RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 LCE2CQ5TA81 110 aa10.68□□□□□ -0.7
ITGA4-204ENST00000465522 LCA10Q71F78 164 aa10.68□□□□□ -0.7
ITGA4-204ENST00000465522 FLGP20930 4061 aaPredicted RBP10.68□□□□□ -0.7
ITGA4-204ENST00000465522 RPS28P62857 69 aaKnown RBP10.61□□□□□ -0.71
ITGA4-204ENST00000465522 KRTAP3-3Q9BYR6 98 aa10.61□□□□□ -0.71
ITGA4-204ENST00000465522 SPTSSBQ8NFR3 76 aa10.58□□□□□ -0.72
ITGA4-204ENST00000465522 FAT4Q6V0I7 4981 aa10.57□□□□□ -0.72
ITGA4-204ENST00000465522 CSAG1Q6PB30 78 aa10.53□□□□□ -0.72
ITGA4-204ENST00000465522 MT1HP80294 61 aa10.49□□□□□ -0.73
ITGA4-204ENST00000465522 M0R2T5 61 aa10.44□□□□□ -0.74
ITGA4-204ENST00000465522 SMIM26A0A096LP01 95 aa10.44□□□□□ -0.74
ITGA4-204ENST00000465522 LINC01558Q9Y6Z2 57 aa10.3□□□□□ -0.76
ITGA4-204ENST00000465522 Q1T7F1 81 aa10.29□□□□□ -0.76
ITGA4-204ENST00000465522 V9GYY9 64 aa10.28□□□□□ -0.76
ITGA4-204ENST00000465522 SEC61GP60059 68 aa10.27□□□□□ -0.77
ITGA4-204ENST00000465522 A0A1B0GU69 56 aa10.24□□□□□ -0.77
ITGA4-204ENST00000465522 H0YAA0 97 aa10.24□□□□□ -0.77
ITGA4-204ENST00000465522 LCE2AQ5TA79 106 aaPredicted RBP10.24□□□□□ -0.77
ITGA4-204ENST00000465522 ADM2Q7Z4H4 148 aa10.22□□□□□ -0.77
ITGA4-204ENST00000465522 PRR15LQ9BU68 103 aa10.18□□□□□ -0.78
ITGA4-204ENST00000465522 KRTAP3-2Q9BYR7 98 aa10.16□□□□□ -0.78
ITGA4-204ENST00000465522 KRTAP10-6P60371 365 aaPredicted RBP10.15□□□□□ -0.78
ITGA4-204ENST00000465522 PSPHP1O15172 72 aa10.13□□□□□ -0.79
ITGA4-204ENST00000465522 P0C880 135 aa10.12□□□□□ -0.79
ITGA4-204ENST00000465522 LORP23490 312 aaPredicted RBP10.08□□□□□ -0.8
ITGA4-204ENST00000465522 KRTAP9-8Q9BYQ0 159 aa10.07□□□□□ -0.8
ITGA4-204ENST00000465522 MT2AP02795 61 aa10.02□□□□□ -0.8
ITGA4-204ENST00000465522 Q5VV11 94 aa10.02□□□□□ -0.81
ITGA4-204ENST00000465522 A0A1B0GU33 70 aa9.99□□□□□ -0.81
ITGA4-204ENST00000465522 KRTAP10-10P60014 251 aa9.98□□□□□ -0.81
ITGA4-204ENST00000465522 MT1FP04733 61 aa9.96□□□□□ -0.82
ITGA4-204ENST00000465522 R4GN34 69 aa9.9□□□□□ -0.83
ITGA4-204ENST00000465522 CRIPTQ9P021 101 aa9.89□□□□□ -0.83
ITGA4-204ENST00000465522 UQCR11O14957 56 aa9.88□□□□□ -0.83
ITGA4-204ENST00000465522 M0QZ58 72 aa9.86□□□□□ -0.83
ITGA4-204ENST00000465522 SPATA8Q6RVD6 105 aa9.84□□□□□ -0.83
ITGA4-204ENST00000465522 A6NED7 52 aa9.83□□□□□ -0.84
ITGA4-204ENST00000465522 KRTAP13-4Q3LI77 160 aa9.82□□□□□ -0.84
ITGA4-204ENST00000465522 MIR22HGQ0VDD5 57 aa9.75□□□□□ -0.85
ITGA4-204ENST00000465522 KRTAP9-3Q9BYQ3 159 aa9.72□□□□□ -0.85
ITGA4-204ENST00000465522 SPRR2GQ9BYE4 73 aa9.71□□□□□ -0.85
ITGA4-204ENST00000465522 LINC01554Q52M75 96 aa9.7□□□□□ -0.86
ITGA4-204ENST00000465522 KRTAP19-1Q8IUB9 90 aa9.7□□□□□ -0.86
ITGA4-204ENST00000465522 A0A0D9SG42 100 aa9.66□□□□□ -0.86
ITGA4-204ENST00000465522 A8MU10 97 aa9.65□□□□□ -0.87
ITGA4-204ENST00000465522 CDC42SE1Q9NRR8 79 aa9.6□□□□□ -0.87
ITGA4-204ENST00000465522 BRK1Q8WUW1 75 aa9.55□□□□□ -0.88
ITGA4-204ENST00000465522 A6NN06 94 aa9.48□□□□□ -0.89
ITGA4-204ENST00000465522 LCE2BO14633 110 aa9.48□□□□□ -0.89
ITGA4-204ENST00000465522 KRTAP19-8Q3LI54 63 aa9.48□□□□□ -0.89
ITGA4-204ENST00000465522 SPINT4Q6UDR6 99 aa9.47□□□□□ -0.89
ITGA4-204ENST00000465522 KRTAP12-1P59990 96 aa9.45□□□□□ -0.9
ITGA4-204ENST00000465522 KRTAP12-2P59991 146 aa9.42□□□□□ -0.9
ITGA4-204ENST00000465522 PLAC4Q8WY50 150 aa9.4□□□□□ -0.9
ITGA4-204ENST00000465522 LCE2DQ5TA82 110 aaPredicted RBP9.39□□□□□ -0.91
ITGA4-204ENST00000465522 K7ERS5 55 aa9.37□□□□□ -0.91
ITGA4-204ENST00000465522 MT1BP07438 61 aa9.37□□□□□ -0.91
ITGA4-204ENST00000465522 USH2AO75445 5202 aa9.26□□□□□ -0.93
ITGA4-204ENST00000465522 CAMK2N1Q7Z7J9 78 aa9.25□□□□□ -0.93
ITGA4-204ENST00000465522 PRO0628Q9UI54 55 aa9.2□□□□□ -0.94
ITGA4-204ENST00000465522 KRTAP9-2Q9BYQ4 174 aa9.15□□□□□ -0.94
ITGA4-204ENST00000465522 FSIP2Q5CZC0 6907 aa9.11□□□□□ -0.95
ITGA4-204ENST00000465522 PMAIP1Q13794 54 aa9.03□□□□□ -0.96
ITGA4-204ENST00000465522 MT1XP80297 61 aa9.02□□□□□ -0.97
ITGA4-204ENST00000465522 KRTAP10-5P60370 271 aa9□□□□□ -0.97
ITGA4-204ENST00000465522 PRO2289Q9P1D8 64 aa9□□□□□ -0.97
ITGA4-204ENST00000465522 SSPOA2VEC9 5147 aa9□□□□□ -0.97
ITGA4-204ENST00000465522 KRTAP19-6Q3LI70 58 aa8.96□□□□□ -0.98
ITGA4-204ENST00000465522 C10orf95Q9H7T3 257 aa8.95□□□□□ -0.98
ITGA4-204ENST00000465522 ROMO1P60602 79 aa8.92□□□□□ -0.98
ITGA4-204ENST00000465522 CRCT1Q9UGL9 99 aa8.8□□□□□ -1
ITGA4-204ENST00000465522 TNP1P09430 55 aa8.75□□□□□ -1.01
ITGA4-204ENST00000465522 KRTAP25-1Q3LHN0 102 aa8.69□□□□□ -1.02
ITGA4-204ENST00000465522 FCGBPQ9Y6R7 5405 aaPredicted RBP8.68□□□□□ -1.02
ITGA4-204ENST00000465522 KRTAP10-7P60409 375 aaPredicted RBP8.66□□□□□ -1.02
ITGA4-204ENST00000465522 KRTAP10-12P60413 245 aa8.56□□□□□ -1.04
ITGA4-204ENST00000465522 KTN1-AS1Q86SY8 53 aa8.54□□□□□ -1.04
ITGA4-204ENST00000465522 KRTAP9-6A0A140TA67 174 aa8.51□□□□□ -1.05
ITGA4-204ENST00000465522 PRAC1Q96KF2 57 aa8.45□□□□□ -1.06
ITGA4-204ENST00000465522 LCE3AQ5TA76 89 aa8.4□□□□□ -1.07
ITGA4-204ENST00000465522 KMT2DO14686 5537 aa8.4□□□□□ -1.07
ITGA4-204ENST00000465522 KRTAP23-1A1A580 65 aa8.39□□□□□ -1.07
ITGA4-204ENST00000465522 KRTAP4-8A0A0G2JLE6 195 aa8.38□□□□□ -1.07
ITGA4-204ENST00000465522 KRTAP4-8Q9BYQ9 185 aa8.38□□□□□ -1.07
ITGA4-204ENST00000465522 PP632Q6XCG6 107 aa8.34□□□□□ -1.07
ITGA4-204ENST00000465522 MACF1Q9UPN3 7388 aaKnown RBP8.33□□□□□ -1.08
ITGA4-204ENST00000465522 KRTAP8-1Q8IUC2 63 aa8.22□□□□□ -1.09
ITGA4-204ENST00000465522 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.14□□□□□ -1.11
ITGA4-204ENST00000465522 SYNE2Q8WXH0 6885 aaKnown RBP8.13□□□□□ -1.11
ITGA4-204ENST00000465522 KRTAP19-5Q3LI72 72 aa8.12□□□□□ -1.11
ITGA4-204ENST00000465522 SVIPQ8NHG7 77 aa8.1□□□□□ -1.11
ITGA4-204ENST00000465522 KRTAP12-3P60328 96 aa8.08□□□□□ -1.12
ITGA4-204ENST00000465522 KRTAP19-7Q3SYF9 63 aa8.05□□□□□ -1.12
ITGA4-204ENST00000465522 SPRR2FQ96RM1 72 aa7.96□□□□□ -1.14
ITGA4-204ENST00000465522 MT1EP04732 61 aa7.92□□□□□ -1.14
ITGA4-204ENST00000465522 KRTAP5-9P26371 169 aa7.92□□□□□ -1.14
ITGA4-204ENST00000465522 KRTAP6-3Q3LI67 103 aa7.89□□□□□ -1.15
ITGA4-204ENST00000465522 KRTAP15-1Q3LI76 137 aa7.86□□□□□ -1.15
ITGA4-204ENST00000465522 MUC12Q9UKN1 5478 aa7.81□□□□□ -1.16
ITGA4-204ENST00000465522 KRTAP9-7A8MTY7 169 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms