RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 A8MUN3 132 aa9.55□□□□□ -0.88
NUP43-205ENST00000463048 KRTAP3-3Q9BYR6 98 aa9.55□□□□□ -0.88
NUP43-205ENST00000463048 C20orf197Q8N268 126 aa9.54□□□□□ -0.88
NUP43-205ENST00000463048 NDUFC1O43677 76 aa9.47□□□□□ -0.89
NUP43-205ENST00000463048 DMAC1Q96GE9 116 aa9.47□□□□□ -0.89
NUP43-205ENST00000463048 KRTAP9-3Q9BYQ3 159 aa9.44□□□□□ -0.9
NUP43-205ENST00000463048 COX7CP15954 63 aa9.41□□□□□ -0.9
NUP43-205ENST00000463048 ANAPC13Q9BS18 74 aa9.35□□□□□ -0.91
NUP43-205ENST00000463048 FSIP2Q5CZC0 6907 aa9.34□□□□□ -0.91
NUP43-205ENST00000463048 LCE2BO14633 110 aa9.34□□□□□ -0.91
NUP43-205ENST00000463048 ACYP2P14621 99 aa9.34□□□□□ -0.91
NUP43-205ENST00000463048 CRCT1Q9UGL9 99 aa9.29□□□□□ -0.92
NUP43-205ENST00000463048 SPANXA2-OT1Q8N9U9 137 aa9.27□□□□□ -0.93
NUP43-205ENST00000463048 CYSTM1Q9H1C7 97 aa9.26□□□□□ -0.93
NUP43-205ENST00000463048 USH2AO75445 5202 aa9.24□□□□□ -0.93
NUP43-205ENST00000463048 CHKB-CPT1BH3BT56 60 aa9.23□□□□□ -0.93
NUP43-205ENST00000463048 ADM2Q7Z4H4 148 aa9.23□□□□□ -0.93
NUP43-205ENST00000463048 H0YAA0 97 aa9.18□□□□□ -0.94
NUP43-205ENST00000463048 CCDC179H3BU77 68 aa9.17□□□□□ -0.94
NUP43-205ENST00000463048 H7BZZ5 65 aa9.17□□□□□ -0.94
NUP43-205ENST00000463048 KRTAP19-1Q8IUB9 90 aa9.16□□□□□ -0.94
NUP43-205ENST00000463048 SPTSSBQ8NFR3 76 aa9.13□□□□□ -0.95
NUP43-205ENST00000463048 COA5Q86WW8 74 aa9.08□□□□□ -0.96
NUP43-205ENST00000463048 P0C880 135 aa9.07□□□□□ -0.96
NUP43-205ENST00000463048 SPRR2GQ9BYE4 73 aa9.07□□□□□ -0.96
NUP43-205ENST00000463048 CRIPTQ9P021 101 aa9.06□□□□□ -0.96
NUP43-205ENST00000463048 SSPOA2VEC9 5147 aa9.05□□□□□ -0.96
NUP43-205ENST00000463048 KRTAP3-2Q9BYR7 98 aa9.02□□□□□ -0.97
NUP43-205ENST00000463048 Q5VV11 94 aa8.97□□□□□ -0.97
NUP43-205ENST00000463048 KRTAP19-8Q3LI54 63 aa8.95□□□□□ -0.98
NUP43-205ENST00000463048 MT1BP07438 61 aa8.94□□□□□ -0.98
NUP43-205ENST00000463048 R4GN34 69 aa8.93□□□□□ -0.98
NUP43-205ENST00000463048 M0QZ58 72 aa8.92□□□□□ -0.98
NUP43-205ENST00000463048 KRTAP19-6Q3LI70 58 aa8.89□□□□□ -0.99
NUP43-205ENST00000463048 LINC01554Q52M75 96 aa8.82□□□□□ -1
NUP43-205ENST00000463048 ATP5EP56381 51 aaPredicted RBP8.81□□□□□ -1
NUP43-205ENST00000463048 FCGBPQ9Y6R7 5405 aaPredicted RBP8.79□□□□□ -1
NUP43-205ENST00000463048 TMEM258P61165 79 aa8.76□□□□□ -1.01
NUP43-205ENST00000463048 SEC61GP60059 68 aa8.74□□□□□ -1.01
NUP43-205ENST00000463048 SERP1Q9Y6X1 66 aa8.72□□□□□ -1.01
NUP43-205ENST00000463048 A6NN06 94 aa8.7□□□□□ -1.02
NUP43-205ENST00000463048 PLAC4Q8WY50 150 aa8.69□□□□□ -1.02
NUP43-205ENST00000463048 KRTAP13-4Q3LI77 160 aa8.65□□□□□ -1.02
NUP43-205ENST00000463048 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.63□□□□□ -1.03
NUP43-205ENST00000463048 KRTAP10-5P60370 271 aa8.63□□□□□ -1.03
NUP43-205ENST00000463048 KRTAP9-7A8MTY7 169 aa8.62□□□□□ -1.03
NUP43-205ENST00000463048 A0A1B0GU69 56 aa8.6□□□□□ -1.03
NUP43-205ENST00000463048 A0A1B0GU33 70 aa8.56□□□□□ -1.04
NUP43-205ENST00000463048 SPATA8Q6RVD6 105 aa8.54□□□□□ -1.04
NUP43-205ENST00000463048 PCP4P48539 62 aa8.53□□□□□ -1.04
NUP43-205ENST00000463048 A0A0D9SG42 100 aa8.5□□□□□ -1.05
NUP43-205ENST00000463048 MT1XP80297 61 aa8.49□□□□□ -1.05
NUP43-205ENST00000463048 PRO2289Q9P1D8 64 aa8.46□□□□□ -1.06
NUP43-205ENST00000463048 MACF1Q9UPN3 7388 aaKnown RBP8.45□□□□□ -1.06
NUP43-205ENST00000463048 PRR15LQ9BU68 103 aa8.44□□□□□ -1.06
NUP43-205ENST00000463048 LINC01558Q9Y6Z2 57 aa8.44□□□□□ -1.06
NUP43-205ENST00000463048 SPINT4Q6UDR6 99 aa8.33□□□□□ -1.08
NUP43-205ENST00000463048 SYNE2Q8WXH0 6885 aaKnown RBP8.32□□□□□ -1.08
NUP43-205ENST00000463048 A8MU10 97 aa8.31□□□□□ -1.08
NUP43-205ENST00000463048 CAMK2N1Q7Z7J9 78 aa8.31□□□□□ -1.08
NUP43-205ENST00000463048 SMIM26A0A096LP01 95 aa8.29□□□□□ -1.08
NUP43-205ENST00000463048 KRTAP12-1P59990 96 aa8.25□□□□□ -1.09
NUP43-205ENST00000463048 KRTAP12-2P59991 146 aa8.22□□□□□ -1.09
NUP43-205ENST00000463048 PSPHP1O15172 72 aa8.2□□□□□ -1.1
NUP43-205ENST00000463048 V9GYY9 64 aa8.18□□□□□ -1.1
NUP43-205ENST00000463048 KRTAP6-3Q3LI67 103 aa8.17□□□□□ -1.1
NUP43-205ENST00000463048 UQCR11O14957 56 aa8.16□□□□□ -1.1
NUP43-205ENST00000463048 Q1T7F1 81 aa8.16□□□□□ -1.1
NUP43-205ENST00000463048 KRTAP10-7P60409 375 aaPredicted RBP8.15□□□□□ -1.1
NUP43-205ENST00000463048 RPS28P62857 69 aaKnown RBP8.08□□□□□ -1.12
NUP43-205ENST00000463048 KMT2DO14686 5537 aa8.05□□□□□ -1.12
NUP43-205ENST00000463048 MIR22HGQ0VDD5 57 aa8.05□□□□□ -1.12
NUP43-205ENST00000463048 KRTAP4-8A0A0G2JLE6 195 aa8.04□□□□□ -1.12
NUP43-205ENST00000463048 KRTAP4-8Q9BYQ9 185 aa8.04□□□□□ -1.12
NUP43-205ENST00000463048 KRTAP10-12P60413 245 aa8.03□□□□□ -1.12
NUP43-205ENST00000463048 KRTAP8-1Q8IUC2 63 aa8.01□□□□□ -1.13
NUP43-205ENST00000463048 KRTAP5-9P26371 169 aa7.94□□□□□ -1.14
NUP43-205ENST00000463048 A6NED7 52 aa7.92□□□□□ -1.14
NUP43-205ENST00000463048 SPRR2FQ96RM1 72 aa7.92□□□□□ -1.14
NUP43-205ENST00000463048 C10orf95Q9H7T3 257 aa7.86□□□□□ -1.15
NUP43-205ENST00000463048 K7ERS5 55 aa7.8□□□□□ -1.16
NUP43-205ENST00000463048 MUC12Q9UKN1 5478 aa7.8□□□□□ -1.16
NUP43-205ENST00000463048 NEBP20929 6669 aa7.74□□□□□ -1.17
NUP43-205ENST00000463048 TNP1P09430 55 aa7.73□□□□□ -1.17
NUP43-205ENST00000463048 SPRR2EP22531 72 aa7.7□□□□□ -1.18
NUP43-205ENST00000463048 SPRR2BP35325 72 aa7.7□□□□□ -1.18
NUP43-205ENST00000463048 SPRR2AP35326 72 aa7.7□□□□□ -1.18
NUP43-205ENST00000463048 MDN1Q9NU22 5596 aa7.66□□□□□ -1.18
NUP43-205ENST00000463048 LCE1AQ5T7P2 110 aa7.6□□□□□ -1.19
NUP43-205ENST00000463048 LCE3AQ5TA76 89 aa7.59□□□□□ -1.19
NUP43-205ENST00000463048 CDC42SE1Q9NRR8 79 aa7.59□□□□□ -1.19
NUP43-205ENST00000463048 KRTAP19-7Q3SYF9 63 aa7.57□□□□□ -1.2
NUP43-205ENST00000463048 KRTAP19-5Q3LI72 72 aa7.55□□□□□ -1.2
NUP43-205ENST00000463048 KRTAP20-1Q3LI63 56 aa7.53□□□□□ -1.2
NUP43-205ENST00000463048 MT1EP04732 61 aa7.49□□□□□ -1.21
NUP43-205ENST00000463048 KRTAP25-1Q3LHN0 102 aa7.47□□□□□ -1.21
NUP43-205ENST00000463048 SPRR2DP22532 72 aa7.44□□□□□ -1.22
NUP43-205ENST00000463048 ROMO1P60602 79 aa7.36□□□□□ -1.23
NUP43-205ENST00000463048 KRTAP19-3Q7Z4W3 81 aa7.33□□□□□ -1.24
NUP43-205ENST00000463048 KRTAP2-3P0C7H8 128 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms