RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 M0R2T5 61 aa5.38□□□□□ -1.55
VCP-204ENST00000466100 NDUFC1O43677 76 aa5.38□□□□□ -1.55
VCP-204ENST00000466100 KRTAP10-6P60371 365 aaPredicted RBP5.38□□□□□ -1.55
VCP-204ENST00000466100 LCA10Q71F78 164 aa5.38□□□□□ -1.55
VCP-204ENST00000466100 S4R3F8 94 aa5.38□□□□□ -1.55
VCP-204ENST00000466100 LORP23490 312 aaPredicted RBP5.37□□□□□ -1.55
VCP-204ENST00000466100 ACYP2P14621 99 aa5.31□□□□□ -1.56
VCP-204ENST00000466100 KRTAP9-8Q9BYQ0 159 aa5.31□□□□□ -1.56
VCP-204ENST00000466100 CSAG1Q6PB30 78 aa5.28□□□□□ -1.56
VCP-204ENST00000466100 MT2AP02795 61 aa5.27□□□□□ -1.57
VCP-204ENST00000466100 MT1FP04733 61 aa5.23□□□□□ -1.57
VCP-204ENST00000466100 PCP4P48539 62 aa5.23□□□□□ -1.57
VCP-204ENST00000466100 ATP5EP56381 51 aaPredicted RBP5.22□□□□□ -1.57
VCP-204ENST00000466100 TMEM258P61165 79 aa5.22□□□□□ -1.57
VCP-204ENST00000466100 COA5Q86WW8 74 aa5.22□□□□□ -1.57
VCP-204ENST00000466100 CHKB-CPT1BH3BT56 60 aa5.19□□□□□ -1.58
VCP-204ENST00000466100 H0YAA0 97 aa5.18□□□□□ -1.58
VCP-204ENST00000466100 KRTAP10-10P60014 251 aa5.16□□□□□ -1.58
VCP-204ENST00000466100 SPTSSBQ8NFR3 76 aa5.15□□□□□ -1.59
VCP-204ENST00000466100 LOC100996750A0A140TA64 210 aa5.13□□□□□ -1.59
VCP-204ENST00000466100 KRTAP9-3Q9BYQ3 159 aa5.13□□□□□ -1.59
VCP-204ENST00000466100 KRTAP4-6Q9BYQ5 205 aa5.13□□□□□ -1.59
VCP-204ENST00000466100 ADM2Q7Z4H4 148 aa5.1□□□□□ -1.59
VCP-204ENST00000466100 P0C880 135 aa5.07□□□□□ -1.6
VCP-204ENST00000466100 SERP1Q9Y6X1 66 aa5.06□□□□□ -1.6
VCP-204ENST00000466100 KRTAP19-1Q8IUB9 90 aa5.05□□□□□ -1.6
VCP-204ENST00000466100 KRTAP9-2Q9BYQ4 174 aa5.04□□□□□ -1.6
VCP-204ENST00000466100 USH2AO75445 5202 aa5.04□□□□□ -1.6
VCP-204ENST00000466100 SPRR2GQ9BYE4 73 aa5.03□□□□□ -1.6
VCP-204ENST00000466100 CRIPTQ9P021 101 aa5.02□□□□□ -1.61
VCP-204ENST00000466100 FSIP2Q5CZC0 6907 aa4.96□□□□□ -1.62
VCP-204ENST00000466100 SSPOA2VEC9 5147 aa4.95□□□□□ -1.62
VCP-204ENST00000466100 KRTAP19-8Q3LI54 63 aa4.95□□□□□ -1.62
VCP-204ENST00000466100 LINC01558Q9Y6Z2 57 aa4.94□□□□□ -1.62
VCP-204ENST00000466100 SEC61GP60059 68 aa4.93□□□□□ -1.62
VCP-204ENST00000466100 R4GN34 69 aa4.93□□□□□ -1.62
VCP-204ENST00000466100 M0QZ58 72 aa4.92□□□□□ -1.62
VCP-204ENST00000466100 RPS28P62857 69 aaKnown RBP4.92□□□□□ -1.62
VCP-204ENST00000466100 A0A1B0GU69 56 aa4.91□□□□□ -1.62
VCP-204ENST00000466100 MT1BP07438 61 aa4.91□□□□□ -1.62
VCP-204ENST00000466100 KRTAP13-4Q3LI77 160 aa4.9□□□□□ -1.63
VCP-204ENST00000466100 SMIM26A0A096LP01 95 aa4.87□□□□□ -1.63
VCP-204ENST00000466100 Q1T7F1 81 aa4.87□□□□□ -1.63
VCP-204ENST00000466100 Q5VV11 94 aa4.87□□□□□ -1.63
VCP-204ENST00000466100 A0A1B0GU33 70 aa4.86□□□□□ -1.63
VCP-204ENST00000466100 PRR15LQ9BU68 103 aa4.85□□□□□ -1.63
VCP-204ENST00000466100 V9GYY9 64 aa4.83□□□□□ -1.64
VCP-204ENST00000466100 CRCT1Q9UGL9 99 aa4.82□□□□□ -1.64
VCP-204ENST00000466100 LINC01554Q52M75 96 aa4.8□□□□□ -1.64
VCP-204ENST00000466100 SPATA8Q6RVD6 105 aa4.8□□□□□ -1.64
VCP-204ENST00000466100 KRTAP19-6Q3LI70 58 aa4.79□□□□□ -1.64
VCP-204ENST00000466100 A6NN06 94 aa4.78□□□□□ -1.64
VCP-204ENST00000466100 PSPHP1O15172 72 aa4.76□□□□□ -1.65
VCP-204ENST00000466100 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
VCP-204ENST00000466100 KRTAP9-6A0A140TA67 174 aa4.75□□□□□ -1.65
VCP-204ENST00000466100 PLAC4Q8WY50 150 aa4.73□□□□□ -1.65
VCP-204ENST00000466100 A0A0D9SG42 100 aa4.72□□□□□ -1.65
VCP-204ENST00000466100 UQCR11O14957 56 aa4.72□□□□□ -1.65
VCP-204ENST00000466100 A8MU10 97 aa4.71□□□□□ -1.66
VCP-204ENST00000466100 KRTAP10-5P60370 271 aa4.7□□□□□ -1.66
VCP-204ENST00000466100 KRTAP4-8Q9BYQ9 185 aa4.7□□□□□ -1.66
VCP-204ENST00000466100 KRTAP12-1P59990 96 aa4.69□□□□□ -1.66
VCP-204ENST00000466100 MT1XP80297 61 aa4.69□□□□□ -1.66
VCP-204ENST00000466100 KRTAP12-2P59991 146 aa4.65□□□□□ -1.67
VCP-204ENST00000466100 MIR22HGQ0VDD5 57 aa4.65□□□□□ -1.67
VCP-204ENST00000466100 A6NED7 52 aa4.61□□□□□ -1.67
VCP-204ENST00000466100 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.61□□□□□ -1.67
VCP-204ENST00000466100 SPINT4Q6UDR6 99 aa4.61□□□□□ -1.67
VCP-204ENST00000466100 PRO2289Q9P1D8 64 aa4.6□□□□□ -1.67
VCP-204ENST00000466100 CAMK2N1Q7Z7J9 78 aa4.57□□□□□ -1.68
VCP-204ENST00000466100 MACF1Q9UPN3 7388 aaKnown RBP4.55□□□□□ -1.68
VCP-204ENST00000466100 CDC42SE1Q9NRR8 79 aa4.51□□□□□ -1.69
VCP-204ENST00000466100 KRTAP4-12Q9BQ66 201 aa4.49□□□□□ -1.69
VCP-204ENST00000466100 KRTAP10-7P60409 375 aaPredicted RBP4.47□□□□□ -1.69
VCP-204ENST00000466100 LCE3BQ5TA77 95 aa4.45□□□□□ -1.7
VCP-204ENST00000466100 C10orf95Q9H7T3 257 aa4.45□□□□□ -1.7
VCP-204ENST00000466100 KMT2DO14686 5537 aa4.44□□□□□ -1.7
VCP-204ENST00000466100 K7ERS5 55 aa4.44□□□□□ -1.7
VCP-204ENST00000466100 KRTAP10-12P60413 245 aa4.44□□□□□ -1.7
VCP-204ENST00000466100 SYNE2Q8WXH0 6885 aaKnown RBP4.4□□□□□ -1.71
VCP-204ENST00000466100 KRTAP9-9Q9BYP9 154 aa4.38□□□□□ -1.71
VCP-204ENST00000466100 KRTAP9-4Q9BYQ2 154 aa4.38□□□□□ -1.71
VCP-204ENST00000466100 KRTAP4-8A0A0G2JLE6 195 aa4.35□□□□□ -1.71
VCP-204ENST00000466100 BRK1Q8WUW1 75 aa4.35□□□□□ -1.71
VCP-204ENST00000466100 TNP1P09430 55 aa4.32□□□□□ -1.72
VCP-204ENST00000466100 KRTAP9-7A8MTY7 169 aa4.31□□□□□ -1.72
VCP-204ENST00000466100 KRTAP6-3Q3LI67 103 aa4.3□□□□□ -1.72
VCP-204ENST00000466100 KRTAP5-9P26371 169 aa4.28□□□□□ -1.72
VCP-204ENST00000466100 KRTAP8-1Q8IUC2 63 aa4.28□□□□□ -1.72
VCP-204ENST00000466100 KRTAP25-1Q3LHN0 102 aa4.27□□□□□ -1.73
VCP-204ENST00000466100 ROMO1P60602 79 aa4.26□□□□□ -1.73
VCP-204ENST00000466100 MUC12Q9UKN1 5478 aa4.24□□□□□ -1.73
VCP-204ENST00000466100 LCE3AQ5TA76 89 aa4.23□□□□□ -1.73
VCP-204ENST00000466100 MDN1Q9NU22 5596 aa4.19□□□□□ -1.74
VCP-204ENST00000466100 KRTAP19-7Q3SYF9 63 aa4.19□□□□□ -1.74
VCP-204ENST00000466100 SPRR2FQ96RM1 72 aa4.19□□□□□ -1.74
VCP-204ENST00000466100 LCE1DQ5T752 114 aa4.18□□□□□ -1.74
VCP-204ENST00000466100 KRTAP4-7Q9BYR0 210 aa4.17□□□□□ -1.74
VCP-204ENST00000466100 KRTAP23-1A1A580 65 aa4.14□□□□□ -1.75
VCP-204ENST00000466100 KRTAP19-5Q3LI72 72 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms