RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 KRTAP13-3Q3SY46 172 aa6.19□□□□□ -1.42
APTX-209ENST00000460940 PRAC1Q96KF2 57 aa6.19□□□□□ -1.42
APTX-209ENST00000460940 HRES1P13985 223 aa6.18□□□□□ -1.42
APTX-209ENST00000460940 IGHV6-1A0A0B4J1U7 121 aa6.17□□□□□ -1.42
APTX-209ENST00000460940 PCOTHQ58A44 107 aa6.15□□□□□ -1.43
APTX-209ENST00000460940 NOTCH2NLQ7Z3S9 236 aa6.13□□□□□ -1.43
APTX-209ENST00000460940 SPATA8Q6RVD6 105 aa6.09□□□□□ -1.44
APTX-209ENST00000460940 XP32Q5T750 250 aa6.08□□□□□ -1.44
APTX-209ENST00000460940 MUC17Q685J3 4493 aa6.08□□□□□ -1.44
APTX-209ENST00000460940 ADM2Q7Z4H4 148 aa6.07□□□□□ -1.44
APTX-209ENST00000460940 C8orf17Q9NRJ1 99 aa6.07□□□□□ -1.44
APTX-209ENST00000460940 RNF213Q63HN8 5207 aa6.06□□□□□ -1.44
APTX-209ENST00000460940 C9orf92A6NGG3 77 aa6.06□□□□□ -1.44
APTX-209ENST00000460940 SEC61BP60468 96 aaKnown RBP6.05□□□□□ -1.44
APTX-209ENST00000460940 Q96NJ1 140 aa6.05□□□□□ -1.44
APTX-209ENST00000460940 ACYP2P14621 99 aa6.02□□□□□ -1.44
APTX-209ENST00000460940 MRPL34Q9BQ48 92 aaKnown RBP6.01□□□□□ -1.45
APTX-209ENST00000460940 A0A1B0GVX0 72 aa6□□□□□ -1.45
APTX-209ENST00000460940 A0A1B0GU69 56 aa5.98□□□□□ -1.45
APTX-209ENST00000460940 RPL37P61927 97 aaKnown RBP5.98□□□□□ -1.45
APTX-209ENST00000460940 MIR22HGQ0VDD5 57 aa5.98□□□□□ -1.45
APTX-209ENST00000460940 DMAC1Q96GE9 116 aa5.98□□□□□ -1.45
APTX-209ENST00000460940 ROMO1P60602 79 aa5.97□□□□□ -1.45
APTX-209ENST00000460940 UQCR11O14957 56 aa5.96□□□□□ -1.45
APTX-209ENST00000460940 MUC2Q02817 5179 aa5.96□□□□□ -1.46
APTX-209ENST00000460940 CSAG1Q6PB30 78 aa5.95□□□□□ -1.46
APTX-209ENST00000460940 C20orf166-AS1Q96NR2 134 aa5.92□□□□□ -1.46
APTX-209ENST00000460940 A8MUU9 505 aa5.9□□□□□ -1.46
APTX-209ENST00000460940 KRTAP4-1Q9BYQ7 146 aa5.89□□□□□ -1.47
APTX-209ENST00000460940 KRTAP16-1A8MUX0 517 aa5.88□□□□□ -1.47
APTX-209ENST00000460940 LCE2CQ5TA81 110 aa5.88□□□□□ -1.47
APTX-209ENST00000460940 Q5W150 140 aa5.87□□□□□ -1.47
APTX-209ENST00000460940 LORP23490 312 aaPredicted RBP5.82□□□□□ -1.48
APTX-209ENST00000460940 KRTAP4-8Q9BYQ9 185 aa5.81□□□□□ -1.48
APTX-209ENST00000460940 FAT4Q6V0I7 4981 aa5.81□□□□□ -1.48
APTX-209ENST00000460940 KRTAP25-1Q3LHN0 102 aa5.8□□□□□ -1.48
APTX-209ENST00000460940 IGKV2-30P06310 120 aa5.79□□□□□ -1.48
APTX-209ENST00000460940 P0C880 135 aa5.78□□□□□ -1.48
APTX-209ENST00000460940 KRTAP19-2Q3LHN2 52 aa5.74□□□□□ -1.49
APTX-209ENST00000460940 IGKV2D-30A0A075B6S6 120 aa5.7□□□□□ -1.5
APTX-209ENST00000460940 COX6B2Q6YFQ2 88 aa5.7□□□□□ -1.5
APTX-209ENST00000460940 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.69□□□□□ -1.5
APTX-209ENST00000460940 KRTAP9-2Q9BYQ4 174 aa5.69□□□□□ -1.5
APTX-209ENST00000460940 KRTAP9-6A0A140TA67 174 aa5.66□□□□□ -1.5
APTX-209ENST00000460940 FLGP20930 4061 aaPredicted RBP5.64□□□□□ -1.51
APTX-209ENST00000460940 MT1HP80294 61 aa5.64□□□□□ -1.51
APTX-209ENST00000460940 H0YAA0 97 aa5.64□□□□□ -1.51
APTX-209ENST00000460940 M0R2T5 61 aa5.57□□□□□ -1.52
APTX-209ENST00000460940 LUZP6Q538Z0 58 aa5.56□□□□□ -1.52
APTX-209ENST00000460940 LCE3BQ5TA77 95 aa5.55□□□□□ -1.52
APTX-209ENST00000460940 A0A1B0GU33 70 aa5.54□□□□□ -1.52
APTX-209ENST00000460940 NDUFAF8A1L188 74 aa5.54□□□□□ -1.52
APTX-209ENST00000460940 K7ERS5 55 aa5.54□□□□□ -1.52
APTX-209ENST00000460940 H1FX-AS1Q4G0G2 97 aa5.54□□□□□ -1.52
APTX-209ENST00000460940 KRTAP10-6P60371 365 aaPredicted RBP5.51□□□□□ -1.53
APTX-209ENST00000460940 KRTAP15-1Q3LI76 137 aa5.47□□□□□ -1.53
APTX-209ENST00000460940 KRTAP4-8A0A0G2JLE6 195 aa5.41□□□□□ -1.54
APTX-209ENST00000460940 SPINT4Q6UDR6 99 aa5.41□□□□□ -1.54
APTX-209ENST00000460940 KRTAP4-12Q9BQ66 201 aa5.41□□□□□ -1.54
APTX-209ENST00000460940 KRTAP9-9Q9BYP9 154 aa5.4□□□□□ -1.55
APTX-209ENST00000460940 KRTAP9-4Q9BYQ2 154 aa5.4□□□□□ -1.55
APTX-209ENST00000460940 CRIPTQ9P021 101 aa5.4□□□□□ -1.55
APTX-209ENST00000460940 KRTAP9-8Q9BYQ0 159 aa5.37□□□□□ -1.55
APTX-209ENST00000460940 KRTAP3-1Q9BYR8 98 aa5.33□□□□□ -1.56
APTX-209ENST00000460940 MT2AP02795 61 aa5.32□□□□□ -1.56
APTX-209ENST00000460940 S4R3F8 94 aa5.3□□□□□ -1.56
APTX-209ENST00000460940 MT1FP04733 61 aa5.27□□□□□ -1.57
APTX-209ENST00000460940 KRTAP10-10P60014 251 aa5.26□□□□□ -1.57
APTX-209ENST00000460940 KRTAP4-7Q9BYR0 210 aa5.26□□□□□ -1.57
APTX-209ENST00000460940 KRTAP19-1Q8IUB9 90 aa5.2□□□□□ -1.58
APTX-209ENST00000460940 KRTAP9-3Q9BYQ3 159 aa5.2□□□□□ -1.58
APTX-209ENST00000460940 C10orf95Q9H7T3 257 aa5.19□□□□□ -1.58
APTX-209ENST00000460940 LCE1DQ5T752 114 aa5.18□□□□□ -1.58
APTX-209ENST00000460940 CAMK2N1Q7Z7J9 78 aa5.17□□□□□ -1.58
APTX-209ENST00000460940 KRTAP13-4Q3LI77 160 aa5.16□□□□□ -1.58
APTX-209ENST00000460940 CRCT1Q9UGL9 99 aa5.15□□□□□ -1.58
APTX-209ENST00000460940 FSIP2Q5CZC0 6907 aa5.14□□□□□ -1.59
APTX-209ENST00000460940 A0A0D9SG42 100 aa5.12□□□□□ -1.59
APTX-209ENST00000460940 USH2AO75445 5202 aa5.09□□□□□ -1.59
APTX-209ENST00000460940 KRTAP4-9Q9BYQ8 210 aa5.06□□□□□ -1.6
APTX-209ENST00000460940 KRTAP12-2P59991 146 aa5.05□□□□□ -1.6
APTX-209ENST00000460940 KRTAP12-1P59990 96 aa5.02□□□□□ -1.61
APTX-209ENST00000460940 KRTAP4-2Q9BYR5 136 aa5.01□□□□□ -1.61
APTX-209ENST00000460940 SSPOA2VEC9 5147 aa5.01□□□□□ -1.61
APTX-209ENST00000460940 SPRR2GQ9BYE4 73 aa5□□□□□ -1.61
APTX-209ENST00000460940 KRTAP19-8Q3LI54 63 aa4.94□□□□□ -1.62
APTX-209ENST00000460940 KRTAP19-6Q3LI70 58 aa4.93□□□□□ -1.62
APTX-209ENST00000460940 M0QZ58 72 aa4.92□□□□□ -1.62
APTX-209ENST00000460940 PLAC4Q8WY50 150 aa4.91□□□□□ -1.62
APTX-209ENST00000460940 MT1BP07438 61 aa4.89□□□□□ -1.63
APTX-209ENST00000460940 FCGBPQ9Y6R7 5405 aaPredicted RBP4.87□□□□□ -1.63
APTX-209ENST00000460940 PRO2289Q9P1D8 64 aa4.86□□□□□ -1.63
APTX-209ENST00000460940 R4GN34 69 aa4.86□□□□□ -1.63
APTX-209ENST00000460940 KRTAP4-11Q9BYQ6 195 aa4.82□□□□□ -1.64
APTX-209ENST00000460940 KRTAP10-5P60370 271 aa4.75□□□□□ -1.65
APTX-209ENST00000460940 PP632Q6XCG6 107 aa4.75□□□□□ -1.65
APTX-209ENST00000460940 KRTAP5-3Q6L8H2 238 aa4.73□□□□□ -1.65
APTX-209ENST00000460940 MACF1Q9UPN3 7388 aaKnown RBP4.72□□□□□ -1.65
APTX-209ENST00000460940 KRTAP9-7A8MTY7 169 aa4.66□□□□□ -1.66
APTX-209ENST00000460940 MT1XP80297 61 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms