Q8WV44 630 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms