RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 LCA10Q71F78 164 aa5.33□□□□□ -1.56
CSDC2-202ENST00000460790 KRTAP3-3Q9BYR6 98 aa5.32□□□□□ -1.56
CSDC2-202ENST00000460790 CHKB-CPT1BH3BT56 60 aa5.31□□□□□ -1.56
CSDC2-202ENST00000460790 SERP1Q9Y6X1 66 aa5.31□□□□□ -1.56
CSDC2-202ENST00000460790 MT1HP80294 61 aa5.29□□□□□ -1.56
CSDC2-202ENST00000460790 FAT4Q6V0I7 4981 aa5.26□□□□□ -1.57
CSDC2-202ENST00000460790 RPS28P62857 69 aaKnown RBP5.26□□□□□ -1.57
CSDC2-202ENST00000460790 CSAG1Q6PB30 78 aa5.26□□□□□ -1.57
CSDC2-202ENST00000460790 SPTSSBQ8NFR3 76 aa5.26□□□□□ -1.57
CSDC2-202ENST00000460790 M0R2T5 61 aa5.21□□□□□ -1.58
CSDC2-202ENST00000460790 LCE2AQ5TA79 106 aaPredicted RBP5.2□□□□□ -1.58
CSDC2-202ENST00000460790 SMIM26A0A096LP01 95 aa5.16□□□□□ -1.58
CSDC2-202ENST00000460790 H0YAA0 97 aa5.14□□□□□ -1.59
CSDC2-202ENST00000460790 KRTAP10-6P60371 365 aaPredicted RBP5.12□□□□□ -1.59
CSDC2-202ENST00000460790 LINC01558Q9Y6Z2 57 aa5.12□□□□□ -1.59
CSDC2-202ENST00000460790 LORP23490 312 aaPredicted RBP5.1□□□□□ -1.59
CSDC2-202ENST00000460790 Q1T7F1 81 aa5.1□□□□□ -1.59
CSDC2-202ENST00000460790 ADM2Q7Z4H4 148 aa5.1□□□□□ -1.59
CSDC2-202ENST00000460790 KRTAP9-8Q9BYQ0 159 aa5.09□□□□□ -1.59
CSDC2-202ENST00000460790 KRTAP3-2Q9BYR7 98 aa5.09□□□□□ -1.59
CSDC2-202ENST00000460790 V9GYY9 64 aa5.09□□□□□ -1.59
CSDC2-202ENST00000460790 SEC61GP60059 68 aa5.08□□□□□ -1.6
CSDC2-202ENST00000460790 A0A1B0GU69 56 aa5.06□□□□□ -1.6
CSDC2-202ENST00000460790 MT2AP02795 61 aa5.05□□□□□ -1.6
CSDC2-202ENST00000460790 P0C880 135 aa5.05□□□□□ -1.6
CSDC2-202ENST00000460790 PRR15LQ9BU68 103 aa5.03□□□□□ -1.6
CSDC2-202ENST00000460790 MT1FP04733 61 aa5.01□□□□□ -1.61
CSDC2-202ENST00000460790 KRTAP10-10P60014 251 aa5□□□□□ -1.61
CSDC2-202ENST00000460790 PSPHP1O15172 72 aa4.99□□□□□ -1.61
CSDC2-202ENST00000460790 A0A1B0GU33 70 aa4.97□□□□□ -1.61
CSDC2-202ENST00000460790 CRIPTQ9P021 101 aa4.97□□□□□ -1.61
CSDC2-202ENST00000460790 Q5VV11 94 aa4.96□□□□□ -1.62
CSDC2-202ENST00000460790 M0QZ58 72 aa4.93□□□□□ -1.62
CSDC2-202ENST00000460790 KRTAP9-3Q9BYQ3 159 aa4.92□□□□□ -1.62
CSDC2-202ENST00000460790 R4GN34 69 aa4.92□□□□□ -1.62
CSDC2-202ENST00000460790 KRTAP13-4Q3LI77 160 aa4.9□□□□□ -1.63
CSDC2-202ENST00000460790 UQCR11O14957 56 aa4.89□□□□□ -1.63
CSDC2-202ENST00000460790 KRTAP19-1Q8IUB9 90 aa4.89□□□□□ -1.63
CSDC2-202ENST00000460790 SPRR2GQ9BYE4 73 aa4.89□□□□□ -1.63
CSDC2-202ENST00000460790 SPATA8Q6RVD6 105 aa4.88□□□□□ -1.63
CSDC2-202ENST00000460790 A6NED7 52 aa4.83□□□□□ -1.64
CSDC2-202ENST00000460790 MIR22HGQ0VDD5 57 aa4.82□□□□□ -1.64
CSDC2-202ENST00000460790 LINC01554Q52M75 96 aa4.8□□□□□ -1.64
CSDC2-202ENST00000460790 LCE2BO14633 110 aa4.79□□□□□ -1.64
CSDC2-202ENST00000460790 KRTAP19-8Q3LI54 63 aa4.79□□□□□ -1.64
CSDC2-202ENST00000460790 LCE2DQ5TA82 110 aaPredicted RBP4.79□□□□□ -1.64
CSDC2-202ENST00000460790 A0A0D9SG42 100 aa4.78□□□□□ -1.64
CSDC2-202ENST00000460790 A8MU10 97 aa4.78□□□□□ -1.64
CSDC2-202ENST00000460790 A6NN06 94 aa4.75□□□□□ -1.65
CSDC2-202ENST00000460790 CDC42SE1Q9NRR8 79 aa4.75□□□□□ -1.65
CSDC2-202ENST00000460790 MT1BP07438 61 aa4.73□□□□□ -1.65
CSDC2-202ENST00000460790 KRTAP12-1P59990 96 aa4.72□□□□□ -1.65
CSDC2-202ENST00000460790 PLAC4Q8WY50 150 aa4.7□□□□□ -1.66
CSDC2-202ENST00000460790 SPINT4Q6UDR6 99 aa4.69□□□□□ -1.66
CSDC2-202ENST00000460790 KRTAP12-2P59991 146 aa4.68□□□□□ -1.66
CSDC2-202ENST00000460790 BRK1Q8WUW1 75 aa4.67□□□□□ -1.66
CSDC2-202ENST00000460790 KRTAP9-2Q9BYQ4 174 aa4.65□□□□□ -1.67
CSDC2-202ENST00000460790 USH2AO75445 5202 aa4.64□□□□□ -1.67
CSDC2-202ENST00000460790 K7ERS5 55 aa4.62□□□□□ -1.67
CSDC2-202ENST00000460790 CAMK2N1Q7Z7J9 78 aa4.58□□□□□ -1.68
CSDC2-202ENST00000460790 KRTAP19-6Q3LI70 58 aa4.55□□□□□ -1.68
CSDC2-202ENST00000460790 MT1XP80297 61 aa4.54□□□□□ -1.68
CSDC2-202ENST00000460790 KRTAP10-5P60370 271 aa4.53□□□□□ -1.68
CSDC2-202ENST00000460790 PRO2289Q9P1D8 64 aa4.51□□□□□ -1.69
CSDC2-202ENST00000460790 KRTAP9-6A0A140TA67 174 aa4.5□□□□□ -1.69
CSDC2-202ENST00000460790 PRO0628Q9UI54 55 aa4.5□□□□□ -1.69
CSDC2-202ENST00000460790 SSPOA2VEC9 5147 aa4.49□□□□□ -1.69
CSDC2-202ENST00000460790 C10orf95Q9H7T3 257 aa4.48□□□□□ -1.69
CSDC2-202ENST00000460790 CRCT1Q9UGL9 99 aa4.47□□□□□ -1.69
CSDC2-202ENST00000460790 FSIP2Q5CZC0 6907 aa4.46□□□□□ -1.7
CSDC2-202ENST00000460790 PMAIP1Q13794 54 aa4.43□□□□□ -1.7
CSDC2-202ENST00000460790 ROMO1P60602 79 aa4.42□□□□□ -1.7
CSDC2-202ENST00000460790 FCGBPQ9Y6R7 5405 aaPredicted RBP4.36□□□□□ -1.71
CSDC2-202ENST00000460790 TNP1P09430 55 aa4.35□□□□□ -1.71
CSDC2-202ENST00000460790 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
CSDC2-202ENST00000460790 KRTAP25-1Q3LHN0 102 aa4.33□□□□□ -1.72
CSDC2-202ENST00000460790 KRTAP10-12P60413 245 aa4.32□□□□□ -1.72
CSDC2-202ENST00000460790 KRTAP4-8A0A0G2JLE6 195 aa4.21□□□□□ -1.74
CSDC2-202ENST00000460790 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
CSDC2-202ENST00000460790 KRTAP4-8Q9BYQ9 185 aa4.21□□□□□ -1.74
CSDC2-202ENST00000460790 LCE3AQ5TA76 89 aa4.19□□□□□ -1.74
CSDC2-202ENST00000460790 KTN1-AS1Q86SY8 53 aa4.18□□□□□ -1.74
CSDC2-202ENST00000460790 SVIPQ8NHG7 77 aa4.17□□□□□ -1.74
CSDC2-202ENST00000460790 KMT2DO14686 5537 aa4.15□□□□□ -1.74
CSDC2-202ENST00000460790 PP632Q6XCG6 107 aa4.15□□□□□ -1.75
CSDC2-202ENST00000460790 PRAC1Q96KF2 57 aa4.15□□□□□ -1.75
CSDC2-202ENST00000460790 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.14□□□□□ -1.75
CSDC2-202ENST00000460790 KRTAP8-1Q8IUC2 63 aa4.13□□□□□ -1.75
CSDC2-202ENST00000460790 KRTAP19-5Q3LI72 72 aa4.07□□□□□ -1.76
CSDC2-202ENST00000460790 KRTAP19-7Q3SYF9 63 aa4.06□□□□□ -1.76
CSDC2-202ENST00000460790 MACF1Q9UPN3 7388 aaKnown RBP4.05□□□□□ -1.76
CSDC2-202ENST00000460790 KRTAP12-3P60328 96 aa4.03□□□□□ -1.76
CSDC2-202ENST00000460790 KRTAP5-9P26371 169 aa4.02□□□□□ -1.77
CSDC2-202ENST00000460790 KRTAP6-3Q3LI67 103 aa4.02□□□□□ -1.77
CSDC2-202ENST00000460790 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
CSDC2-202ENST00000460790 KRTAP9-7A8MTY7 169 aa3.99□□□□□ -1.77
CSDC2-202ENST00000460790 MT1EP04732 61 aa3.99□□□□□ -1.77
CSDC2-202ENST00000460790 SYNE2Q8WXH0 6885 aaKnown RBP3.97□□□□□ -1.77
CSDC2-202ENST00000460790 KRTAP15-1Q3LI76 137 aa3.93□□□□□ -1.78
CSDC2-202ENST00000460790 MT1LQ93083 61 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms