RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 CYP4F30PQ9H0H9 118 aa8.35□□□□□ -1.07
LINC00960-201ENST00000463183 TRAV7A0A075B6U4 112 aa8.34□□□□□ -1.07
LINC00960-201ENST00000463183 LCA10Q71F78 164 aa8.32□□□□□ -1.08
LINC00960-201ENST00000463183 MP68P56378 58 aa8.31□□□□□ -1.08
LINC00960-201ENST00000463183 CSAG1Q6PB30 78 aa8.31□□□□□ -1.08
LINC00960-201ENST00000463183 KRTAP9-7A8MTY7 169 aa8.3□□□□□ -1.08
LINC00960-201ENST00000463183 H3BPC8 53 aa8.3□□□□□ -1.08
LINC00960-201ENST00000463183 LINC00208Q96KT6 92 aa8.29□□□□□ -1.08
LINC00960-201ENST00000463183 KRTAP19-6Q3LI70 58 aa8.27□□□□□ -1.09
LINC00960-201ENST00000463183 SERP2Q8N6R1 65 aa8.25□□□□□ -1.09
LINC00960-201ENST00000463183 MACF1Q9UPN3 7388 aaKnown RBP8.23□□□□□ -1.09
LINC00960-201ENST00000463183 KLKP1Q107X0 134 aa8.2□□□□□ -1.1
LINC00960-201ENST00000463183 SYNE2Q8WXH0 6885 aaKnown RBP8.17□□□□□ -1.1
LINC00960-201ENST00000463183 COX7CP15954 63 aa8.13□□□□□ -1.11
LINC00960-201ENST00000463183 C20orf197Q8N268 126 aa8.11□□□□□ -1.11
LINC00960-201ENST00000463183 SNURFQ9Y675 71 aa8.09□□□□□ -1.11
LINC00960-201ENST00000463183 ANAPC13Q9BS18 74 aa8.08□□□□□ -1.12
LINC00960-201ENST00000463183 Q5VV11 94 aa8.07□□□□□ -1.12
LINC00960-201ENST00000463183 NDUFC1O43677 76 aa8.05□□□□□ -1.12
LINC00960-201ENST00000463183 SPRR2GQ9BYE4 73 aa8.04□□□□□ -1.12
LINC00960-201ENST00000463183 A8MUN3 132 aa8.03□□□□□ -1.12
LINC00960-201ENST00000463183 MT1BP07438 61 aa8.03□□□□□ -1.12
LINC00960-201ENST00000463183 A6NN06 94 aa7.99□□□□□ -1.13
LINC00960-201ENST00000463183 KRTAP19-8Q3LI54 63 aa7.99□□□□□ -1.13
LINC00960-201ENST00000463183 DMAC1Q96GE9 116 aa7.99□□□□□ -1.13
LINC00960-201ENST00000463183 SPANXA2-OT1Q8N9U9 137 aa7.96□□□□□ -1.14
LINC00960-201ENST00000463183 CYSTM1Q9H1C7 97 aa7.94□□□□□ -1.14
LINC00960-201ENST00000463183 CRIPTQ9P021 101 aa7.94□□□□□ -1.14
LINC00960-201ENST00000463183 CCDC179H3BU77 68 aa7.92□□□□□ -1.14
LINC00960-201ENST00000463183 ADM2Q7Z4H4 148 aa7.92□□□□□ -1.14
LINC00960-201ENST00000463183 H7BZZ5 65 aa7.91□□□□□ -1.14
LINC00960-201ENST00000463183 H0YAA0 97 aa7.87□□□□□ -1.15
LINC00960-201ENST00000463183 ACYP2P14621 99 aa7.87□□□□□ -1.15
LINC00960-201ENST00000463183 KRTAP10-5P60370 271 aa7.83□□□□□ -1.16
LINC00960-201ENST00000463183 KRTAP6-3Q3LI67 103 aa7.83□□□□□ -1.16
LINC00960-201ENST00000463183 LOC100996750A0A140TA64 210 aa7.78□□□□□ -1.16
LINC00960-201ENST00000463183 KRTAP4-6Q9BYQ5 205 aa7.78□□□□□ -1.16
LINC00960-201ENST00000463183 P0C880 135 aa7.73□□□□□ -1.17
LINC00960-201ENST00000463183 R4GN34 69 aa7.71□□□□□ -1.18
LINC00960-201ENST00000463183 MUC12Q9UKN1 5478 aa7.67□□□□□ -1.18
LINC00960-201ENST00000463183 CHKB-CPT1BH3BT56 60 aa7.67□□□□□ -1.18
LINC00960-201ENST00000463183 M0QZ58 72 aa7.67□□□□□ -1.18
LINC00960-201ENST00000463183 COA5Q86WW8 74 aa7.67□□□□□ -1.18
LINC00960-201ENST00000463183 ATP5EP56381 51 aaPredicted RBP7.66□□□□□ -1.18
LINC00960-201ENST00000463183 TMEM258P61165 79 aa7.65□□□□□ -1.18
LINC00960-201ENST00000463183 SPTSSBQ8NFR3 76 aa7.65□□□□□ -1.18
LINC00960-201ENST00000463183 PLAC4Q8WY50 150 aa7.65□□□□□ -1.18
LINC00960-201ENST00000463183 NEBP20929 6669 aa7.65□□□□□ -1.19
LINC00960-201ENST00000463183 PCP4P48539 62 aa7.63□□□□□ -1.19
LINC00960-201ENST00000463183 LINC01554Q52M75 96 aa7.62□□□□□ -1.19
LINC00960-201ENST00000463183 PRO2289Q9P1D8 64 aa7.57□□□□□ -1.2
LINC00960-201ENST00000463183 KMT2DO14686 5537 aa7.55□□□□□ -1.2
LINC00960-201ENST00000463183 MT1XP80297 61 aa7.54□□□□□ -1.2
LINC00960-201ENST00000463183 MDN1Q9NU22 5596 aa7.46□□□□□ -1.21
LINC00960-201ENST00000463183 KRTAP5-9P26371 169 aa7.46□□□□□ -1.22
LINC00960-201ENST00000463183 SERP1Q9Y6X1 66 aa7.42□□□□□ -1.22
LINC00960-201ENST00000463183 SPRR2FQ96RM1 72 aa7.36□□□□□ -1.23
LINC00960-201ENST00000463183 KRTAP8-1Q8IUC2 63 aa7.33□□□□□ -1.24
LINC00960-201ENST00000463183 SEC61GP60059 68 aa7.32□□□□□ -1.24
LINC00960-201ENST00000463183 SVIPQ8NHG7 77 aa7.32□□□□□ -1.24
LINC00960-201ENST00000463183 KRTAP12-2P59991 146 aa7.3□□□□□ -1.24
LINC00960-201ENST00000463183 KRTAP20-1Q3LI63 56 aa7.29□□□□□ -1.24
LINC00960-201ENST00000463183 LINC01558Q9Y6Z2 57 aa7.28□□□□□ -1.24
LINC00960-201ENST00000463183 RPS28P62857 69 aaKnown RBP7.27□□□□□ -1.25
LINC00960-201ENST00000463183 KRTAP4-8A0A0G2JLE6 195 aa7.26□□□□□ -1.25
LINC00960-201ENST00000463183 A0A1B0GU69 56 aa7.26□□□□□ -1.25
LINC00960-201ENST00000463183 KRTAP4-8Q9BYQ9 185 aa7.26□□□□□ -1.25
LINC00960-201ENST00000463183 SPRR2EP22531 72 aa7.25□□□□□ -1.25
LINC00960-201ENST00000463183 SPRR2BP35325 72 aa7.25□□□□□ -1.25
LINC00960-201ENST00000463183 SPRR2AP35326 72 aa7.25□□□□□ -1.25
LINC00960-201ENST00000463183 KRTAP10-7P60409 375 aaPredicted RBP7.24□□□□□ -1.25
LINC00960-201ENST00000463183 KRTAP13-4Q3LI77 160 aa7.23□□□□□ -1.25
LINC00960-201ENST00000463183 A0A1B0GU33 70 aa7.19□□□□□ -1.26
LINC00960-201ENST00000463183 SMIM26A0A096LP01 95 aa7.17□□□□□ -1.26
LINC00960-201ENST00000463183 PRR15LQ9BU68 103 aa7.17□□□□□ -1.26
LINC00960-201ENST00000463183 Q1T7F1 81 aa7.15□□□□□ -1.26
LINC00960-201ENST00000463183 KRTAP10-12P60413 245 aa7.14□□□□□ -1.27
LINC00960-201ENST00000463183 CAMK2N1Q7Z7J9 78 aa7.13□□□□□ -1.27
LINC00960-201ENST00000463183 V9GYY9 64 aa7.13□□□□□ -1.27
LINC00960-201ENST00000463183 LCE1AQ5T7P2 110 aa7.1□□□□□ -1.27
LINC00960-201ENST00000463183 A0A0D9SG42 100 aa7.09□□□□□ -1.27
LINC00960-201ENST00000463183 SPATA8Q6RVD6 105 aa7.08□□□□□ -1.28
LINC00960-201ENST00000463183 KRTAP2-3P0C7H8 128 aa7.07□□□□□ -1.28
LINC00960-201ENST00000463183 KRTAP2-4Q9BYR9 128 aa7.07□□□□□ -1.28
LINC00960-201ENST00000463183 SPRR2DP22532 72 aa7.01□□□□□ -1.29
LINC00960-201ENST00000463183 PSPHP1O15172 72 aa7□□□□□ -1.29
LINC00960-201ENST00000463183 H3BS24 57 aa6.99□□□□□ -1.29
LINC00960-201ENST00000463183 UQCR11O14957 56 aa6.98□□□□□ -1.29
LINC00960-201ENST00000463183 SPINT4Q6UDR6 99 aa6.98□□□□□ -1.29
LINC00960-201ENST00000463183 KRTAP4-12Q9BQ66 201 aa6.93□□□□□ -1.3
LINC00960-201ENST00000463183 A8MU10 97 aa6.92□□□□□ -1.3
LINC00960-201ENST00000463183 KRTAP12-1P59990 96 aa6.9□□□□□ -1.3
LINC00960-201ENST00000463183 LCE3BQ5TA77 95 aa6.86□□□□□ -1.31
LINC00960-201ENST00000463183 KRTAP2-2Q9BYT5 123 aa6.86□□□□□ -1.31
LINC00960-201ENST00000463183 KRTAP2-1Q9BYU5 128 aa6.86□□□□□ -1.31
LINC00960-201ENST00000463183 MIR22HGQ0VDD5 57 aa6.85□□□□□ -1.31
LINC00960-201ENST00000463183 A6NED7 52 aa6.76□□□□□ -1.33
LINC00960-201ENST00000463183 KRTAP19-7Q3SYF9 63 aa6.73□□□□□ -1.33
LINC00960-201ENST00000463183 MT1EP04732 61 aa6.7□□□□□ -1.34
LINC00960-201ENST00000463183 KRTAP9-9Q9BYP9 154 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms