RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 RETNLBQ9BQ08 111 aa5.89□□□□□ -1.47
IFT88-204ENST00000461115 HRES1P13985 223 aa5.87□□□□□ -1.47
IFT88-204ENST00000461115 C9orf92A6NGG3 77 aa5.85□□□□□ -1.47
IFT88-204ENST00000461115 DMAC1Q96GE9 116 aa5.85□□□□□ -1.47
IFT88-204ENST00000461115 C7orf65Q6ZTY9 151 aa5.83□□□□□ -1.48
IFT88-204ENST00000461115 MYCBP2O75592 4640 aa5.83□□□□□ -1.48
IFT88-204ENST00000461115 Q1T7F1 81 aa5.82□□□□□ -1.48
IFT88-204ENST00000461115 COA5Q86WW8 74 aa5.82□□□□□ -1.48
IFT88-204ENST00000461115 IGKV2D-30A0A075B6S6 120 aa5.8□□□□□ -1.48
IFT88-204ENST00000461115 BIRC6Q9NR09 4857 aa5.79□□□□□ -1.48
IFT88-204ENST00000461115 ACYP2P14621 99 aa5.79□□□□□ -1.48
IFT88-204ENST00000461115 RPL37P61927 97 aaKnown RBP5.79□□□□□ -1.48
IFT88-204ENST00000461115 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
IFT88-204ENST00000461115 C4orf26Q17RF5 130 aa5.76□□□□□ -1.49
IFT88-204ENST00000461115 V9GYY9 64 aa5.76□□□□□ -1.49
IFT88-204ENST00000461115 HERC2O95714 4834 aa5.75□□□□□ -1.49
IFT88-204ENST00000461115 A8MUN3 132 aa5.75□□□□□ -1.49
IFT88-204ENST00000461115 TPRXLQ17RH7 258 aa5.74□□□□□ -1.49
IFT88-204ENST00000461115 SPINK7P58062 85 aa5.74□□□□□ -1.49
IFT88-204ENST00000461115 ABCA13Q86UQ4 5058 aa5.73□□□□□ -1.49
IFT88-204ENST00000461115 ATP11AUNQ6ZP68 121 aa5.72□□□□□ -1.49
IFT88-204ENST00000461115 MPLKIPQ8TAP9 179 aa5.71□□□□□ -1.5
IFT88-204ENST00000461115 LINC01558Q9Y6Z2 57 aa5.7□□□□□ -1.5
IFT88-204ENST00000461115 COX6B2Q6YFQ2 88 aa5.65□□□□□ -1.51
IFT88-204ENST00000461115 CHKB-CPT1BH3BT56 60 aa5.63□□□□□ -1.51
IFT88-204ENST00000461115 Q5VV11 94 aa5.63□□□□□ -1.51
IFT88-204ENST00000461115 PSPHP1O15172 72 aa5.59□□□□□ -1.51
IFT88-204ENST00000461115 PRR15LQ9BU68 103 aa5.58□□□□□ -1.52
IFT88-204ENST00000461115 LRP2P98164 4655 aa5.58□□□□□ -1.52
IFT88-204ENST00000461115 SPTSSBQ8NFR3 76 aa5.55□□□□□ -1.52
IFT88-204ENST00000461115 LPAP08519 4548 aa5.51□□□□□ -1.53
IFT88-204ENST00000461115 SEC61BP60468 96 aaKnown RBP5.5□□□□□ -1.53
IFT88-204ENST00000461115 PRO0628Q9UI54 55 aa5.5□□□□□ -1.53
IFT88-204ENST00000461115 MUC17Q685J3 4493 aa5.5□□□□□ -1.53
IFT88-204ENST00000461115 PCLOQ9Y6V0 5065 aa5.49□□□□□ -1.53
IFT88-204ENST00000461115 A0A1B0GU69 56 aa5.48□□□□□ -1.53
IFT88-204ENST00000461115 BRK1Q8WUW1 75 aa5.47□□□□□ -1.53
IFT88-204ENST00000461115 H1FX-AS1Q4G0G2 97 aa5.45□□□□□ -1.54
IFT88-204ENST00000461115 LCA10Q71F78 164 aa5.43□□□□□ -1.54
IFT88-204ENST00000461115 CDC42SE1Q9NRR8 79 aa5.43□□□□□ -1.54
IFT88-204ENST00000461115 A6NED7 52 aa5.42□□□□□ -1.54
IFT88-204ENST00000461115 RBM12B-AS1Q9P1G2 102 aa5.42□□□□□ -1.54
IFT88-204ENST00000461115 S4R3F8 94 aa5.41□□□□□ -1.54
IFT88-204ENST00000461115 SEC61GP60059 68 aa5.4□□□□□ -1.55
IFT88-204ENST00000461115 KRTAP4-1Q9BYQ7 146 aa5.4□□□□□ -1.55
IFT88-204ENST00000461115 HERC1Q15751 4861 aa5.39□□□□□ -1.55
IFT88-204ENST00000461115 SPATA8Q6RVD6 105 aa5.39□□□□□ -1.55
IFT88-204ENST00000461115 UQCR11O14957 56 aa5.38□□□□□ -1.55
IFT88-204ENST00000461115 HMCN2Q8NDA2 5059 aa5.38□□□□□ -1.55
IFT88-204ENST00000461115 A8MU10 97 aa5.37□□□□□ -1.55
IFT88-204ENST00000461115 KRTAP19-2Q3LHN2 52 aa5.36□□□□□ -1.55
IFT88-204ENST00000461115 KRTAP10-6P60371 365 aaPredicted RBP5.32□□□□□ -1.56
IFT88-204ENST00000461115 MIR22HGQ0VDD5 57 aa5.31□□□□□ -1.56
IFT88-204ENST00000461115 A0A1B0GU33 70 aa5.3□□□□□ -1.56
IFT88-204ENST00000461115 CSAG1Q6PB30 78 aa5.3□□□□□ -1.56
IFT88-204ENST00000461115 H0YAA0 97 aa5.29□□□□□ -1.56
IFT88-204ENST00000461115 FLGP20930 4061 aaPredicted RBP5.26□□□□□ -1.57
IFT88-204ENST00000461115 A6NN06 94 aa5.23□□□□□ -1.57
IFT88-204ENST00000461115 P0C880 135 aa5.2□□□□□ -1.58
IFT88-204ENST00000461115 PMAIP1Q13794 54 aa5.19□□□□□ -1.58
IFT88-204ENST00000461115 ADM2Q7Z4H4 148 aa5.17□□□□□ -1.58
IFT88-204ENST00000461115 A0A0A0MQY5 61 aa5.16□□□□□ -1.58
IFT88-204ENST00000461115 KRTAP13-4Q3LI77 160 aa5.16□□□□□ -1.58
IFT88-204ENST00000461115 MUC2Q02817 5179 aa5.15□□□□□ -1.59
IFT88-204ENST00000461115 RNF213Q63HN8 5207 aa5.15□□□□□ -1.59
IFT88-204ENST00000461115 M0QZ58 72 aa5.13□□□□□ -1.59
IFT88-204ENST00000461115 UBR4Q5T4S7 5183 aa5.09□□□□□ -1.59
IFT88-204ENST00000461115 KTN1-AS1Q86SY8 53 aa5.06□□□□□ -1.6
IFT88-204ENST00000461115 K7ERS5 55 aa5.01□□□□□ -1.61
IFT88-204ENST00000461115 LCE1AQ5T7P2 110 aa4.99□□□□□ -1.61
IFT88-204ENST00000461115 MT1HP80294 61 aa4.98□□□□□ -1.61
IFT88-204ENST00000461115 CRIPTQ9P021 101 aa4.98□□□□□ -1.61
IFT88-204ENST00000461115 KRTAP12-1P59990 96 aa4.97□□□□□ -1.61
IFT88-204ENST00000461115 R4GN34 69 aa4.97□□□□□ -1.61
IFT88-204ENST00000461115 A0A0D9SG42 100 aa4.97□□□□□ -1.61
IFT88-204ENST00000461115 KRTAP12-2P59991 146 aa4.95□□□□□ -1.62
IFT88-204ENST00000461115 FAT4Q6V0I7 4981 aa4.94□□□□□ -1.62
IFT88-204ENST00000461115 ROMO1P60602 79 aa4.88□□□□□ -1.63
IFT88-204ENST00000461115 SPINT4Q6UDR6 99 aa4.85□□□□□ -1.63
IFT88-204ENST00000461115 SPRR2GQ9BYE4 73 aa4.85□□□□□ -1.63
IFT88-204ENST00000461115 M0R2T5 61 aa4.82□□□□□ -1.64
IFT88-204ENST00000461115 MT2AP02795 61 aa4.82□□□□□ -1.64
IFT88-204ENST00000461115 PRAC1Q96KF2 57 aa4.82□□□□□ -1.64
IFT88-204ENST00000461115 LINC01554Q52M75 96 aa4.81□□□□□ -1.64
IFT88-204ENST00000461115 MT1FP04733 61 aa4.79□□□□□ -1.64
IFT88-204ENST00000461115 KRTAP25-1Q3LHN0 102 aa4.75□□□□□ -1.65
IFT88-204ENST00000461115 KRTAP10-10P60014 251 aa4.72□□□□□ -1.65
IFT88-204ENST00000461115 KRTAP19-8Q3LI54 63 aa4.72□□□□□ -1.65
IFT88-204ENST00000461115 C10orf95Q9H7T3 257 aa4.71□□□□□ -1.66
IFT88-204ENST00000461115 KRTAP10-7P60409 375 aaPredicted RBP4.68□□□□□ -1.66
IFT88-204ENST00000461115 KRTAP2-2Q9BYT5 123 aa4.66□□□□□ -1.66
IFT88-204ENST00000461115 CAMK2N1Q7Z7J9 78 aa4.64□□□□□ -1.67
IFT88-204ENST00000461115 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.63□□□□□ -1.67
IFT88-204ENST00000461115 PLAC4Q8WY50 150 aa4.62□□□□□ -1.67
IFT88-204ENST00000461115 MT1BP07438 61 aa4.6□□□□□ -1.67
IFT88-204ENST00000461115 MT3P25713 68 aa4.53□□□□□ -1.68
IFT88-204ENST00000461115 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
IFT88-204ENST00000461115 TNP1P09430 55 aa4.5□□□□□ -1.69
IFT88-204ENST00000461115 KRTAP10-5P60370 271 aa4.47□□□□□ -1.69
IFT88-204ENST00000461115 MT1XP80297 61 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms