RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 SPRR2DP22532 72 aa5.58□□□□□ -1.52
C9orf78-202ENST00000461349 hDV103S1A0JD37 113 aa5.57□□□□□ -1.52
C9orf78-202ENST00000461349 HCG22E2RYF7 251 aa5.57□□□□□ -1.52
C9orf78-202ENST00000461349 LCE1AQ5T7P2 110 aa5.57□□□□□ -1.52
C9orf78-202ENST00000461349 CASC2Q6XLA1 102 aa5.57□□□□□ -1.52
C9orf78-202ENST00000461349 NDUFS5O43920 106 aa5.56□□□□□ -1.52
C9orf78-202ENST00000461349 MT-ATP8P03928 68 aa5.55□□□□□ -1.52
C9orf78-202ENST00000461349 TMEM254Q8TBM7 123 aa5.55□□□□□ -1.52
C9orf78-202ENST00000461349 MMP24-AS1A0A0U1RRL7 71 aa5.54□□□□□ -1.52
C9orf78-202ENST00000461349 MRPL34Q9BQ48 92 aaKnown RBP5.54□□□□□ -1.52
C9orf78-202ENST00000461349 IGKV2D-30A0A075B6S6 120 aa5.53□□□□□ -1.52
C9orf78-202ENST00000461349 IGKV2-30P06310 120 aa5.53□□□□□ -1.52
C9orf78-202ENST00000461349 A0A087WVE0 104 aa5.52□□□□□ -1.53
C9orf78-202ENST00000461349 KRTAP8-1Q8IUC2 63 aa5.52□□□□□ -1.53
C9orf78-202ENST00000461349 SCGB1A1P11684 91 aa5.51□□□□□ -1.53
C9orf78-202ENST00000461349 KLKP1Q107X0 134 aa5.51□□□□□ -1.53
C9orf78-202ENST00000461349 C7orf65Q6ZTY9 151 aa5.51□□□□□ -1.53
C9orf78-202ENST00000461349 CSAG1Q6PB30 78 aa5.5□□□□□ -1.53
C9orf78-202ENST00000461349 C4orf26Q17RF5 130 aa5.48□□□□□ -1.53
C9orf78-202ENST00000461349 LCE3BQ5TA77 95 aa5.47□□□□□ -1.53
C9orf78-202ENST00000461349 S4R3F8 94 aa5.47□□□□□ -1.53
C9orf78-202ENST00000461349 TP53AIP1Q9HCN2 124 aa5.45□□□□□ -1.54
C9orf78-202ENST00000461349 PRO2289Q9P1D8 64 aa5.44□□□□□ -1.54
C9orf78-202ENST00000461349 CRIPTQ9P021 101 aa5.42□□□□□ -1.54
C9orf78-202ENST00000461349 UQCRQO14949 82 aa5.4□□□□□ -1.54
C9orf78-202ENST00000461349 LCA10Q71F78 164 aa5.4□□□□□ -1.54
C9orf78-202ENST00000461349 SMIM20Q8N5G0 67 aa5.4□□□□□ -1.54
C9orf78-202ENST00000461349 ATOX1O00244 68 aa5.39□□□□□ -1.55
C9orf78-202ENST00000461349 PCP4P48539 62 aa5.38□□□□□ -1.55
C9orf78-202ENST00000461349 MP68P56378 58 aa5.37□□□□□ -1.55
C9orf78-202ENST00000461349 Q5W150 140 aa5.37□□□□□ -1.55
C9orf78-202ENST00000461349 TRAV7A0A075B6U4 112 aa5.35□□□□□ -1.55
C9orf78-202ENST00000461349 TRAV22A0A0B4J277 110 aa5.35□□□□□ -1.55
C9orf78-202ENST00000461349 H0Y9P7 68 aa5.35□□□□□ -1.55
C9orf78-202ENST00000461349 KRTAP3-3Q9BYR6 98 aa5.35□□□□□ -1.55
C9orf78-202ENST00000461349 KRTAP3-2Q9BYR7 98 aa5.35□□□□□ -1.55
C9orf78-202ENST00000461349 OCR1Q9BZK8 76 aa5.35□□□□□ -1.55
C9orf78-202ENST00000461349 DSTQ03001 7570 aaKnown RBP5.34□□□□□ -1.55
C9orf78-202ENST00000461349 KRTAP3-1Q9BYR8 98 aa5.33□□□□□ -1.56
C9orf78-202ENST00000461349 KRTAP12-2P59991 146 aa5.31□□□□□ -1.56
C9orf78-202ENST00000461349 MT1XP80297 61 aa5.31□□□□□ -1.56
C9orf78-202ENST00000461349 C1orf64Q8NEQ6 169 aa5.31□□□□□ -1.56
C9orf78-202ENST00000461349 SERP2Q8N6R1 65 aa5.3□□□□□ -1.56
C9orf78-202ENST00000461349 LINC00208Q96KT6 92 aa5.3□□□□□ -1.56
C9orf78-202ENST00000461349 LOC101927531A0A1B0GV80 90 aa5.29□□□□□ -1.56
C9orf78-202ENST00000461349 ANAPC13Q9BS18 74 aa5.29□□□□□ -1.56
C9orf78-202ENST00000461349 H3BPC8 53 aa5.28□□□□□ -1.56
C9orf78-202ENST00000461349 KRTAP4-8A0A0G2JLE6 195 aa5.26□□□□□ -1.57
C9orf78-202ENST00000461349 KRTAP4-8Q9BYQ9 185 aa5.26□□□□□ -1.57
C9orf78-202ENST00000461349 CYP4F30PQ9H0H9 118 aa5.25□□□□□ -1.57
C9orf78-202ENST00000461349 COX7CP15954 63 aa5.24□□□□□ -1.57
C9orf78-202ENST00000461349 PLAC4Q8WY50 150 aa5.24□□□□□ -1.57
C9orf78-202ENST00000461349 C20orf197Q8N268 126 aa5.23□□□□□ -1.57
C9orf78-202ENST00000461349 KRTAP4-9Q9BYQ8 210 aa5.22□□□□□ -1.57
C9orf78-202ENST00000461349 SNURFQ9Y675 71 aa5.22□□□□□ -1.57
C9orf78-202ENST00000461349 A8MUN3 132 aa5.21□□□□□ -1.58
C9orf78-202ENST00000461349 NDUFC1O43677 76 aa5.14□□□□□ -1.59
C9orf78-202ENST00000461349 H0YAA0 97 aa5.12□□□□□ -1.59
C9orf78-202ENST00000461349 CCDC179H3BU77 68 aa5.12□□□□□ -1.59
C9orf78-202ENST00000461349 KRTAP10-7P60409 375 aaPredicted RBP5.06□□□□□ -1.6
C9orf78-202ENST00000461349 ADM2Q7Z4H4 148 aa5.06□□□□□ -1.6
C9orf78-202ENST00000461349 SPANXA2-OT1Q8N9U9 137 aa5.06□□□□□ -1.6
C9orf78-202ENST00000461349 KRTAP10-12P60413 245 aa5.05□□□□□ -1.6
C9orf78-202ENST00000461349 HMCN1Q96RW7 5635 aa5.04□□□□□ -1.6
C9orf78-202ENST00000461349 H7BZZ5 65 aa5.04□□□□□ -1.6
C9orf78-202ENST00000461349 ACYP2P14621 99 aa5.04□□□□□ -1.6
C9orf78-202ENST00000461349 LCE1DQ5T752 114 aa5.02□□□□□ -1.61
C9orf78-202ENST00000461349 DMAC1Q96GE9 116 aa5.02□□□□□ -1.61
C9orf78-202ENST00000461349 CYSTM1Q9H1C7 97 aa5.02□□□□□ -1.61
C9orf78-202ENST00000461349 CHKB-CPT1BH3BT56 60 aa5.01□□□□□ -1.61
C9orf78-202ENST00000461349 R4GN34 69 aa5.01□□□□□ -1.61
C9orf78-202ENST00000461349 AHNAK2Q8IVF2 5795 aa5□□□□□ -1.61
C9orf78-202ENST00000461349 ATP5EP56381 51 aaPredicted RBP4.98□□□□□ -1.61
C9orf78-202ENST00000461349 TMEM258P61165 79 aa4.97□□□□□ -1.61
C9orf78-202ENST00000461349 SPTSSBQ8NFR3 76 aa4.95□□□□□ -1.62
C9orf78-202ENST00000461349 M0QZ58 72 aa4.93□□□□□ -1.62
C9orf78-202ENST00000461349 KRTAP5-10Q6L8G5 202 aa4.93□□□□□ -1.62
C9orf78-202ENST00000461349 MT4P47944 62 aa4.92□□□□□ -1.62
C9orf78-202ENST00000461349 COA5Q86WW8 74 aa4.92□□□□□ -1.62
C9orf78-202ENST00000461349 LINC01554Q52M75 96 aa4.91□□□□□ -1.62
C9orf78-202ENST00000461349 LCE5AQ5TCM9 118 aa4.91□□□□□ -1.62
C9orf78-202ENST00000461349 LCE4AQ5TA78 99 aa4.89□□□□□ -1.63
C9orf78-202ENST00000461349 P0C880 135 aa4.83□□□□□ -1.64
C9orf78-202ENST00000461349 KRTAP19-3Q7Z4W3 81 aa4.83□□□□□ -1.64
C9orf78-202ENST00000461349 KRTAP5-7Q6L8G8 165 aa4.82□□□□□ -1.64
C9orf78-202ENST00000461349 SERP1Q9Y6X1 66 aa4.82□□□□□ -1.64
C9orf78-202ENST00000461349 SEC61GP60059 68 aa4.79□□□□□ -1.64
C9orf78-202ENST00000461349 MT1EP04732 61 aa4.75□□□□□ -1.65
C9orf78-202ENST00000461349 KRTAP19-7Q3SYF9 63 aa4.75□□□□□ -1.65
C9orf78-202ENST00000461349 SPRR5A0A1B0GTR4 108 aa4.72□□□□□ -1.65
C9orf78-202ENST00000461349 A0A1B0GU69 56 aa4.7□□□□□ -1.66
C9orf78-202ENST00000461349 RPS28P62857 69 aaKnown RBP4.7□□□□□ -1.66
C9orf78-202ENST00000461349 KRTAP5-3Q6L8H2 238 aa4.7□□□□□ -1.66
C9orf78-202ENST00000461349 PRR15LQ9BU68 103 aa4.7□□□□□ -1.66
C9orf78-202ENST00000461349 KRTAP4-6Q9BYQ5 205 aa4.69□□□□□ -1.66
C9orf78-202ENST00000461349 SMIM26A0A096LP01 95 aa4.68□□□□□ -1.66
C9orf78-202ENST00000461349 PP632Q6XCG6 107 aa4.68□□□□□ -1.66
C9orf78-202ENST00000461349 V9GYY9 64 aa4.68□□□□□ -1.66
C9orf78-202ENST00000461349 MT1GP13640 62 aa4.67□□□□□ -1.66
C9orf78-202ENST00000461349 KRTAP5-4Q6L8H1 288 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms