RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	MT-ATP8	P03928	68 aa		6	□□□□□ -1.45
FDPS-204	ENST00000461507	FAM236A	A0A1B0GUQ0	79 aa		5.99	□□□□□ -1.45
FDPS-204	ENST00000461507	FAM236B	A0A1B0GV22	79 aa		5.99	□□□□□ -1.45
FDPS-204	ENST00000461507	LCA10	Q71F78	164 aa		5.99	□□□□□ -1.45
FDPS-204	ENST00000461507	MACF1	Q9UPN3	7388 aa	Known RBP	5.99	□□□□□ -1.45
FDPS-204	ENST00000461507	CSAG1	Q6PB30	78 aa		5.98	□□□□□ -1.45
FDPS-204	ENST00000461507	SYNE2	Q8WXH0	6885 aa	Known RBP	5.96	□□□□□ -1.46
FDPS-204	ENST00000461507	KLKP1	Q107X0	134 aa		5.95	□□□□□ -1.46
FDPS-204	ENST00000461507	IMUP	Q9GZP8	106 aa		5.95	□□□□□ -1.46
FDPS-204	ENST00000461507		H3BPC8	53 aa		5.92	□□□□□ -1.46
FDPS-204	ENST00000461507		A8MUN3	132 aa		5.89	□□□□□ -1.47
FDPS-204	ENST00000461507	NDUFC1	O43677	76 aa		5.88	□□□□□ -1.47
FDPS-204	ENST00000461507	SMIM20	Q8N5G0	67 aa		5.87	□□□□□ -1.47
FDPS-204	ENST00000461507	TRAV7	A0A075B6U4	112 aa		5.85	□□□□□ -1.47
FDPS-204	ENST00000461507	KRTAP3-3	Q9BYR6	98 aa		5.85	□□□□□ -1.47
FDPS-204	ENST00000461507	KRTAP6-3	Q3LI67	103 aa		5.8	□□□□□ -1.48
FDPS-204	ENST00000461507	SNURF	Q9Y675	71 aa		5.78	□□□□□ -1.48
FDPS-204	ENST00000461507	DMAC1	Q96GE9	116 aa		5.77	□□□□□ -1.49
FDPS-204	ENST00000461507	ADM2	Q7Z4H4	148 aa		5.73	□□□□□ -1.49
FDPS-204	ENST00000461507	C20orf197	Q8N268	126 aa		5.73	□□□□□ -1.49
FDPS-204	ENST00000461507	MT1B	P07438	61 aa		5.72	□□□□□ -1.49
FDPS-204	ENST00000461507	KRTAP19-8	Q3LI54	63 aa		5.71	□□□□□ -1.5
FDPS-204	ENST00000461507	SERP2	Q8N6R1	65 aa		5.71	□□□□□ -1.5
FDPS-204	ENST00000461507	SPRR2G	Q9BYE4	73 aa		5.71	□□□□□ -1.5
FDPS-204	ENST00000461507	ACYP2	P14621	99 aa		5.7	□□□□□ -1.5
FDPS-204	ENST00000461507	CHKB-CPT1B	H3BT56	60 aa		5.69	□□□□□ -1.5
FDPS-204	ENST00000461507		Q5VV11	94 aa		5.69	□□□□□ -1.5
FDPS-204	ENST00000461507	NEB	P20929	6669 aa		5.68	□□□□□ -1.5
FDPS-204	ENST00000461507		H0YAA0	97 aa		5.68	□□□□□ -1.5
FDPS-204	ENST00000461507	CRIPT	Q9P021	101 aa		5.67	□□□□□ -1.5
FDPS-204	ENST00000461507		A6NN06	94 aa		5.64	□□□□□ -1.51
FDPS-204	ENST00000461507	SPTSSB	Q8NFR3	76 aa		5.64	□□□□□ -1.51
FDPS-204	ENST00000461507	KRTAP10-5	P60370	271 aa		5.61	□□□□□ -1.51
FDPS-204	ENST00000461507	COX7C	P15954	63 aa		5.59	□□□□□ -1.51
FDPS-204	ENST00000461507	SPANXA2-OT1	Q8N9U9	137 aa		5.59	□□□□□ -1.51
FDPS-204	ENST00000461507		R4GN34	69 aa		5.59	□□□□□ -1.51
FDPS-204	ENST00000461507		P0C880	135 aa		5.58	□□□□□ -1.52
FDPS-204	ENST00000461507	MUC12	Q9UKN1	5478 aa		5.56	□□□□□ -1.52
FDPS-204	ENST00000461507		M0QZ58	72 aa		5.56	□□□□□ -1.52
FDPS-204	ENST00000461507	KRTAP3-2	Q9BYR7	98 aa		5.56	□□□□□ -1.52
FDPS-204	ENST00000461507	ANAPC13	Q9BS18	74 aa		5.53	□□□□□ -1.52
FDPS-204	ENST00000461507	KRTAP5-9	P26371	169 aa		5.52	□□□□□ -1.53
FDPS-204	ENST00000461507	LINC01554	Q52M75	96 aa		5.52	□□□□□ -1.53
FDPS-204	ENST00000461507	COA5	Q86WW8	74 aa		5.49	□□□□□ -1.53
FDPS-204	ENST00000461507	PLAC4	Q8WY50	150 aa		5.48	□□□□□ -1.53
FDPS-204	ENST00000461507	CYSTM1	Q9H1C7	97 aa		5.45	□□□□□ -1.54
FDPS-204	ENST00000461507		H7BZZ5	65 aa		5.44	□□□□□ -1.54
FDPS-204	ENST00000461507	KMT2D	O14686	5537 aa		5.44	□□□□□ -1.54
FDPS-204	ENST00000461507	KRTAP20-1	Q3LI63	56 aa		5.4	□□□□□ -1.54
FDPS-204	ENST00000461507	CCDC179	H3BU77	68 aa		5.39	□□□□□ -1.55
FDPS-204	ENST00000461507	SEC61G	P60059	68 aa		5.39	□□□□□ -1.55
FDPS-204	ENST00000461507	PRO2289	Q9P1D8	64 aa		5.38	□□□□□ -1.55
FDPS-204	ENST00000461507	MDN1	Q9NU22	5596 aa		5.37	□□□□□ -1.55
FDPS-204	ENST00000461507	PCP4	P48539	62 aa		5.37	□□□□□ -1.55
FDPS-204	ENST00000461507	SERP1	Q9Y6X1	66 aa		5.36	□□□□□ -1.55
FDPS-204	ENST00000461507	MT1X	P80297	61 aa		5.32	□□□□□ -1.56
FDPS-204	ENST00000461507	ATP5E	P56381	51 aa	Predicted RBP	5.27	□□□□□ -1.57
FDPS-204	ENST00000461507	KRTAP13-4	Q3LI77	160 aa		5.26	□□□□□ -1.57
FDPS-204	ENST00000461507	KRTAP12-2	P59991	146 aa		5.25	□□□□□ -1.57
FDPS-204	ENST00000461507	SPRR2F	Q96RM1	72 aa		5.25	□□□□□ -1.57
FDPS-204	ENST00000461507		A0A0D9SG42	100 aa		5.24	□□□□□ -1.57
FDPS-204	ENST00000461507		A0A1B0GU69	56 aa		5.23	□□□□□ -1.57
FDPS-204	ENST00000461507	KRTAP2-3	P0C7H8	128 aa		5.23	□□□□□ -1.57
FDPS-204	ENST00000461507	KRTAP2-4	Q9BYR9	128 aa		5.23	□□□□□ -1.57
FDPS-204	ENST00000461507		A0A1B0GU33	70 aa		5.22	□□□□□ -1.57
FDPS-204	ENST00000461507	SPRR2E	P22531	72 aa		5.2	□□□□□ -1.58
FDPS-204	ENST00000461507	SPRR2B	P35325	72 aa		5.2	□□□□□ -1.58
FDPS-204	ENST00000461507	SPRR2A	P35326	72 aa		5.2	□□□□□ -1.58
FDPS-204	ENST00000461507	SPATA8	Q6RVD6	105 aa		5.2	□□□□□ -1.58
FDPS-204	ENST00000461507	CAMK2N1	Q7Z7J9	78 aa		5.2	□□□□□ -1.58
FDPS-204	ENST00000461507	TMEM258	P61165	79 aa		5.19	□□□□□ -1.58
FDPS-204	ENST00000461507	KRTAP8-1	Q8IUC2	63 aa		5.19	□□□□□ -1.58
FDPS-204	ENST00000461507	LCE1A	Q5T7P2	110 aa		5.16	□□□□□ -1.58
FDPS-204	ENST00000461507	SPINT4	Q6UDR6	99 aa		5.15	□□□□□ -1.59
FDPS-204	ENST00000461507	PRR15L	Q9BU68	103 aa		5.14	□□□□□ -1.59
FDPS-204	ENST00000461507	SMIM26	A0A096LP01	95 aa		5.09	□□□□□ -1.59
FDPS-204	ENST00000461507	KRTAP4-8	A0A0G2JLE6	195 aa		5.09	□□□□□ -1.59
FDPS-204	ENST00000461507	KRTAP4-8	Q9BYQ9	185 aa		5.09	□□□□□ -1.59
FDPS-204	ENST00000461507	KRTAP10-7	P60409	375 aa	Predicted RBP	5.08	□□□□□ -1.6
FDPS-204	ENST00000461507	KRTAP10-12	P60413	245 aa		5.07	□□□□□ -1.6
FDPS-204	ENST00000461507	KRTAP2-2	Q9BYT5	123 aa		5.05	□□□□□ -1.6
FDPS-204	ENST00000461507	KRTAP2-1	Q9BYU5	128 aa		5.05	□□□□□ -1.6
FDPS-204	ENST00000461507		A8MU10	97 aa		5.04	□□□□□ -1.6
FDPS-204	ENST00000461507	LINC01558	Q9Y6Z2	57 aa		5.04	□□□□□ -1.6
FDPS-204	ENST00000461507	SPRR2D	P22532	72 aa		5.03	□□□□□ -1.6
FDPS-204	ENST00000461507	KRTAP12-1	P59990	96 aa		5.02	□□□□□ -1.61
FDPS-204	ENST00000461507	UQCR11	O14957	56 aa		4.93	□□□□□ -1.62
FDPS-204	ENST00000461507	LCE3B	Q5TA77	95 aa		4.91	□□□□□ -1.62
FDPS-204	ENST00000461507	PSPHP1	O15172	72 aa		4.88	□□□□□ -1.63
FDPS-204	ENST00000461507		V9GYY9	64 aa		4.88	□□□□□ -1.63
FDPS-204	ENST00000461507	MIR22HG	Q0VDD5	57 aa		4.85	□□□□□ -1.63
FDPS-204	ENST00000461507		Q1T7F1	81 aa		4.8	□□□□□ -1.64
FDPS-204	ENST00000461507	TNP1	P09430	55 aa		4.79	□□□□□ -1.64
FDPS-204	ENST00000461507		K7ERS5	55 aa		4.78	□□□□□ -1.64
FDPS-204	ENST00000461507	C10orf95	Q9H7T3	257 aa		4.78	□□□□□ -1.64
FDPS-204	ENST00000461507	KRTAP19-7	Q3SYF9	63 aa		4.77	□□□□□ -1.65
FDPS-204	ENST00000461507	LCE5A	Q5TCM9	118 aa		4.75	□□□□□ -1.65
FDPS-204	ENST00000461507		A6NED7	52 aa		4.74	□□□□□ -1.65
FDPS-204	ENST00000461507	MT1E	P04732	61 aa		4.73	□□□□□ -1.65
FDPS-204	ENST00000461507	KRTAP19-3	Q7Z4W3	81 aa		4.71	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms