RNA–Protein interactions for RNA: ENST00000466101.1

CCNL1-208, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 911 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-208ENST00000466101 USH2AO75445 5202 aa7.87□□□□□ -1.15
CCNL1-208ENST00000466101 IMUPQ9GZP8 106 aa7.84□□□□□ -1.15
CCNL1-208ENST00000466101 FAM236AA0A1B0GUQ0 79 aa7.82□□□□□ -1.16
CCNL1-208ENST00000466101 FAM236BA0A1B0GV22 79 aa7.82□□□□□ -1.16
CCNL1-208ENST00000466101 H3BPC8 53 aa7.79□□□□□ -1.16
CCNL1-208ENST00000466101 A8MUN3 132 aa7.75□□□□□ -1.17
CCNL1-208ENST00000466101 SSPOA2VEC9 5147 aa7.74□□□□□ -1.17
CCNL1-208ENST00000466101 NDUFC1O43677 76 aa7.73□□□□□ -1.17
CCNL1-208ENST00000466101 KRTAP19-1Q8IUB9 90 aa7.73□□□□□ -1.17
CCNL1-208ENST00000466101 TRAV7A0A075B6U4 112 aa7.7□□□□□ -1.18
CCNL1-208ENST00000466101 SMIM20Q8N5G0 67 aa7.69□□□□□ -1.18
CCNL1-208ENST00000466101 DMAC1Q96GE9 116 aa7.63□□□□□ -1.19
CCNL1-208ENST00000466101 KRTAP19-6Q3LI70 58 aa7.59□□□□□ -1.19
CCNL1-208ENST00000466101 SPRR2GQ9BYE4 73 aa7.58□□□□□ -1.2
CCNL1-208ENST00000466101 SNURFQ9Y675 71 aa7.57□□□□□ -1.2
CCNL1-208ENST00000466101 FCGBPQ9Y6R7 5405 aaPredicted RBP7.56□□□□□ -1.2
CCNL1-208ENST00000466101 H0YAA0 97 aa7.56□□□□□ -1.2
CCNL1-208ENST00000466101 ADM2Q7Z4H4 148 aa7.55□□□□□ -1.2
CCNL1-208ENST00000466101 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.53□□□□□ -1.2
CCNL1-208ENST00000466101 Q5VV11 94 aa7.52□□□□□ -1.21
CCNL1-208ENST00000466101 MT1BP07438 61 aa7.51□□□□□ -1.21
CCNL1-208ENST00000466101 KRTAP19-8Q3LI54 63 aa7.51□□□□□ -1.21
CCNL1-208ENST00000466101 SERP2Q8N6R1 65 aa7.51□□□□□ -1.21
CCNL1-208ENST00000466101 CRIPTQ9P021 101 aa7.51□□□□□ -1.21
CCNL1-208ENST00000466101 C20orf197Q8N268 126 aa7.5□□□□□ -1.21
CCNL1-208ENST00000466101 ACYP2P14621 99 aa7.49□□□□□ -1.21
CCNL1-208ENST00000466101 KRTAP4-8Q9BYQ9 185 aa7.49□□□□□ -1.21
CCNL1-208ENST00000466101 P0C880 135 aa7.41□□□□□ -1.22
CCNL1-208ENST00000466101 CHKB-CPT1BH3BT56 60 aa7.39□□□□□ -1.23
CCNL1-208ENST00000466101 KRTAP9-7A8MTY7 169 aa7.38□□□□□ -1.23
CCNL1-208ENST00000466101 SPANXA2-OT1Q8N9U9 137 aa7.37□□□□□ -1.23
CCNL1-208ENST00000466101 A6NN06 94 aa7.36□□□□□ -1.23
CCNL1-208ENST00000466101 SPTSSBQ8NFR3 76 aa7.35□□□□□ -1.23
CCNL1-208ENST00000466101 COX7CP15954 63 aa7.34□□□□□ -1.23
CCNL1-208ENST00000466101 R4GN34 69 aa7.33□□□□□ -1.24
CCNL1-208ENST00000466101 MACF1Q9UPN3 7388 aaKnown RBP7.31□□□□□ -1.24
CCNL1-208ENST00000466101 M0QZ58 72 aa7.3□□□□□ -1.24
CCNL1-208ENST00000466101 KRTAP10-5P60370 271 aa7.28□□□□□ -1.24
CCNL1-208ENST00000466101 CYSTM1Q9H1C7 97 aa7.24□□□□□ -1.25
CCNL1-208ENST00000466101 LINC01554Q52M75 96 aa7.21□□□□□ -1.26
CCNL1-208ENST00000466101 COA5Q86WW8 74 aa7.2□□□□□ -1.26
CCNL1-208ENST00000466101 ANAPC13Q9BS18 74 aa7.2□□□□□ -1.26
CCNL1-208ENST00000466101 PLAC4Q8WY50 150 aa7.19□□□□□ -1.26
CCNL1-208ENST00000466101 SYNE2Q8WXH0 6885 aaKnown RBP7.18□□□□□ -1.26
CCNL1-208ENST00000466101 H7BZZ5 65 aa7.18□□□□□ -1.26
CCNL1-208ENST00000466101 LCE3BQ5TA77 95 aa7.13□□□□□ -1.27
CCNL1-208ENST00000466101 MT1XP80297 61 aa7.09□□□□□ -1.27
CCNL1-208ENST00000466101 KRTAP6-3Q3LI67 103 aa7.08□□□□□ -1.28
CCNL1-208ENST00000466101 PRO2289Q9P1D8 64 aa7.08□□□□□ -1.28
CCNL1-208ENST00000466101 CCDC179H3BU77 68 aa7.07□□□□□ -1.28
CCNL1-208ENST00000466101 KRTAP13-4Q3LI77 160 aa7.01□□□□□ -1.29
CCNL1-208ENST00000466101 SEC61GP60059 68 aa6.99□□□□□ -1.29
CCNL1-208ENST00000466101 KRTAP4-12Q9BQ66 201 aa6.98□□□□□ -1.29
CCNL1-208ENST00000466101 KRTAP4-8A0A0G2JLE6 195 aa6.97□□□□□ -1.29
CCNL1-208ENST00000466101 SERP1Q9Y6X1 66 aa6.97□□□□□ -1.29
CCNL1-208ENST00000466101 KRTAP9-9Q9BYP9 154 aa6.96□□□□□ -1.3
CCNL1-208ENST00000466101 KRTAP9-4Q9BYQ2 154 aa6.96□□□□□ -1.3
CCNL1-208ENST00000466101 ATP5EP56381 51 aaPredicted RBP6.86□□□□□ -1.31
CCNL1-208ENST00000466101 SPATA8Q6RVD6 105 aa6.86□□□□□ -1.31
CCNL1-208ENST00000466101 A0A0D9SG42 100 aa6.85□□□□□ -1.31
CCNL1-208ENST00000466101 A0A1B0GU33 70 aa6.85□□□□□ -1.31
CCNL1-208ENST00000466101 KRTAP12-2P59991 146 aa6.84□□□□□ -1.31
CCNL1-208ENST00000466101 A0A1B0GU69 56 aa6.83□□□□□ -1.32
CCNL1-208ENST00000466101 KRTAP5-9P26371 169 aa6.83□□□□□ -1.32
CCNL1-208ENST00000466101 KMT2DO14686 5537 aa6.8□□□□□ -1.32
CCNL1-208ENST00000466101 KRTAP10-7P60409 375 aaPredicted RBP6.79□□□□□ -1.32
CCNL1-208ENST00000466101 CAMK2N1Q7Z7J9 78 aa6.78□□□□□ -1.32
CCNL1-208ENST00000466101 KRTAP8-1Q8IUC2 63 aa6.77□□□□□ -1.33
CCNL1-208ENST00000466101 KRTAP4-7Q9BYR0 210 aa6.77□□□□□ -1.33
CCNL1-208ENST00000466101 TMEM258P61165 79 aa6.76□□□□□ -1.33
CCNL1-208ENST00000466101 MUC12Q9UKN1 5478 aa6.74□□□□□ -1.33
CCNL1-208ENST00000466101 SPINT4Q6UDR6 99 aa6.73□□□□□ -1.33
CCNL1-208ENST00000466101 SPRR2FQ96RM1 72 aa6.73□□□□□ -1.33
CCNL1-208ENST00000466101 KRTAP10-12P60413 245 aa6.72□□□□□ -1.33
CCNL1-208ENST00000466101 NEBP20929 6669 aa6.7□□□□□ -1.34
CCNL1-208ENST00000466101 KRTAP12-1P59990 96 aa6.67□□□□□ -1.34
CCNL1-208ENST00000466101 LCE1DQ5T752 114 aa6.67□□□□□ -1.34
CCNL1-208ENST00000466101 PRR15LQ9BU68 103 aa6.66□□□□□ -1.34
CCNL1-208ENST00000466101 A8MU10 97 aa6.65□□□□□ -1.34
CCNL1-208ENST00000466101 LINC01558Q9Y6Z2 57 aa6.65□□□□□ -1.34
CCNL1-208ENST00000466101 SMIM26A0A096LP01 95 aa6.64□□□□□ -1.35
CCNL1-208ENST00000466101 SPRR2EP22531 72 aa6.59□□□□□ -1.35
CCNL1-208ENST00000466101 SPRR2BP35325 72 aa6.59□□□□□ -1.35
CCNL1-208ENST00000466101 SPRR2AP35326 72 aa6.59□□□□□ -1.35
CCNL1-208ENST00000466101 MDN1Q9NU22 5596 aa6.58□□□□□ -1.36
CCNL1-208ENST00000466101 KRTAP4-9Q9BYQ8 210 aa6.51□□□□□ -1.37
CCNL1-208ENST00000466101 LCE1AQ5T7P2 110 aa6.5□□□□□ -1.37
CCNL1-208ENST00000466101 KRTAP20-1Q3LI63 56 aa6.49□□□□□ -1.37
CCNL1-208ENST00000466101 KRTAP4-2Q9BYR5 136 aa6.46□□□□□ -1.38
CCNL1-208ENST00000466101 UQCR11O14957 56 aa6.45□□□□□ -1.38
CCNL1-208ENST00000466101 C10orf95Q9H7T3 257 aa6.37□□□□□ -1.39
CCNL1-208ENST00000466101 PSPHP1O15172 72 aa6.36□□□□□ -1.39
CCNL1-208ENST00000466101 SPRR2DP22532 72 aa6.36□□□□□ -1.39
CCNL1-208ENST00000466101 KRTAP2-3P0C7H8 128 aa6.35□□□□□ -1.39
CCNL1-208ENST00000466101 KRTAP2-4Q9BYR9 128 aa6.35□□□□□ -1.39
CCNL1-208ENST00000466101 V9GYY9 64 aa6.35□□□□□ -1.39
CCNL1-208ENST00000466101 MIR22HGQ0VDD5 57 aa6.34□□□□□ -1.39
CCNL1-208ENST00000466101 Q1T7F1 81 aa6.33□□□□□ -1.4
CCNL1-208ENST00000466101 KRTAP19-7Q3SYF9 63 aa6.33□□□□□ -1.4
CCNL1-208ENST00000466101 PCP4P48539 62 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms