RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 PRR15LQ9BU68 103 aa9.1□□□□□ -0.95
CDK11A-209ENST00000460465 LPAP08519 4548 aa9.08□□□□□ -0.96
CDK11A-209ENST00000460465 ACYP2P14621 99 aa9.06□□□□□ -0.96
CDK11A-209ENST00000460465 SPTSSBQ8NFR3 76 aa9.05□□□□□ -0.96
CDK11A-209ENST00000460465 PCLOQ9Y6V0 5065 aa9.04□□□□□ -0.96
CDK11A-209ENST00000460465 LRP2P98164 4655 aa9.01□□□□□ -0.97
CDK11A-209ENST00000460465 CDC42SE1Q9NRR8 79 aa8.99□□□□□ -0.97
CDK11A-209ENST00000460465 A6NED7 52 aa8.97□□□□□ -0.97
CDK11A-209ENST00000460465 KRTAP3-1Q9BYR8 98 aa8.96□□□□□ -0.98
CDK11A-209ENST00000460465 COX6B2Q6YFQ2 88 aa8.93□□□□□ -0.98
CDK11A-209ENST00000460465 SEC61BP60468 96 aaKnown RBP8.92□□□□□ -0.98
CDK11A-209ENST00000460465 LINC01558Q9Y6Z2 57 aa8.91□□□□□ -0.98
CDK11A-209ENST00000460465 LINC01554Q52M75 96 aa8.88□□□□□ -0.99
CDK11A-209ENST00000460465 HERC1Q15751 4861 aa8.82□□□□□ -1
CDK11A-209ENST00000460465 KRTAP4-1Q9BYQ7 146 aa8.77□□□□□ -1
CDK11A-209ENST00000460465 HMCN2Q8NDA2 5059 aa8.75□□□□□ -1.01
CDK11A-209ENST00000460465 MUC17Q685J3 4493 aa8.74□□□□□ -1.01
CDK11A-209ENST00000460465 H1FX-AS1Q4G0G2 97 aa8.69□□□□□ -1.02
CDK11A-209ENST00000460465 S4R3F8 94 aa8.66□□□□□ -1.02
CDK11A-209ENST00000460465 PRAC1Q96KF2 57 aa8.64□□□□□ -1.03
CDK11A-209ENST00000460465 KRTAP3-3Q9BYR6 98 aa8.63□□□□□ -1.03
CDK11A-209ENST00000460465 A0A1B0GU69 56 aa8.6□□□□□ -1.03
CDK11A-209ENST00000460465 KRTAP19-2Q3LHN2 52 aa8.53□□□□□ -1.04
CDK11A-209ENST00000460465 ADM2Q7Z4H4 148 aa8.52□□□□□ -1.05
CDK11A-209ENST00000460465 SPATA8Q6RVD6 105 aa8.47□□□□□ -1.05
CDK11A-209ENST00000460465 CSAG1Q6PB30 78 aa8.44□□□□□ -1.06
CDK11A-209ENST00000460465 MUC2Q02817 5179 aa8.44□□□□□ -1.06
CDK11A-209ENST00000460465 MIR22HGQ0VDD5 57 aa8.42□□□□□ -1.06
CDK11A-209ENST00000460465 UQCR11O14957 56 aa8.41□□□□□ -1.06
CDK11A-209ENST00000460465 KRTAP3-2Q9BYR7 98 aa8.34□□□□□ -1.07
CDK11A-209ENST00000460465 KRTAP10-6P60371 365 aaPredicted RBP8.33□□□□□ -1.08
CDK11A-209ENST00000460465 UBR4Q5T4S7 5183 aa8.33□□□□□ -1.08
CDK11A-209ENST00000460465 A0A1B0GU33 70 aa8.31□□□□□ -1.08
CDK11A-209ENST00000460465 RNF213Q63HN8 5207 aa8.3□□□□□ -1.08
CDK11A-209ENST00000460465 LCE2CQ5TA81 110 aa8.3□□□□□ -1.08
CDK11A-209ENST00000460465 P0C880 135 aa8.28□□□□□ -1.08
CDK11A-209ENST00000460465 ROMO1P60602 79 aa8.25□□□□□ -1.09
CDK11A-209ENST00000460465 H0YAA0 97 aa8.25□□□□□ -1.09
CDK11A-209ENST00000460465 FLGP20930 4061 aaPredicted RBP8.23□□□□□ -1.09
CDK11A-209ENST00000460465 KRTAP13-4Q3LI77 160 aa8.14□□□□□ -1.11
CDK11A-209ENST00000460465 MT1HP80294 61 aa8.13□□□□□ -1.11
CDK11A-209ENST00000460465 FAT4Q6V0I7 4981 aa8.09□□□□□ -1.11
CDK11A-209ENST00000460465 KRTAP25-1Q3LHN0 102 aa8.08□□□□□ -1.12
CDK11A-209ENST00000460465 M0R2T5 61 aa8.07□□□□□ -1.12
CDK11A-209ENST00000460465 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
CDK11A-209ENST00000460465 M0QZ58 72 aa8.02□□□□□ -1.13
CDK11A-209ENST00000460465 A0A0D9SG42 100 aa8□□□□□ -1.13
CDK11A-209ENST00000460465 R4GN34 69 aa7.98□□□□□ -1.13
CDK11A-209ENST00000460465 LUZP6Q538Z0 58 aa7.86□□□□□ -1.15
CDK11A-209ENST00000460465 K7ERS5 55 aa7.85□□□□□ -1.15
CDK11A-209ENST00000460465 CRIPTQ9P021 101 aa7.85□□□□□ -1.15
CDK11A-209ENST00000460465 KRTAP9-8Q9BYQ0 159 aa7.84□□□□□ -1.15
CDK11A-209ENST00000460465 MT2AP02795 61 aa7.83□□□□□ -1.16
CDK11A-209ENST00000460465 KRTAP12-1P59990 96 aa7.82□□□□□ -1.16
CDK11A-209ENST00000460465 KRTAP12-2P59991 146 aa7.81□□□□□ -1.16
CDK11A-209ENST00000460465 MT1FP04733 61 aa7.8□□□□□ -1.16
CDK11A-209ENST00000460465 SPINT4Q6UDR6 99 aa7.8□□□□□ -1.16
CDK11A-209ENST00000460465 KRTAP10-10P60014 251 aa7.77□□□□□ -1.17
CDK11A-209ENST00000460465 NDUFAF8A1L188 74 aa7.73□□□□□ -1.17
CDK11A-209ENST00000460465 LCE2AQ5TA79 106 aaPredicted RBP7.73□□□□□ -1.17
CDK11A-209ENST00000460465 SPRR2GQ9BYE4 73 aa7.69□□□□□ -1.18
CDK11A-209ENST00000460465 KRTAP19-1Q8IUB9 90 aa7.68□□□□□ -1.18
CDK11A-209ENST00000460465 KRTAP15-1Q3LI76 137 aa7.56□□□□□ -1.2
CDK11A-209ENST00000460465 KRTAP9-3Q9BYQ3 159 aa7.55□□□□□ -1.2
CDK11A-209ENST00000460465 CAMK2N1Q7Z7J9 78 aa7.49□□□□□ -1.21
CDK11A-209ENST00000460465 KRTAP19-8Q3LI54 63 aa7.48□□□□□ -1.21
CDK11A-209ENST00000460465 C10orf95Q9H7T3 257 aa7.47□□□□□ -1.21
CDK11A-209ENST00000460465 PLAC4Q8WY50 150 aa7.46□□□□□ -1.21
CDK11A-209ENST00000460465 MT1BP07438 61 aa7.4□□□□□ -1.23
CDK11A-209ENST00000460465 LCE2BO14633 110 aa7.34□□□□□ -1.23
CDK11A-209ENST00000460465 MT1XP80297 61 aa7.17□□□□□ -1.26
CDK11A-209ENST00000460465 KRTAP10-5P60370 271 aa7.17□□□□□ -1.26
CDK11A-209ENST00000460465 TNP1P09430 55 aa7.13□□□□□ -1.27
CDK11A-209ENST00000460465 USH2AO75445 5202 aa7.06□□□□□ -1.28
CDK11A-209ENST00000460465 PRO2289Q9P1D8 64 aa7.05□□□□□ -1.28
CDK11A-209ENST00000460465 LCE2DQ5TA82 110 aaPredicted RBP6.98□□□□□ -1.29
CDK11A-209ENST00000460465 PP632Q6XCG6 107 aa6.94□□□□□ -1.3
CDK11A-209ENST00000460465 KRTAP10-7P60409 375 aaPredicted RBP6.9□□□□□ -1.3
CDK11A-209ENST00000460465 KRTAP23-1A1A580 65 aa6.9□□□□□ -1.31
CDK11A-209ENST00000460465 SSPOA2VEC9 5147 aa6.85□□□□□ -1.31
CDK11A-209ENST00000460465 LCE3AQ5TA76 89 aa6.85□□□□□ -1.31
CDK11A-209ENST00000460465 KRTAP19-6Q3LI70 58 aa6.84□□□□□ -1.31
CDK11A-209ENST00000460465 KRTAP10-12P60413 245 aa6.83□□□□□ -1.32
CDK11A-209ENST00000460465 FSIP2Q5CZC0 6907 aa6.75□□□□□ -1.33
CDK11A-209ENST00000460465 KRTAP9-2Q9BYQ4 174 aa6.68□□□□□ -1.34
CDK11A-209ENST00000460465 KRTAP8-1Q8IUC2 63 aa6.67□□□□□ -1.34
CDK11A-209ENST00000460465 KRTAP4-8A0A0G2JLE6 195 aa6.62□□□□□ -1.35
CDK11A-209ENST00000460465 KRTAP4-8Q9BYQ9 185 aa6.62□□□□□ -1.35
CDK11A-209ENST00000460465 KRTAP12-3P60328 96 aa6.55□□□□□ -1.36
CDK11A-209ENST00000460465 KMT2DO14686 5537 aa6.54□□□□□ -1.36
CDK11A-209ENST00000460465 FCGBPQ9Y6R7 5405 aaPredicted RBP6.52□□□□□ -1.37
CDK11A-209ENST00000460465 KRTAP19-5Q3LI72 72 aa6.51□□□□□ -1.37
CDK11A-209ENST00000460465 CRCT1Q9UGL9 99 aa6.45□□□□□ -1.38
CDK11A-209ENST00000460465 KRTAP19-7Q3SYF9 63 aa6.4□□□□□ -1.38
CDK11A-209ENST00000460465 SPRR5A0A1B0GTR4 108 aa6.33□□□□□ -1.4
CDK11A-209ENST00000460465 INE1O15225 51 aa6.3□□□□□ -1.4
CDK11A-209ENST00000460465 MT1EP04732 61 aa6.27□□□□□ -1.41
CDK11A-209ENST00000460465 MACF1Q9UPN3 7388 aaKnown RBP6.21□□□□□ -1.42
CDK11A-209ENST00000460465 MT1LQ93083 61 aa6.16□□□□□ -1.42
CDK11A-209ENST00000460465 KRTAP9-6A0A140TA67 174 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms