RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 DMAC1Q96GE9 116 aa7.06□□□□□ -1.28
COL6A1-202ENST00000463060 ACYP2P14621 99 aa6.96□□□□□ -1.3
COL6A1-202ENST00000463060 KRTAP3-3Q9BYR6 98 aa6.96□□□□□ -1.3
COL6A1-202ENST00000463060 LCA10Q71F78 164 aa6.95□□□□□ -1.3
COL6A1-202ENST00000463060 S4R3F8 94 aa6.95□□□□□ -1.3
COL6A1-202ENST00000463060 TMEM258P61165 79 aa6.89□□□□□ -1.31
COL6A1-202ENST00000463060 M0R2T5 61 aa6.88□□□□□ -1.31
COL6A1-202ENST00000463060 ATP5EP56381 51 aaPredicted RBP6.86□□□□□ -1.31
COL6A1-202ENST00000463060 FSIP2Q5CZC0 6907 aa6.86□□□□□ -1.31
COL6A1-202ENST00000463060 LORP23490 312 aaPredicted RBP6.85□□□□□ -1.31
COL6A1-202ENST00000463060 KRTAP10-6P60371 365 aaPredicted RBP6.85□□□□□ -1.31
COL6A1-202ENST00000463060 CSAG1Q6PB30 78 aa6.85□□□□□ -1.31
COL6A1-202ENST00000463060 LCE2DQ5TA82 110 aaPredicted RBP6.84□□□□□ -1.31
COL6A1-202ENST00000463060 COA5Q86WW8 74 aa6.83□□□□□ -1.32
COL6A1-202ENST00000463060 KRTAP9-8Q9BYQ0 159 aa6.81□□□□□ -1.32
COL6A1-202ENST00000463060 CRCT1Q9UGL9 99 aa6.8□□□□□ -1.32
COL6A1-202ENST00000463060 CHKB-CPT1BH3BT56 60 aa6.77□□□□□ -1.33
COL6A1-202ENST00000463060 MT2AP02795 61 aa6.73□□□□□ -1.33
COL6A1-202ENST00000463060 SPTSSBQ8NFR3 76 aa6.73□□□□□ -1.33
COL6A1-202ENST00000463060 H0YAA0 97 aa6.71□□□□□ -1.34
COL6A1-202ENST00000463060 SERP1Q9Y6X1 66 aa6.69□□□□□ -1.34
COL6A1-202ENST00000463060 MT1FP04733 61 aa6.68□□□□□ -1.34
COL6A1-202ENST00000463060 KRTAP3-2Q9BYR7 98 aa6.65□□□□□ -1.34
COL6A1-202ENST00000463060 KRTAP10-10P60014 251 aa6.61□□□□□ -1.35
COL6A1-202ENST00000463060 SEC61GP60059 68 aa6.61□□□□□ -1.35
COL6A1-202ENST00000463060 ADM2Q7Z4H4 148 aa6.61□□□□□ -1.35
COL6A1-202ENST00000463060 RPS28P62857 69 aaKnown RBP6.59□□□□□ -1.35
COL6A1-202ENST00000463060 P0C880 135 aa6.58□□□□□ -1.36
COL6A1-202ENST00000463060 KRTAP9-3Q9BYQ3 159 aa6.58□□□□□ -1.36
COL6A1-202ENST00000463060 LINC01558Q9Y6Z2 57 aa6.51□□□□□ -1.37
COL6A1-202ENST00000463060 KRTAP19-1Q8IUB9 90 aa6.5□□□□□ -1.37
COL6A1-202ENST00000463060 CRIPTQ9P021 101 aa6.5□□□□□ -1.37
COL6A1-202ENST00000463060 SMIM26A0A096LP01 95 aa6.47□□□□□ -1.37
COL6A1-202ENST00000463060 SPRR2GQ9BYE4 73 aa6.47□□□□□ -1.37
COL6A1-202ENST00000463060 V9GYY9 64 aa6.45□□□□□ -1.38
COL6A1-202ENST00000463060 A0A1B0GU69 56 aa6.44□□□□□ -1.38
COL6A1-202ENST00000463060 Q1T7F1 81 aa6.44□□□□□ -1.38
COL6A1-202ENST00000463060 LCE2BO14633 110 aa6.43□□□□□ -1.38
COL6A1-202ENST00000463060 R4GN34 69 aa6.38□□□□□ -1.39
COL6A1-202ENST00000463060 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.37□□□□□ -1.39
COL6A1-202ENST00000463060 M0QZ58 72 aa6.37□□□□□ -1.39
COL6A1-202ENST00000463060 USH2AO75445 5202 aa6.36□□□□□ -1.39
COL6A1-202ENST00000463060 KRTAP9-7A8MTY7 169 aa6.36□□□□□ -1.39
COL6A1-202ENST00000463060 KRTAP19-8Q3LI54 63 aa6.36□□□□□ -1.39
COL6A1-202ENST00000463060 KRTAP13-4Q3LI77 160 aa6.36□□□□□ -1.39
COL6A1-202ENST00000463060 PRR15LQ9BU68 103 aa6.36□□□□□ -1.39
COL6A1-202ENST00000463060 PRO0628Q9UI54 55 aa6.36□□□□□ -1.39
COL6A1-202ENST00000463060 A0A1B0GU33 70 aa6.35□□□□□ -1.39
COL6A1-202ENST00000463060 SSPOA2VEC9 5147 aa6.32□□□□□ -1.4
COL6A1-202ENST00000463060 Q5VV11 94 aa6.3□□□□□ -1.4
COL6A1-202ENST00000463060 MT1BP07438 61 aa6.29□□□□□ -1.4
COL6A1-202ENST00000463060 PSPHP1O15172 72 aa6.28□□□□□ -1.4
COL6A1-202ENST00000463060 SPATA8Q6RVD6 105 aa6.27□□□□□ -1.41
COL6A1-202ENST00000463060 FCGBPQ9Y6R7 5405 aaPredicted RBP6.21□□□□□ -1.41
COL6A1-202ENST00000463060 UQCR11O14957 56 aa6.21□□□□□ -1.42
COL6A1-202ENST00000463060 LINC01554Q52M75 96 aa6.21□□□□□ -1.42
COL6A1-202ENST00000463060 A6NN06 94 aa6.2□□□□□ -1.42
COL6A1-202ENST00000463060 A0A0D9SG42 100 aa6.14□□□□□ -1.43
COL6A1-202ENST00000463060 A8MU10 97 aa6.14□□□□□ -1.43
COL6A1-202ENST00000463060 MIR22HGQ0VDD5 57 aa6.11□□□□□ -1.43
COL6A1-202ENST00000463060 PLAC4Q8WY50 150 aa6.11□□□□□ -1.43
COL6A1-202ENST00000463060 KRTAP12-1P59990 96 aa6.1□□□□□ -1.43
COL6A1-202ENST00000463060 KRTAP19-6Q3LI70 58 aa6.1□□□□□ -1.43
COL6A1-202ENST00000463060 MACF1Q9UPN3 7388 aaKnown RBP6.08□□□□□ -1.44
COL6A1-202ENST00000463060 SYNE2Q8WXH0 6885 aaKnown RBP6.07□□□□□ -1.44
COL6A1-202ENST00000463060 A6NED7 52 aa6.07□□□□□ -1.44
COL6A1-202ENST00000463060 KRTAP12-2P59991 146 aa6.05□□□□□ -1.44
COL6A1-202ENST00000463060 PMAIP1Q13794 54 aa6.04□□□□□ -1.44
COL6A1-202ENST00000463060 KRTAP10-5P60370 271 aa6.02□□□□□ -1.45
COL6A1-202ENST00000463060 MT1XP80297 61 aa6.01□□□□□ -1.45
COL6A1-202ENST00000463060 SPINT4Q6UDR6 99 aa6.01□□□□□ -1.45
COL6A1-202ENST00000463060 CDC42SE1Q9NRR8 79 aa5.97□□□□□ -1.45
COL6A1-202ENST00000463060 H3BS24 57 aa5.92□□□□□ -1.46
COL6A1-202ENST00000463060 CAMK2N1Q7Z7J9 78 aa5.91□□□□□ -1.46
COL6A1-202ENST00000463060 PRO2289Q9P1D8 64 aa5.91□□□□□ -1.46
COL6A1-202ENST00000463060 BRK1Q8WUW1 75 aa5.84□□□□□ -1.47
COL6A1-202ENST00000463060 K7ERS5 55 aa5.83□□□□□ -1.48
COL6A1-202ENST00000463060 KRTAP6-3Q3LI67 103 aa5.81□□□□□ -1.48
COL6A1-202ENST00000463060 C10orf95Q9H7T3 257 aa5.8□□□□□ -1.48
COL6A1-202ENST00000463060 NEBP20929 6669 aa5.75□□□□□ -1.49
COL6A1-202ENST00000463060 KTN1-AS1Q86SY8 53 aa5.75□□□□□ -1.49
COL6A1-202ENST00000463060 KRTAP10-7P60409 375 aaPredicted RBP5.74□□□□□ -1.49
COL6A1-202ENST00000463060 KRTAP10-12P60413 245 aa5.71□□□□□ -1.5
COL6A1-202ENST00000463060 MUC12Q9UKN1 5478 aa5.68□□□□□ -1.5
COL6A1-202ENST00000463060 TNP1P09430 55 aa5.61□□□□□ -1.51
COL6A1-202ENST00000463060 A0A0A0MQY5 61 aa5.6□□□□□ -1.51
COL6A1-202ENST00000463060 ROMO1P60602 79 aa5.6□□□□□ -1.51
COL6A1-202ENST00000463060 KMT2DO14686 5537 aa5.59□□□□□ -1.51
COL6A1-202ENST00000463060 KRTAP4-8A0A0G2JLE6 195 aa5.59□□□□□ -1.51
COL6A1-202ENST00000463060 KRTAP4-8Q9BYQ9 185 aa5.59□□□□□ -1.51
COL6A1-202ENST00000463060 KRTAP25-1Q3LHN0 102 aa5.57□□□□□ -1.52
COL6A1-202ENST00000463060 KRTAP20-1Q3LI63 56 aa5.54□□□□□ -1.52
COL6A1-202ENST00000463060 MDN1Q9NU22 5596 aa5.48□□□□□ -1.53
COL6A1-202ENST00000463060 KRTAP8-1Q8IUC2 63 aa5.47□□□□□ -1.53
COL6A1-202ENST00000463060 LCE3AQ5TA76 89 aa5.46□□□□□ -1.54
COL6A1-202ENST00000463060 KRTAP5-9P26371 169 aa5.44□□□□□ -1.54
COL6A1-202ENST00000463060 KRTAP23-1A1A580 65 aa5.43□□□□□ -1.54
COL6A1-202ENST00000463060 KRTAP19-7Q3SYF9 63 aa5.38□□□□□ -1.55
COL6A1-202ENST00000463060 KRTAP19-5Q3LI72 72 aa5.34□□□□□ -1.55
COL6A1-202ENST00000463060 SPRR2FQ96RM1 72 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms