RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 hDV103S1A0JD37 113 aa4.04□□□□□ -1.76
UBE4B-204ENST00000462658 C8orf87E5RJ46 101 aa4.04□□□□□ -1.76
UBE4B-204ENST00000462658 LINC00313P59037 77 aa4.04□□□□□ -1.76
UBE4B-204ENST00000462658 RETNLBQ9BQ08 111 aa4.04□□□□□ -1.76
UBE4B-204ENST00000462658 MUC17Q685J3 4493 aa4.04□□□□□ -1.76
UBE4B-204ENST00000462658 SERP2Q8N6R1 65 aa4.03□□□□□ -1.76
UBE4B-204ENST00000462658 SERP1Q9Y6X1 66 aa4.02□□□□□ -1.77
UBE4B-204ENST00000462658 ATP5EP56381 51 aaPredicted RBP4.01□□□□□ -1.77
UBE4B-204ENST00000462658 TMEM254Q8TBM7 123 aa4.01□□□□□ -1.77
UBE4B-204ENST00000462658 MRPL34Q9BQ48 92 aaKnown RBP4.01□□□□□ -1.77
UBE4B-204ENST00000462658 TRAV7A0A075B6U4 112 aa4□□□□□ -1.77
UBE4B-204ENST00000462658 FP248Q71RG6 208 aaPredicted RBP4□□□□□ -1.77
UBE4B-204ENST00000462658 C4orf26Q17RF5 130 aa3.99□□□□□ -1.77
UBE4B-204ENST00000462658 SMIM26A0A096LP01 95 aa3.98□□□□□ -1.77
UBE4B-204ENST00000462658 FAM236DA0A1B0GTK5 79 aa3.98□□□□□ -1.77
UBE4B-204ENST00000462658 C9orf92A6NGG3 77 aa3.98□□□□□ -1.77
UBE4B-204ENST00000462658 NDUFS5O43920 106 aa3.98□□□□□ -1.77
UBE4B-204ENST00000462658 FAM236CP0DP71 79 aa3.98□□□□□ -1.77
UBE4B-204ENST00000462658 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
UBE4B-204ENST00000462658 TP53AIP1Q9HCN2 124 aa3.97□□□□□ -1.77
UBE4B-204ENST00000462658 NDUFC1O43677 76 aa3.94□□□□□ -1.78
UBE4B-204ENST00000462658 KRTAP13-3Q3SY46 172 aa3.93□□□□□ -1.78
UBE4B-204ENST00000462658 TRAV22A0A0B4J277 110 aa3.92□□□□□ -1.78
UBE4B-204ENST00000462658 A8MUU9 505 aa3.92□□□□□ -1.78
UBE4B-204ENST00000462658 H0Y9P7 68 aa3.92□□□□□ -1.78
UBE4B-204ENST00000462658 MP68P56378 58 aa3.92□□□□□ -1.78
UBE4B-204ENST00000462658 KLKP1Q107X0 134 aa3.92□□□□□ -1.78
UBE4B-204ENST00000462658 C20orf197Q8N268 126 aa3.92□□□□□ -1.78
UBE4B-204ENST00000462658 C20orf166-AS1Q96NR2 134 aa3.92□□□□□ -1.78
UBE4B-204ENST00000462658 CYSTM1Q9H1C7 97 aa3.92□□□□□ -1.78
UBE4B-204ENST00000462658 Q5W150 140 aa3.91□□□□□ -1.78
UBE4B-204ENST00000462658 MUC2Q02817 5179 aa3.91□□□□□ -1.78
UBE4B-204ENST00000462658 A0A0U1RQV1 116 aa3.9□□□□□ -1.79
UBE4B-204ENST00000462658 H3BPC8 53 aa3.9□□□□□ -1.79
UBE4B-204ENST00000462658 LINC00208Q96KT6 92 aa3.9□□□□□ -1.79
UBE4B-204ENST00000462658 SNURFQ9Y675 71 aa3.9□□□□□ -1.79
UBE4B-204ENST00000462658 H7BZZ5 65 aa3.89□□□□□ -1.79
UBE4B-204ENST00000462658 TPRXLQ17RH7 258 aa3.89□□□□□ -1.79
UBE4B-204ENST00000462658 C1orf64Q8NEQ6 169 aa3.88□□□□□ -1.79
UBE4B-204ENST00000462658 ZCCHC13Q8WW36 166 aaKnown RBP3.88□□□□□ -1.79
UBE4B-204ENST00000462658 PMAIP1Q13794 54 aa3.87□□□□□ -1.79
UBE4B-204ENST00000462658 RPL37P61927 97 aaKnown RBP3.86□□□□□ -1.79
UBE4B-204ENST00000462658 ATP11AUNQ6ZP68 121 aa3.86□□□□□ -1.79
UBE4B-204ENST00000462658 BRK1Q8WUW1 75 aa3.86□□□□□ -1.79
UBE4B-204ENST00000462658 LOC101927531A0A1B0GV80 90 aa3.85□□□□□ -1.79
UBE4B-204ENST00000462658 KRTAP5-9P26371 169 aa3.85□□□□□ -1.79
UBE4B-204ENST00000462658 KRTAP5-4Q6L8H1 288 aa3.83□□□□□ -1.8
UBE4B-204ENST00000462658 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
UBE4B-204ENST00000462658 CYP4F30PQ9H0H9 118 aa3.83□□□□□ -1.8
UBE4B-204ENST00000462658 FAT4Q6V0I7 4981 aa3.83□□□□□ -1.8
UBE4B-204ENST00000462658 PCOTHQ58A44 107 aa3.82□□□□□ -1.8
UBE4B-204ENST00000462658 C7orf65Q6ZTY9 151 aa3.8□□□□□ -1.8
UBE4B-204ENST00000462658 SPINK7P58062 85 aa3.79□□□□□ -1.8
UBE4B-204ENST00000462658 Q1T7F1 81 aa3.78□□□□□ -1.8
UBE4B-204ENST00000462658 HRES1P13985 223 aa3.77□□□□□ -1.81
UBE4B-204ENST00000462658 LCE3AQ5TA76 89 aa3.77□□□□□ -1.81
UBE4B-204ENST00000462658 KTN1-AS1Q86SY8 53 aa3.77□□□□□ -1.81
UBE4B-204ENST00000462658 SPANXA2-OT1Q8N9U9 137 aa3.77□□□□□ -1.81
UBE4B-204ENST00000462658 DMAC1Q96GE9 116 aa3.7□□□□□ -1.82
UBE4B-204ENST00000462658 RBM12B-AS1Q9P1G2 102 aa3.7□□□□□ -1.82
UBE4B-204ENST00000462658 ACYP2P14621 99 aa3.69□□□□□ -1.82
UBE4B-204ENST00000462658 COX6B2Q6YFQ2 88 aa3.69□□□□□ -1.82
UBE4B-204ENST00000462658 A8MUN3 132 aa3.68□□□□□ -1.82
UBE4B-204ENST00000462658 KRTAP4-1Q9BYQ7 146 aa3.68□□□□□ -1.82
UBE4B-204ENST00000462658 FLGP20930 4061 aaPredicted RBP3.68□□□□□ -1.82
UBE4B-204ENST00000462658 COA5Q86WW8 74 aa3.66□□□□□ -1.82
UBE4B-204ENST00000462658 A6NN06 94 aa3.63□□□□□ -1.83
UBE4B-204ENST00000462658 CHKB-CPT1BH3BT56 60 aa3.63□□□□□ -1.83
UBE4B-204ENST00000462658 LCA10Q71F78 164 aa3.63□□□□□ -1.83
UBE4B-204ENST00000462658 H1FX-AS1Q4G0G2 97 aa3.62□□□□□ -1.83
UBE4B-204ENST00000462658 Q5VV11 94 aa3.61□□□□□ -1.83
UBE4B-204ENST00000462658 KRTAP19-2Q3LHN2 52 aa3.59□□□□□ -1.83
UBE4B-204ENST00000462658 CDC42SE1Q9NRR8 79 aa3.59□□□□□ -1.83
UBE4B-204ENST00000462658 SPTSSBQ8NFR3 76 aa3.57□□□□□ -1.84
UBE4B-204ENST00000462658 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
UBE4B-204ENST00000462658 S4R3F8 94 aa3.57□□□□□ -1.84
UBE4B-204ENST00000462658 PSPHP1O15172 72 aa3.56□□□□□ -1.84
UBE4B-204ENST00000462658 CSAG1Q6PB30 78 aa3.51□□□□□ -1.85
UBE4B-204ENST00000462658 CAMK2N1Q7Z7J9 78 aa3.51□□□□□ -1.85
UBE4B-204ENST00000462658 PRR15LQ9BU68 103 aa3.51□□□□□ -1.85
UBE4B-204ENST00000462658 LINC01558Q9Y6Z2 57 aa3.51□□□□□ -1.85
UBE4B-204ENST00000462658 A6NED7 52 aa3.5□□□□□ -1.85
UBE4B-204ENST00000462658 LINC01554Q52M75 96 aa3.5□□□□□ -1.85
UBE4B-204ENST00000462658 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
UBE4B-204ENST00000462658 A0A1B0GU69 56 aa3.46□□□□□ -1.86
UBE4B-204ENST00000462658 KRTAP5-5Q701N2 237 aaPredicted RBP3.46□□□□□ -1.86
UBE4B-204ENST00000462658 MT1HP80294 61 aa3.45□□□□□ -1.86
UBE4B-204ENST00000462658 M0R2T5 61 aa3.43□□□□□ -1.86
UBE4B-204ENST00000462658 KRTAP4-3Q9BYR4 195 aa3.43□□□□□ -1.86
UBE4B-204ENST00000462658 USH2AO75445 5202 aa3.42□□□□□ -1.86
UBE4B-204ENST00000462658 H0YAA0 97 aa3.42□□□□□ -1.86
UBE4B-204ENST00000462658 ADM2Q7Z4H4 148 aa3.42□□□□□ -1.86
UBE4B-204ENST00000462658 FSIP2Q5CZC0 6907 aa3.4□□□□□ -1.87
UBE4B-204ENST00000462658 P0C880 135 aa3.39□□□□□ -1.87
UBE4B-204ENST00000462658 A0A1B0GU33 70 aa3.38□□□□□ -1.87
UBE4B-204ENST00000462658 SSPOA2VEC9 5147 aa3.38□□□□□ -1.87
UBE4B-204ENST00000462658 PP632Q6XCG6 107 aa3.37□□□□□ -1.87
UBE4B-204ENST00000462658 UQCR11O14957 56 aa3.36□□□□□ -1.87
UBE4B-204ENST00000462658 SPRR5A0A1B0GTR4 108 aa3.34□□□□□ -1.87
UBE4B-204ENST00000462658 MIR22HGQ0VDD5 57 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms