RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 MT2AP02795 61 aa6.19□□□□□ -1.42
HDAC4-207ENST00000461113 C5orf47Q569G3 176 aa6.19□□□□□ -1.42
HDAC4-207ENST00000461113 CYP4F30PQ9H0H9 118 aa6.19□□□□□ -1.42
HDAC4-207ENST00000461113 C1orf64Q8NEQ6 169 aa6.17□□□□□ -1.42
HDAC4-207ENST00000461113 OCR1Q9BZK8 76 aa6.17□□□□□ -1.42
HDAC4-207ENST00000461113 SMIM20Q8N5G0 67 aa6.16□□□□□ -1.42
HDAC4-207ENST00000461113 LINC00208Q96KT6 92 aa6.16□□□□□ -1.42
HDAC4-207ENST00000461113 KRTAP9-9Q9BYP9 154 aa6.15□□□□□ -1.42
HDAC4-207ENST00000461113 KRTAP9-4Q9BYQ2 154 aa6.15□□□□□ -1.42
HDAC4-207ENST00000461113 KRTAP9-3Q9BYQ3 159 aa6.15□□□□□ -1.42
HDAC4-207ENST00000461113 H3BPC8 53 aa6.14□□□□□ -1.43
HDAC4-207ENST00000461113 MT1FP04733 61 aa6.14□□□□□ -1.43
HDAC4-207ENST00000461113 FAM236AA0A1B0GUQ0 79 aa6.13□□□□□ -1.43
HDAC4-207ENST00000461113 FAM236BA0A1B0GV22 79 aa6.13□□□□□ -1.43
HDAC4-207ENST00000461113 KRTAP19-6Q3LI70 58 aa6.13□□□□□ -1.43
HDAC4-207ENST00000461113 TRAV7A0A075B6U4 112 aa6.09□□□□□ -1.43
HDAC4-207ENST00000461113 KRTAP10-10P60014 251 aa6.09□□□□□ -1.43
HDAC4-207ENST00000461113 KRTAP20-1Q3LI63 56 aa6.09□□□□□ -1.43
HDAC4-207ENST00000461113 KRTAP4-8A0A0G2JLE6 195 aa6.06□□□□□ -1.44
HDAC4-207ENST00000461113 S4R3F8 94 aa6.06□□□□□ -1.44
HDAC4-207ENST00000461113 A8MUN3 132 aa6.03□□□□□ -1.44
HDAC4-207ENST00000461113 KRTAP3-1Q9BYR8 98 aa6.02□□□□□ -1.45
HDAC4-207ENST00000461113 MUC12Q9UKN1 5478 aa6.02□□□□□ -1.45
HDAC4-207ENST00000461113 KLKP1Q107X0 134 aa6.01□□□□□ -1.45
HDAC4-207ENST00000461113 CSAG1Q6PB30 78 aa6.01□□□□□ -1.45
HDAC4-207ENST00000461113 SERP2Q8N6R1 65 aa5.97□□□□□ -1.45
HDAC4-207ENST00000461113 LCA10Q71F78 164 aa5.96□□□□□ -1.46
HDAC4-207ENST00000461113 NDUFC1O43677 76 aa5.95□□□□□ -1.46
HDAC4-207ENST00000461113 C20orf197Q8N268 126 aa5.91□□□□□ -1.46
HDAC4-207ENST00000461113 SNURFQ9Y675 71 aa5.91□□□□□ -1.46
HDAC4-207ENST00000461113 DMAC1Q96GE9 116 aa5.89□□□□□ -1.47
HDAC4-207ENST00000461113 ACYP2P14621 99 aa5.87□□□□□ -1.47
HDAC4-207ENST00000461113 LCE1DQ5T752 114 aa5.87□□□□□ -1.47
HDAC4-207ENST00000461113 COX7CP15954 63 aa5.85□□□□□ -1.47
HDAC4-207ENST00000461113 KRTAP4-7Q9BYR0 210 aa5.85□□□□□ -1.47
HDAC4-207ENST00000461113 SPANXA2-OT1Q8N9U9 137 aa5.82□□□□□ -1.48
HDAC4-207ENST00000461113 ANAPC13Q9BS18 74 aa5.82□□□□□ -1.48
HDAC4-207ENST00000461113 CHKB-CPT1BH3BT56 60 aa5.81□□□□□ -1.48
HDAC4-207ENST00000461113 SPTSSBQ8NFR3 76 aa5.81□□□□□ -1.48
HDAC4-207ENST00000461113 MDN1Q9NU22 5596 aa5.8□□□□□ -1.48
HDAC4-207ENST00000461113 KMT2DO14686 5537 aa5.76□□□□□ -1.49
HDAC4-207ENST00000461113 KRTAP2-3P0C7H8 128 aa5.76□□□□□ -1.49
HDAC4-207ENST00000461113 KRTAP2-4Q9BYR9 128 aa5.76□□□□□ -1.49
HDAC4-207ENST00000461113 H0YAA0 97 aa5.75□□□□□ -1.49
HDAC4-207ENST00000461113 CRIPTQ9P021 101 aa5.73□□□□□ -1.49
HDAC4-207ENST00000461113 ADM2Q7Z4H4 148 aa5.72□□□□□ -1.49
HDAC4-207ENST00000461113 KRTAP4-9Q9BYQ8 210 aa5.71□□□□□ -1.5
HDAC4-207ENST00000461113 KRTAP5-9P26371 169 aa5.69□□□□□ -1.5
HDAC4-207ENST00000461113 H7BZZ5 65 aa5.66□□□□□ -1.5
HDAC4-207ENST00000461113 LCE4AQ5TA78 99 aa5.65□□□□□ -1.5
HDAC4-207ENST00000461113 A6NN06 94 aa5.64□□□□□ -1.51
HDAC4-207ENST00000461113 COA5Q86WW8 74 aa5.63□□□□□ -1.51
HDAC4-207ENST00000461113 CCDC179H3BU77 68 aa5.62□□□□□ -1.51
HDAC4-207ENST00000461113 SPRR2GQ9BYE4 73 aa5.62□□□□□ -1.51
HDAC4-207ENST00000461113 Q5VV11 94 aa5.6□□□□□ -1.51
HDAC4-207ENST00000461113 KRTAP4-2Q9BYR5 136 aa5.6□□□□□ -1.51
HDAC4-207ENST00000461113 CYSTM1Q9H1C7 97 aa5.6□□□□□ -1.51
HDAC4-207ENST00000461113 R4GN34 69 aa5.6□□□□□ -1.51
HDAC4-207ENST00000461113 ATP5EP56381 51 aaPredicted RBP5.57□□□□□ -1.52
HDAC4-207ENST00000461113 P0C880 135 aa5.56□□□□□ -1.52
HDAC4-207ENST00000461113 SEC61GP60059 68 aa5.56□□□□□ -1.52
HDAC4-207ENST00000461113 GPR98Q8WXG9 6306 aa5.56□□□□□ -1.52
HDAC4-207ENST00000461113 M0QZ58 72 aa5.54□□□□□ -1.52
HDAC4-207ENST00000461113 KRTAP19-8Q3LI54 63 aa5.54□□□□□ -1.52
HDAC4-207ENST00000461113 KRTAP2-2Q9BYT5 123 aa5.54□□□□□ -1.52
HDAC4-207ENST00000461113 KRTAP2-1Q9BYU5 128 aa5.54□□□□□ -1.52
HDAC4-207ENST00000461113 SERP1Q9Y6X1 66 aa5.52□□□□□ -1.53
HDAC4-207ENST00000461113 KRTAP4-11Q9BYQ6 195 aa5.5□□□□□ -1.53
HDAC4-207ENST00000461113 TMEM258P61165 79 aa5.49□□□□□ -1.53
HDAC4-207ENST00000461113 SPRR2EP22531 72 aa5.47□□□□□ -1.53
HDAC4-207ENST00000461113 SPRR2BP35325 72 aa5.47□□□□□ -1.53
HDAC4-207ENST00000461113 SPRR2AP35326 72 aa5.47□□□□□ -1.53
HDAC4-207ENST00000461113 KRTAP19-4Q3LI73 84 aa5.47□□□□□ -1.53
HDAC4-207ENST00000461113 PLAC4Q8WY50 150 aa5.47□□□□□ -1.53
HDAC4-207ENST00000461113 MT1BP07438 61 aa5.46□□□□□ -1.54
HDAC4-207ENST00000461113 LINC01554Q52M75 96 aa5.46□□□□□ -1.54
HDAC4-207ENST00000461113 KRTAP10-5P60370 271 aa5.45□□□□□ -1.54
HDAC4-207ENST00000461113 SPRR2FQ96RM1 72 aa5.4□□□□□ -1.54
HDAC4-207ENST00000461113 A0A1B0GU69 56 aa5.39□□□□□ -1.55
HDAC4-207ENST00000461113 LCE5AQ5TCM9 118 aa5.37□□□□□ -1.55
HDAC4-207ENST00000461113 PRR15LQ9BU68 103 aa5.36□□□□□ -1.55
HDAC4-207ENST00000461113 PRO2289Q9P1D8 64 aa5.36□□□□□ -1.55
HDAC4-207ENST00000461113 A0A1B0GU33 70 aa5.35□□□□□ -1.55
HDAC4-207ENST00000461113 H3BS24 57 aa5.35□□□□□ -1.55
HDAC4-207ENST00000461113 LCE1AQ5T7P2 110 aa5.31□□□□□ -1.56
HDAC4-207ENST00000461113 SPRR2DP22532 72 aa5.3□□□□□ -1.56
HDAC4-207ENST00000461113 PCP4P48539 62 aa5.27□□□□□ -1.57
HDAC4-207ENST00000461113 KRTAP13-4Q3LI77 160 aa5.26□□□□□ -1.57
HDAC4-207ENST00000461113 LINC01558Q9Y6Z2 57 aa5.26□□□□□ -1.57
HDAC4-207ENST00000461113 SMIM26A0A096LP01 95 aa5.24□□□□□ -1.57
HDAC4-207ENST00000461113 A0A0D9SG42 100 aa5.24□□□□□ -1.57
HDAC4-207ENST00000461113 SPATA8Q6RVD6 105 aa5.24□□□□□ -1.57
HDAC4-207ENST00000461113 CAMK2N1Q7Z7J9 78 aa5.22□□□□□ -1.57
HDAC4-207ENST00000461113 V9GYY9 64 aa5.22□□□□□ -1.57
HDAC4-207ENST00000461113 MT1XP80297 61 aa5.2□□□□□ -1.58
HDAC4-207ENST00000461113 SPINT4Q6UDR6 99 aa5.18□□□□□ -1.58
HDAC4-207ENST00000461113 KRTAP8-1Q8IUC2 63 aa5.17□□□□□ -1.58
HDAC4-207ENST00000461113 UQCR11O14957 56 aa5.14□□□□□ -1.59
HDAC4-207ENST00000461113 DSTQ03001 7570 aaKnown RBP5.1□□□□□ -1.59
HDAC4-207ENST00000461113 Q1T7F1 81 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms