RNA–Protein interactions for RNA: ENST00000460677.5

PCYT1A-212, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-212ENST00000460677 KRTAP19-2Q3LHN2 52 aa7.87□□□□□ -1.15
PCYT1A-212ENST00000460677 S4R3F8 94 aa7.86□□□□□ -1.15
PCYT1A-212ENST00000460677 SPTSSBQ8NFR3 76 aa7.84□□□□□ -1.16
PCYT1A-212ENST00000460677 UBR4Q5T4S7 5183 aa7.83□□□□□ -1.16
PCYT1A-212ENST00000460677 LCA10Q71F78 164 aa7.83□□□□□ -1.16
PCYT1A-212ENST00000460677 MUC2Q02817 5179 aa7.8□□□□□ -1.16
PCYT1A-212ENST00000460677 RNF213Q63HN8 5207 aa7.76□□□□□ -1.17
PCYT1A-212ENST00000460677 Q1T7F1 81 aa7.75□□□□□ -1.17
PCYT1A-212ENST00000460677 V9GYY9 64 aa7.73□□□□□ -1.17
PCYT1A-212ENST00000460677 LCE2CQ5TA81 110 aa7.72□□□□□ -1.17
PCYT1A-212ENST00000460677 LINC01558Q9Y6Z2 57 aa7.71□□□□□ -1.17
PCYT1A-212ENST00000460677 CSAG1Q6PB30 78 aa7.7□□□□□ -1.18
PCYT1A-212ENST00000460677 A0A1B0GU69 56 aa7.61□□□□□ -1.19
PCYT1A-212ENST00000460677 PRR15LQ9BU68 103 aa7.61□□□□□ -1.19
PCYT1A-212ENST00000460677 SEC61GP60059 68 aa7.6□□□□□ -1.19
PCYT1A-212ENST00000460677 PSPHP1O15172 72 aa7.59□□□□□ -1.19
PCYT1A-212ENST00000460677 MT1HP80294 61 aa7.57□□□□□ -1.2
PCYT1A-212ENST00000460677 FLGP20930 4061 aaPredicted RBP7.56□□□□□ -1.2
PCYT1A-212ENST00000460677 Q5VV11 94 aa7.54□□□□□ -1.2
PCYT1A-212ENST00000460677 H0YAA0 97 aa7.53□□□□□ -1.2
PCYT1A-212ENST00000460677 LCE2BO14633 110 aa7.52□□□□□ -1.21
PCYT1A-212ENST00000460677 FAT4Q6V0I7 4981 aa7.5□□□□□ -1.21
PCYT1A-212ENST00000460677 ADM2Q7Z4H4 148 aa7.5□□□□□ -1.21
PCYT1A-212ENST00000460677 M0R2T5 61 aa7.49□□□□□ -1.21
PCYT1A-212ENST00000460677 KRTAP10-6P60371 365 aaPredicted RBP7.48□□□□□ -1.21
PCYT1A-212ENST00000460677 P0C880 135 aa7.44□□□□□ -1.22
PCYT1A-212ENST00000460677 A0A1B0GU33 70 aa7.41□□□□□ -1.22
PCYT1A-212ENST00000460677 A6NED7 52 aa7.37□□□□□ -1.23
PCYT1A-212ENST00000460677 UQCR11O14957 56 aa7.37□□□□□ -1.23
PCYT1A-212ENST00000460677 LCE2AQ5TA79 106 aaPredicted RBP7.33□□□□□ -1.24
PCYT1A-212ENST00000460677 MIR22HGQ0VDD5 57 aa7.28□□□□□ -1.24
PCYT1A-212ENST00000460677 KRTAP9-8Q9BYQ0 159 aa7.28□□□□□ -1.24
PCYT1A-212ENST00000460677 LORP23490 312 aaPredicted RBP7.27□□□□□ -1.25
PCYT1A-212ENST00000460677 SPATA8Q6RVD6 105 aa7.27□□□□□ -1.25
PCYT1A-212ENST00000460677 M0QZ58 72 aa7.26□□□□□ -1.25
PCYT1A-212ENST00000460677 KRTAP13-4Q3LI77 160 aa7.26□□□□□ -1.25
PCYT1A-212ENST00000460677 MT2AP02795 61 aa7.25□□□□□ -1.25
PCYT1A-212ENST00000460677 R4GN34 69 aa7.24□□□□□ -1.25
PCYT1A-212ENST00000460677 CDC42SE1Q9NRR8 79 aa7.23□□□□□ -1.25
PCYT1A-212ENST00000460677 CRIPTQ9P021 101 aa7.23□□□□□ -1.25
PCYT1A-212ENST00000460677 BRK1Q8WUW1 75 aa7.22□□□□□ -1.25
PCYT1A-212ENST00000460677 MT1FP04733 61 aa7.2□□□□□ -1.26
PCYT1A-212ENST00000460677 KRTAP10-10P60014 251 aa7.2□□□□□ -1.26
PCYT1A-212ENST00000460677 A8MU10 97 aa7.17□□□□□ -1.26
PCYT1A-212ENST00000460677 A0A0D9SG42 100 aa7.12□□□□□ -1.27
PCYT1A-212ENST00000460677 LINC01554Q52M75 96 aa7.08□□□□□ -1.28
PCYT1A-212ENST00000460677 SPRR2GQ9BYE4 73 aa7.08□□□□□ -1.28
PCYT1A-212ENST00000460677 KRTAP19-1Q8IUB9 90 aa7.07□□□□□ -1.28
PCYT1A-212ENST00000460677 PRO0628Q9UI54 55 aa7.04□□□□□ -1.28
PCYT1A-212ENST00000460677 KRTAP9-3Q9BYQ3 159 aa7.03□□□□□ -1.28
PCYT1A-212ENST00000460677 A6NN06 94 aa6.99□□□□□ -1.29
PCYT1A-212ENST00000460677 KRTAP12-1P59990 96 aa6.99□□□□□ -1.29
PCYT1A-212ENST00000460677 K7ERS5 55 aa6.97□□□□□ -1.29
PCYT1A-212ENST00000460677 KRTAP12-2P59991 146 aa6.96□□□□□ -1.29
PCYT1A-212ENST00000460677 SPINT4Q6UDR6 99 aa6.96□□□□□ -1.29
PCYT1A-212ENST00000460677 KRTAP19-8Q3LI54 63 aa6.91□□□□□ -1.3
PCYT1A-212ENST00000460677 PMAIP1Q13794 54 aa6.84□□□□□ -1.31
PCYT1A-212ENST00000460677 PLAC4Q8WY50 150 aa6.84□□□□□ -1.31
PCYT1A-212ENST00000460677 MT1BP07438 61 aa6.82□□□□□ -1.32
PCYT1A-212ENST00000460677 CAMK2N1Q7Z7J9 78 aa6.77□□□□□ -1.33
PCYT1A-212ENST00000460677 ROMO1P60602 79 aa6.67□□□□□ -1.34
PCYT1A-212ENST00000460677 C10orf95Q9H7T3 257 aa6.62□□□□□ -1.35
PCYT1A-212ENST00000460677 USH2AO75445 5202 aa6.59□□□□□ -1.35
PCYT1A-212ENST00000460677 LOC100996750A0A140TA64 210 aa6.58□□□□□ -1.36
PCYT1A-212ENST00000460677 KRTAP4-6Q9BYQ5 205 aa6.58□□□□□ -1.36
PCYT1A-212ENST00000460677 MT1XP80297 61 aa6.57□□□□□ -1.36
PCYT1A-212ENST00000460677 KRTAP10-5P60370 271 aa6.57□□□□□ -1.36
PCYT1A-212ENST00000460677 KTN1-AS1Q86SY8 53 aa6.53□□□□□ -1.36
PCYT1A-212ENST00000460677 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
PCYT1A-212ENST00000460677 KRTAP25-1Q3LHN0 102 aa6.45□□□□□ -1.38
PCYT1A-212ENST00000460677 KRTAP19-6Q3LI70 58 aa6.44□□□□□ -1.38
PCYT1A-212ENST00000460677 KRTAP9-2Q9BYQ4 174 aa6.44□□□□□ -1.38
PCYT1A-212ENST00000460677 TNP1P09430 55 aa6.44□□□□□ -1.38
PCYT1A-212ENST00000460677 PRAC1Q96KF2 57 aa6.41□□□□□ -1.38
PCYT1A-212ENST00000460677 SSPOA2VEC9 5147 aa6.38□□□□□ -1.39
PCYT1A-212ENST00000460677 KRTAP10-7P60409 375 aaPredicted RBP6.31□□□□□ -1.4
PCYT1A-212ENST00000460677 FSIP2Q5CZC0 6907 aa6.28□□□□□ -1.4
PCYT1A-212ENST00000460677 KRTAP23-1A1A580 65 aa6.24□□□□□ -1.41
PCYT1A-212ENST00000460677 KRTAP10-12P60413 245 aa6.24□□□□□ -1.41
PCYT1A-212ENST00000460677 SVIPQ8NHG7 77 aa6.23□□□□□ -1.41
PCYT1A-212ENST00000460677 PP632Q6XCG6 107 aa6.22□□□□□ -1.41
PCYT1A-212ENST00000460677 CRCT1Q9UGL9 99 aa6.21□□□□□ -1.41
PCYT1A-212ENST00000460677 KRTAP9-6A0A140TA67 174 aa6.18□□□□□ -1.42
PCYT1A-212ENST00000460677 LCE3AQ5TA76 89 aa6.17□□□□□ -1.42
PCYT1A-212ENST00000460677 FCGBPQ9Y6R7 5405 aaPredicted RBP6.13□□□□□ -1.43
PCYT1A-212ENST00000460677 KRTAP4-8A0A0G2JLE6 195 aa6.06□□□□□ -1.44
PCYT1A-212ENST00000460677 KRTAP4-8Q9BYQ9 185 aa6.06□□□□□ -1.44
PCYT1A-212ENST00000460677 KRTAP8-1Q8IUC2 63 aa6.05□□□□□ -1.44
PCYT1A-212ENST00000460677 KMT2DO14686 5537 aa5.94□□□□□ -1.46
PCYT1A-212ENST00000460677 KRTAP12-3P60328 96 aa5.93□□□□□ -1.46
PCYT1A-212ENST00000460677 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.93□□□□□ -1.46
PCYT1A-212ENST00000460677 KRTAP19-5Q3LI72 72 aa5.93□□□□□ -1.46
PCYT1A-212ENST00000460677 KRTAP19-7Q3SYF9 63 aa5.87□□□□□ -1.47
PCYT1A-212ENST00000460677 KRTAP15-1Q3LI76 137 aa5.8□□□□□ -1.48
PCYT1A-212ENST00000460677 MT1EP04732 61 aa5.77□□□□□ -1.49
PCYT1A-212ENST00000460677 LCE3BQ5TA77 95 aa5.77□□□□□ -1.49
PCYT1A-212ENST00000460677 KRTAP4-12Q9BQ66 201 aa5.76□□□□□ -1.49
PCYT1A-212ENST00000460677 MACF1Q9UPN3 7388 aaKnown RBP5.76□□□□□ -1.49
PCYT1A-212ENST00000460677 SPRR2FQ96RM1 72 aa5.7□□□□□ -1.5
PCYT1A-212ENST00000460677 KRTAP5-9P26371 169 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms