RNA–Protein interactions for RNA: ENST00000462777.1

HLA-F-222, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 779 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-222ENST00000462777 LOC101927531A0A1B0GV80 90 aa9.7□□□□□ -0.86
HLA-F-222ENST00000462777 SPINK7P58062 85 aa9.7□□□□□ -0.86
HLA-F-222ENST00000462777 LINC00208Q96KT6 92 aa9.7□□□□□ -0.86
HLA-F-222ENST00000462777 C1orf64Q8NEQ6 169 aa9.68□□□□□ -0.86
HLA-F-222ENST00000462777 Q5W150 140 aa9.67□□□□□ -0.86
HLA-F-222ENST00000462777 SNURFQ9Y675 71 aa9.67□□□□□ -0.86
HLA-F-222ENST00000462777 MACF1Q9UPN3 7388 aaKnown RBP9.64□□□□□ -0.87
HLA-F-222ENST00000462777 KRTAP19-6Q3LI70 58 aa9.64□□□□□ -0.87
HLA-F-222ENST00000462777 H7BZZ5 65 aa9.61□□□□□ -0.87
HLA-F-222ENST00000462777 TMEM258P61165 79 aa9.6□□□□□ -0.87
HLA-F-222ENST00000462777 IGKV2-30P06310 120 aa9.58□□□□□ -0.88
HLA-F-222ENST00000462777 CYSTM1Q9H1C7 97 aa9.58□□□□□ -0.88
HLA-F-222ENST00000462777 SYNE2Q8WXH0 6885 aaKnown RBP9.57□□□□□ -0.88
HLA-F-222ENST00000462777 ATP5EP56381 51 aaPredicted RBP9.56□□□□□ -0.88
HLA-F-222ENST00000462777 CYP4F30PQ9H0H9 118 aa9.55□□□□□ -0.88
HLA-F-222ENST00000462777 C7orf65Q6ZTY9 151 aa9.54□□□□□ -0.88
HLA-F-222ENST00000462777 SPANXA2-OT1Q8N9U9 137 aa9.52□□□□□ -0.89
HLA-F-222ENST00000462777 IGKV2D-30A0A075B6S6 120 aa9.48□□□□□ -0.89
HLA-F-222ENST00000462777 KRTAP6-3Q3LI67 103 aa9.42□□□□□ -0.9
HLA-F-222ENST00000462777 H1FX-AS1Q4G0G2 97 aa9.41□□□□□ -0.9
HLA-F-222ENST00000462777 A8MUN3 132 aa9.3□□□□□ -0.92
HLA-F-222ENST00000462777 DMAC1Q96GE9 116 aa9.29□□□□□ -0.92
HLA-F-222ENST00000462777 SERP1Q9Y6X1 66 aa9.28□□□□□ -0.92
HLA-F-222ENST00000462777 RPS28P62857 69 aaKnown RBP9.26□□□□□ -0.93
HLA-F-222ENST00000462777 ACYP2P14621 99 aa9.23□□□□□ -0.93
HLA-F-222ENST00000462777 C4orf26Q17RF5 130 aa9.21□□□□□ -0.94
HLA-F-222ENST00000462777 COA5Q86WW8 74 aa9.15□□□□□ -0.94
HLA-F-222ENST00000462777 A6NN06 94 aa9.13□□□□□ -0.95
HLA-F-222ENST00000462777 KRTAP3-1Q9BYR8 98 aa9.08□□□□□ -0.96
HLA-F-222ENST00000462777 CHKB-CPT1BH3BT56 60 aa9.06□□□□□ -0.96
HLA-F-222ENST00000462777 Q5VV11 94 aa9.05□□□□□ -0.96
HLA-F-222ENST00000462777 NEBP20929 6669 aa9.05□□□□□ -0.96
HLA-F-222ENST00000462777 SMIM26A0A096LP01 95 aa9.03□□□□□ -0.96
HLA-F-222ENST00000462777 CSAG1Q6PB30 78 aa9□□□□□ -0.97
HLA-F-222ENST00000462777 SPTSSBQ8NFR3 76 aa9□□□□□ -0.97
HLA-F-222ENST00000462777 MT1BP07438 61 aa8.99□□□□□ -0.97
HLA-F-222ENST00000462777 S4R3F8 94 aa8.99□□□□□ -0.97
HLA-F-222ENST00000462777 SPRR2GQ9BYE4 73 aa8.95□□□□□ -0.98
HLA-F-222ENST00000462777 KRTAP19-8Q3LI54 63 aa8.94□□□□□ -0.98
HLA-F-222ENST00000462777 V9GYY9 64 aa8.93□□□□□ -0.98
HLA-F-222ENST00000462777 MUC12Q9UKN1 5478 aa8.93□□□□□ -0.98
HLA-F-222ENST00000462777 KRTAP20-1Q3LI63 56 aa8.92□□□□□ -0.98
HLA-F-222ENST00000462777 KRTAP10-5P60370 271 aa8.9□□□□□ -0.98
HLA-F-222ENST00000462777 LCA10Q71F78 164 aa8.88□□□□□ -0.99
HLA-F-222ENST00000462777 Q1T7F1 81 aa8.86□□□□□ -0.99
HLA-F-222ENST00000462777 KRTAP5-9P26371 169 aa8.81□□□□□ -1
HLA-F-222ENST00000462777 LINC01558Q9Y6Z2 57 aa8.81□□□□□ -1
HLA-F-222ENST00000462777 KRTAP3-3Q9BYR6 98 aa8.78□□□□□ -1
HLA-F-222ENST00000462777 CRIPTQ9P021 101 aa8.75□□□□□ -1.01
HLA-F-222ENST00000462777 PRR15LQ9BU68 103 aa8.73□□□□□ -1.01
HLA-F-222ENST00000462777 SEC61GP60059 68 aa8.69□□□□□ -1.02
HLA-F-222ENST00000462777 KMT2DO14686 5537 aa8.67□□□□□ -1.02
HLA-F-222ENST00000462777 A0A1B0GU69 56 aa8.67□□□□□ -1.02
HLA-F-222ENST00000462777 H0YAA0 97 aa8.63□□□□□ -1.03
HLA-F-222ENST00000462777 MDN1Q9NU22 5596 aa8.62□□□□□ -1.03
HLA-F-222ENST00000462777 KRTAP2-3P0C7H8 128 aa8.6□□□□□ -1.03
HLA-F-222ENST00000462777 KRTAP2-4Q9BYR9 128 aa8.6□□□□□ -1.03
HLA-F-222ENST00000462777 PSPHP1O15172 72 aa8.59□□□□□ -1.03
HLA-F-222ENST00000462777 SPRR2FQ96RM1 72 aa8.51□□□□□ -1.05
HLA-F-222ENST00000462777 PRO2289Q9P1D8 64 aa8.51□□□□□ -1.05
HLA-F-222ENST00000462777 SPRR2EP22531 72 aa8.47□□□□□ -1.05
HLA-F-222ENST00000462777 SPRR2BP35325 72 aa8.47□□□□□ -1.05
HLA-F-222ENST00000462777 SPRR2AP35326 72 aa8.47□□□□□ -1.05
HLA-F-222ENST00000462777 ADM2Q7Z4H4 148 aa8.46□□□□□ -1.06
HLA-F-222ENST00000462777 KRTAP3-2Q9BYR7 98 aa8.46□□□□□ -1.06
HLA-F-222ENST00000462777 UQCR11O14957 56 aa8.43□□□□□ -1.06
HLA-F-222ENST00000462777 A0A1B0GU33 70 aa8.42□□□□□ -1.06
HLA-F-222ENST00000462777 A6NED7 52 aa8.4□□□□□ -1.06
HLA-F-222ENST00000462777 PLAC4Q8WY50 150 aa8.4□□□□□ -1.06
HLA-F-222ENST00000462777 KRTAP8-1Q8IUC2 63 aa8.37□□□□□ -1.07
HLA-F-222ENST00000462777 P0C880 135 aa8.36□□□□□ -1.07
HLA-F-222ENST00000462777 MT1XP80297 61 aa8.34□□□□□ -1.07
HLA-F-222ENST00000462777 M0QZ58 72 aa8.31□□□□□ -1.08
HLA-F-222ENST00000462777 KRTAP2-2Q9BYT5 123 aa8.3□□□□□ -1.08
HLA-F-222ENST00000462777 KRTAP2-1Q9BYU5 128 aa8.3□□□□□ -1.08
HLA-F-222ENST00000462777 CDC42SE1Q9NRR8 79 aa8.3□□□□□ -1.08
HLA-F-222ENST00000462777 MIR22HGQ0VDD5 57 aa8.29□□□□□ -1.08
HLA-F-222ENST00000462777 SPATA8Q6RVD6 105 aa8.29□□□□□ -1.08
HLA-F-222ENST00000462777 LCE1AQ5T7P2 110 aa8.27□□□□□ -1.09
HLA-F-222ENST00000462777 KRTAP12-2P59991 146 aa8.25□□□□□ -1.09
HLA-F-222ENST00000462777 R4GN34 69 aa8.25□□□□□ -1.09
HLA-F-222ENST00000462777 BRK1Q8WUW1 75 aa8.24□□□□□ -1.09
HLA-F-222ENST00000462777 SPRR2DP22532 72 aa8.2□□□□□ -1.1
HLA-F-222ENST00000462777 KRTAP13-4Q3LI77 160 aa8.16□□□□□ -1.1
HLA-F-222ENST00000462777 KRTAP4-8A0A0G2JLE6 195 aa8.1□□□□□ -1.11
HLA-F-222ENST00000462777 KRTAP4-8Q9BYQ9 185 aa8.1□□□□□ -1.11
HLA-F-222ENST00000462777 PRO0628Q9UI54 55 aa8.1□□□□□ -1.11
HLA-F-222ENST00000462777 LINC01554Q52M75 96 aa8.06□□□□□ -1.12
HLA-F-222ENST00000462777 A8MU10 97 aa8.04□□□□□ -1.12
HLA-F-222ENST00000462777 K7ERS5 55 aa8.03□□□□□ -1.12
HLA-F-222ENST00000462777 A0A0D9SG42 100 aa8□□□□□ -1.13
HLA-F-222ENST00000462777 LCE3BQ5TA77 95 aa7.99□□□□□ -1.13
HLA-F-222ENST00000462777 KRTAP10-7P60409 375 aaPredicted RBP7.96□□□□□ -1.14
HLA-F-222ENST00000462777 KRTAP10-12P60413 245 aa7.94□□□□□ -1.14
HLA-F-222ENST00000462777 KRTAP12-1P59990 96 aa7.91□□□□□ -1.14
HLA-F-222ENST00000462777 SPINT4Q6UDR6 99 aa7.85□□□□□ -1.15
HLA-F-222ENST00000462777 PMAIP1Q13794 54 aa7.8□□□□□ -1.16
HLA-F-222ENST00000462777 CAMK2N1Q7Z7J9 78 aa7.68□□□□□ -1.18
HLA-F-222ENST00000462777 ROMO1P60602 79 aa7.61□□□□□ -1.19
HLA-F-222ENST00000462777 GPR98Q8WXG9 6306 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms