RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 FAM236BA0A1B0GV22 79 aa4.93□□□□□ -1.62
TRAPPC12-213ENST00000461577 KLKP1Q107X0 134 aa4.93□□□□□ -1.62
TRAPPC12-213ENST00000461577 USH2AO75445 5202 aa4.92□□□□□ -1.62
TRAPPC12-213ENST00000461577 H3BPC8 53 aa4.92□□□□□ -1.62
TRAPPC12-213ENST00000461577 MT-ATP8P03928 68 aa4.92□□□□□ -1.62
TRAPPC12-213ENST00000461577 A8MUN3 132 aa4.91□□□□□ -1.62
TRAPPC12-213ENST00000461577 KRTAP4-8Q9BYQ9 185 aa4.9□□□□□ -1.63
TRAPPC12-213ENST00000461577 NDUFC1O43677 76 aa4.87□□□□□ -1.63
TRAPPC12-213ENST00000461577 SMIM20Q8N5G0 67 aa4.86□□□□□ -1.63
TRAPPC12-213ENST00000461577 KRTAP19-1Q8IUB9 90 aa4.85□□□□□ -1.63
TRAPPC12-213ENST00000461577 TRAV7A0A075B6U4 112 aa4.84□□□□□ -1.63
TRAPPC12-213ENST00000461577 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC12-213ENST00000461577 SSPOA2VEC9 5147 aa4.84□□□□□ -1.64
TRAPPC12-213ENST00000461577 DMAC1Q96GE9 116 aa4.79□□□□□ -1.64
TRAPPC12-213ENST00000461577 KRTAP19-6Q3LI70 58 aa4.77□□□□□ -1.65
TRAPPC12-213ENST00000461577 H0YAA0 97 aa4.76□□□□□ -1.65
TRAPPC12-213ENST00000461577 SPRR2GQ9BYE4 73 aa4.76□□□□□ -1.65
TRAPPC12-213ENST00000461577 CRIPTQ9P021 101 aa4.76□□□□□ -1.65
TRAPPC12-213ENST00000461577 Q5VV11 94 aa4.75□□□□□ -1.65
TRAPPC12-213ENST00000461577 ADM2Q7Z4H4 148 aa4.75□□□□□ -1.65
TRAPPC12-213ENST00000461577 FCGBPQ9Y6R7 5405 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC12-213ENST00000461577 ACYP2P14621 99 aa4.73□□□□□ -1.65
TRAPPC12-213ENST00000461577 SNURFQ9Y675 71 aa4.73□□□□□ -1.65
TRAPPC12-213ENST00000461577 KRTAP19-8Q3LI54 63 aa4.72□□□□□ -1.65
TRAPPC12-213ENST00000461577 SERP2Q8N6R1 65 aa4.71□□□□□ -1.66
TRAPPC12-213ENST00000461577 MT1BP07438 61 aa4.69□□□□□ -1.66
TRAPPC12-213ENST00000461577 C20orf197Q8N268 126 aa4.69□□□□□ -1.66
TRAPPC12-213ENST00000461577 SPTSSBQ8NFR3 76 aa4.67□□□□□ -1.66
TRAPPC12-213ENST00000461577 CHKB-CPT1BH3BT56 60 aa4.66□□□□□ -1.66
TRAPPC12-213ENST00000461577 KRTAP4-12Q9BQ66 201 aa4.66□□□□□ -1.66
TRAPPC12-213ENST00000461577 KRTAP9-7A8MTY7 169 aa4.65□□□□□ -1.67
TRAPPC12-213ENST00000461577 LCE3BQ5TA77 95 aa4.65□□□□□ -1.67
TRAPPC12-213ENST00000461577 A6NN06 94 aa4.64□□□□□ -1.67
TRAPPC12-213ENST00000461577 SPANXA2-OT1Q8N9U9 137 aa4.64□□□□□ -1.67
TRAPPC12-213ENST00000461577 P0C880 135 aa4.63□□□□□ -1.67
TRAPPC12-213ENST00000461577 COX7CP15954 63 aa4.63□□□□□ -1.67
TRAPPC12-213ENST00000461577 ANAPC13Q9BS18 74 aa4.62□□□□□ -1.67
TRAPPC12-213ENST00000461577 R4GN34 69 aa4.62□□□□□ -1.67
TRAPPC12-213ENST00000461577 MACF1Q9UPN3 7388 aaKnown RBP4.6□□□□□ -1.67
TRAPPC12-213ENST00000461577 M0QZ58 72 aa4.59□□□□□ -1.67
TRAPPC12-213ENST00000461577 KRTAP9-9Q9BYP9 154 aa4.59□□□□□ -1.67
TRAPPC12-213ENST00000461577 KRTAP9-4Q9BYQ2 154 aa4.59□□□□□ -1.67
TRAPPC12-213ENST00000461577 KRTAP10-5P60370 271 aa4.58□□□□□ -1.68
TRAPPC12-213ENST00000461577 PLAC4Q8WY50 150 aa4.55□□□□□ -1.68
TRAPPC12-213ENST00000461577 CCDC179H3BU77 68 aa4.54□□□□□ -1.68
TRAPPC12-213ENST00000461577 LINC01554Q52M75 96 aa4.52□□□□□ -1.69
TRAPPC12-213ENST00000461577 KRTAP4-8A0A0G2JLE6 195 aa4.51□□□□□ -1.69
TRAPPC12-213ENST00000461577 COA5Q86WW8 74 aa4.51□□□□□ -1.69
TRAPPC12-213ENST00000461577 CYSTM1Q9H1C7 97 aa4.51□□□□□ -1.69
TRAPPC12-213ENST00000461577 PCP4P48539 62 aa4.5□□□□□ -1.69
TRAPPC12-213ENST00000461577 H7BZZ5 65 aa4.49□□□□□ -1.69
TRAPPC12-213ENST00000461577 PRO2289Q9P1D8 64 aa4.49□□□□□ -1.69
TRAPPC12-213ENST00000461577 SYNE2Q8WXH0 6885 aaKnown RBP4.47□□□□□ -1.69
TRAPPC12-213ENST00000461577 KRTAP6-3Q3LI67 103 aa4.47□□□□□ -1.69
TRAPPC12-213ENST00000461577 SEC61GP60059 68 aa4.43□□□□□ -1.7
TRAPPC12-213ENST00000461577 MT1XP80297 61 aa4.43□□□□□ -1.7
TRAPPC12-213ENST00000461577 SERP1Q9Y6X1 66 aa4.42□□□□□ -1.7
TRAPPC12-213ENST00000461577 TMEM258P61165 79 aa4.39□□□□□ -1.71
TRAPPC12-213ENST00000461577 ATP5EP56381 51 aaPredicted RBP4.37□□□□□ -1.71
TRAPPC12-213ENST00000461577 KRTAP13-4Q3LI77 160 aa4.36□□□□□ -1.71
TRAPPC12-213ENST00000461577 KRTAP4-7Q9BYR0 210 aa4.36□□□□□ -1.71
TRAPPC12-213ENST00000461577 LCE1DQ5T752 114 aa4.35□□□□□ -1.71
TRAPPC12-213ENST00000461577 A0A1B0GU33 70 aa4.31□□□□□ -1.72
TRAPPC12-213ENST00000461577 KRTAP12-2P59991 146 aa4.31□□□□□ -1.72
TRAPPC12-213ENST00000461577 A0A1B0GU69 56 aa4.3□□□□□ -1.72
TRAPPC12-213ENST00000461577 A0A0D9SG42 100 aa4.29□□□□□ -1.72
TRAPPC12-213ENST00000461577 KRTAP5-9P26371 169 aa4.29□□□□□ -1.72
TRAPPC12-213ENST00000461577 SPATA8Q6RVD6 105 aa4.28□□□□□ -1.72
TRAPPC12-213ENST00000461577 CAMK2N1Q7Z7J9 78 aa4.28□□□□□ -1.72
TRAPPC12-213ENST00000461577 KRTAP8-1Q8IUC2 63 aa4.26□□□□□ -1.73
TRAPPC12-213ENST00000461577 KMT2DO14686 5537 aa4.26□□□□□ -1.73
TRAPPC12-213ENST00000461577 MUC12Q9UKN1 5478 aa4.24□□□□□ -1.73
TRAPPC12-213ENST00000461577 KRTAP10-7P60409 375 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC12-213ENST00000461577 RPS28P62857 69 aaKnown RBP4.23□□□□□ -1.73
TRAPPC12-213ENST00000461577 SPINT4Q6UDR6 99 aa4.23□□□□□ -1.73
TRAPPC12-213ENST00000461577 SPRR2FQ96RM1 72 aa4.23□□□□□ -1.73
TRAPPC12-213ENST00000461577 PRR15LQ9BU68 103 aa4.23□□□□□ -1.73
TRAPPC12-213ENST00000461577 KRTAP4-9Q9BYQ8 210 aa4.23□□□□□ -1.73
TRAPPC12-213ENST00000461577 SMIM26A0A096LP01 95 aa4.21□□□□□ -1.74
TRAPPC12-213ENST00000461577 KRTAP10-12P60413 245 aa4.21□□□□□ -1.74
TRAPPC12-213ENST00000461577 NEBP20929 6669 aa4.21□□□□□ -1.74
TRAPPC12-213ENST00000461577 LCE4AQ5TA78 99 aa4.19□□□□□ -1.74
TRAPPC12-213ENST00000461577 KRTAP4-2Q9BYR5 136 aa4.19□□□□□ -1.74
TRAPPC12-213ENST00000461577 LINC01558Q9Y6Z2 57 aa4.18□□□□□ -1.74
TRAPPC12-213ENST00000461577 KRTAP12-1P59990 96 aa4.17□□□□□ -1.74
TRAPPC12-213ENST00000461577 KRTAP19-4Q3LI73 84 aa4.16□□□□□ -1.74
TRAPPC12-213ENST00000461577 SPRR2EP22531 72 aa4.15□□□□□ -1.75
TRAPPC12-213ENST00000461577 SPRR2BP35325 72 aa4.15□□□□□ -1.75
TRAPPC12-213ENST00000461577 SPRR2AP35326 72 aa4.15□□□□□ -1.75
TRAPPC12-213ENST00000461577 A8MU10 97 aa4.14□□□□□ -1.75
TRAPPC12-213ENST00000461577 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
TRAPPC12-213ENST00000461577 H3BS24 57 aa4.1□□□□□ -1.75
TRAPPC12-213ENST00000461577 Q1T7F1 81 aa4.1□□□□□ -1.75
TRAPPC12-213ENST00000461577 KRTAP20-1Q3LI63 56 aa4.1□□□□□ -1.75
TRAPPC12-213ENST00000461577 LCE1AQ5T7P2 110 aa4.07□□□□□ -1.76
TRAPPC12-213ENST00000461577 KRTAP4-11Q9BYQ6 195 aa4.07□□□□□ -1.76
TRAPPC12-213ENST00000461577 V9GYY9 64 aa4.07□□□□□ -1.76
TRAPPC12-213ENST00000461577 UQCR11O14957 56 aa4.06□□□□□ -1.76
TRAPPC12-213ENST00000461577 SVIPQ8NHG7 77 aa4.04□□□□□ -1.76
TRAPPC12-213ENST00000461577 KRTAP2-3P0C7H8 128 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 193.4 ms