RNA–Protein interactions for RNA: ENST00000460177.1

LCNL1-203, Transcript of lipocalin like 1, humanhuman

TSL 1 (best)

Gene LCNL1, Length 1,704 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-203ENST00000460177 SPTSSBQ8NFR3 76 aa11.12□□□□□ -0.63
LCNL1-203ENST00000460177 LINC01558Q9Y6Z2 57 aa11.12□□□□□ -0.63
LCNL1-203ENST00000460177 S4R3F8 94 aa11.12□□□□□ -0.63
LCNL1-203ENST00000460177 MUC2Q02817 5179 aa11.12□□□□□ -0.63
LCNL1-203ENST00000460177 LCA10Q71F78 164 aa11.1□□□□□ -0.63
LCNL1-203ENST00000460177 KRTAP3-3Q9BYR6 98 aa11.07□□□□□ -0.64
LCNL1-203ENST00000460177 KRTAP19-2Q3LHN2 52 aa11.06□□□□□ -0.64
LCNL1-203ENST00000460177 RNF213Q63HN8 5207 aa11.06□□□□□ -0.64
LCNL1-203ENST00000460177 PSPHP1O15172 72 aa11.03□□□□□ -0.64
LCNL1-203ENST00000460177 PRR15LQ9BU68 103 aa11.03□□□□□ -0.64
LCNL1-203ENST00000460177 Q5VV11 94 aa10.95□□□□□ -0.66
LCNL1-203ENST00000460177 A0A1B0GU69 56 aa10.92□□□□□ -0.66
LCNL1-203ENST00000460177 CSAG1Q6PB30 78 aa10.83□□□□□ -0.68
LCNL1-203ENST00000460177 SEC61GP60059 68 aa10.81□□□□□ -0.68
LCNL1-203ENST00000460177 FLGP20930 4061 aaPredicted RBP10.8□□□□□ -0.68
LCNL1-203ENST00000460177 LCE2CQ5TA81 110 aa10.78□□□□□ -0.68
LCNL1-203ENST00000460177 KRTAP3-2Q9BYR7 98 aa10.69□□□□□ -0.7
LCNL1-203ENST00000460177 A6NED7 52 aa10.68□□□□□ -0.7
LCNL1-203ENST00000460177 KRTAP10-6P60371 365 aaPredicted RBP10.67□□□□□ -0.7
LCNL1-203ENST00000460177 FAT4Q6V0I7 4981 aa10.64□□□□□ -0.71
LCNL1-203ENST00000460177 ADM2Q7Z4H4 148 aa10.63□□□□□ -0.71
LCNL1-203ENST00000460177 H0YAA0 97 aa10.62□□□□□ -0.71
LCNL1-203ENST00000460177 P0C880 135 aa10.59□□□□□ -0.71
LCNL1-203ENST00000460177 BRK1Q8WUW1 75 aa10.59□□□□□ -0.71
LCNL1-203ENST00000460177 UQCR11O14957 56 aa10.58□□□□□ -0.72
LCNL1-203ENST00000460177 A0A1B0GU33 70 aa10.58□□□□□ -0.72
LCNL1-203ENST00000460177 MT1HP80294 61 aa10.55□□□□□ -0.72
LCNL1-203ENST00000460177 A8MU10 97 aa10.51□□□□□ -0.73
LCNL1-203ENST00000460177 CDC42SE1Q9NRR8 79 aa10.5□□□□□ -0.73
LCNL1-203ENST00000460177 MIR22HGQ0VDD5 57 aa10.48□□□□□ -0.73
LCNL1-203ENST00000460177 SPATA8Q6RVD6 105 aa10.47□□□□□ -0.73
LCNL1-203ENST00000460177 M0R2T5 61 aa10.41□□□□□ -0.74
LCNL1-203ENST00000460177 KRTAP13-4Q3LI77 160 aa10.41□□□□□ -0.74
LCNL1-203ENST00000460177 PRO0628Q9UI54 55 aa10.36□□□□□ -0.75
LCNL1-203ENST00000460177 LCE2AQ5TA79 106 aaPredicted RBP10.34□□□□□ -0.75
LCNL1-203ENST00000460177 LORP23490 312 aaPredicted RBP10.3□□□□□ -0.76
LCNL1-203ENST00000460177 M0QZ58 72 aa10.27□□□□□ -0.76
LCNL1-203ENST00000460177 R4GN34 69 aa10.22□□□□□ -0.77
LCNL1-203ENST00000460177 A0A0D9SG42 100 aa10.19□□□□□ -0.78
LCNL1-203ENST00000460177 KRTAP9-8Q9BYQ0 159 aa10.16□□□□□ -0.78
LCNL1-203ENST00000460177 MT2AP02795 61 aa10.15□□□□□ -0.78
LCNL1-203ENST00000460177 CRIPTQ9P021 101 aa10.12□□□□□ -0.79
LCNL1-203ENST00000460177 MT1FP04733 61 aa10.1□□□□□ -0.79
LCNL1-203ENST00000460177 LINC01554Q52M75 96 aa10.05□□□□□ -0.8
LCNL1-203ENST00000460177 KRTAP10-10P60014 251 aa10.03□□□□□ -0.8
LCNL1-203ENST00000460177 KRTAP12-1P59990 96 aa9.99□□□□□ -0.81
LCNL1-203ENST00000460177 A6NN06 94 aa9.98□□□□□ -0.81
LCNL1-203ENST00000460177 PMAIP1Q13794 54 aa9.98□□□□□ -0.81
LCNL1-203ENST00000460177 KRTAP12-2P59991 146 aa9.97□□□□□ -0.81
LCNL1-203ENST00000460177 K7ERS5 55 aa9.96□□□□□ -0.81
LCNL1-203ENST00000460177 SPRR2GQ9BYE4 73 aa9.94□□□□□ -0.82
LCNL1-203ENST00000460177 SPINT4Q6UDR6 99 aa9.93□□□□□ -0.82
LCNL1-203ENST00000460177 KRTAP19-1Q8IUB9 90 aa9.93□□□□□ -0.82
LCNL1-203ENST00000460177 KRTAP9-3Q9BYQ3 159 aa9.79□□□□□ -0.84
LCNL1-203ENST00000460177 KRTAP19-8Q3LI54 63 aa9.69□□□□□ -0.86
LCNL1-203ENST00000460177 KTN1-AS1Q86SY8 53 aa9.61□□□□□ -0.87
LCNL1-203ENST00000460177 ROMO1P60602 79 aa9.59□□□□□ -0.87
LCNL1-203ENST00000460177 PLAC4Q8WY50 150 aa9.58□□□□□ -0.88
LCNL1-203ENST00000460177 MT1BP07438 61 aa9.57□□□□□ -0.88
LCNL1-203ENST00000460177 CAMK2N1Q7Z7J9 78 aa9.57□□□□□ -0.88
LCNL1-203ENST00000460177 LCE2BO14633 110 aa9.52□□□□□ -0.89
LCNL1-203ENST00000460177 SVIPQ8NHG7 77 aa9.52□□□□□ -0.89
LCNL1-203ENST00000460177 LCE2DQ5TA82 110 aaPredicted RBP9.48□□□□□ -0.89
LCNL1-203ENST00000460177 C10orf95Q9H7T3 257 aa9.46□□□□□ -0.89
LCNL1-203ENST00000460177 PRAC1Q96KF2 57 aa9.41□□□□□ -0.9
LCNL1-203ENST00000460177 KRTAP9-2Q9BYQ4 174 aa9.37□□□□□ -0.91
LCNL1-203ENST00000460177 USH2AO75445 5202 aa9.35□□□□□ -0.91
LCNL1-203ENST00000460177 FSIP2Q5CZC0 6907 aa9.31□□□□□ -0.92
LCNL1-203ENST00000460177 MT1XP80297 61 aa9.27□□□□□ -0.93
LCNL1-203ENST00000460177 KRTAP10-5P60370 271 aa9.24□□□□□ -0.93
LCNL1-203ENST00000460177 KRTAP25-1Q3LHN0 102 aa9.18□□□□□ -0.94
LCNL1-203ENST00000460177 SSPOA2VEC9 5147 aa9.12□□□□□ -0.95
LCNL1-203ENST00000460177 TNP1P09430 55 aa9.11□□□□□ -0.95
LCNL1-203ENST00000460177 PRO2289Q9P1D8 64 aa9.1□□□□□ -0.95
LCNL1-203ENST00000460177 KRTAP19-6Q3LI70 58 aa8.97□□□□□ -0.97
LCNL1-203ENST00000460177 CRCT1Q9UGL9 99 aa8.96□□□□□ -0.98
LCNL1-203ENST00000460177 KRTAP10-7P60409 375 aaPredicted RBP8.9□□□□□ -0.98
LCNL1-203ENST00000460177 PP632Q6XCG6 107 aa8.85□□□□□ -0.99
LCNL1-203ENST00000460177 KRTAP23-1A1A580 65 aa8.84□□□□□ -0.99
LCNL1-203ENST00000460177 KRTAP10-12P60413 245 aa8.8□□□□□ -1
LCNL1-203ENST00000460177 LCE3AQ5TA76 89 aa8.78□□□□□ -1
LCNL1-203ENST00000460177 FCGBPQ9Y6R7 5405 aaPredicted RBP8.78□□□□□ -1
LCNL1-203ENST00000460177 KRTAP9-6A0A140TA67 174 aa8.76□□□□□ -1.01
LCNL1-203ENST00000460177 KRTAP8-1Q8IUC2 63 aa8.57□□□□□ -1.04
LCNL1-203ENST00000460177 KRTAP4-8A0A0G2JLE6 195 aa8.53□□□□□ -1.04
LCNL1-203ENST00000460177 KRTAP4-8Q9BYQ9 185 aa8.53□□□□□ -1.04
LCNL1-203ENST00000460177 KMT2DO14686 5537 aa8.49□□□□□ -1.05
LCNL1-203ENST00000460177 MACF1Q9UPN3 7388 aaKnown RBP8.43□□□□□ -1.06
LCNL1-203ENST00000460177 KRTAP12-3P60328 96 aa8.4□□□□□ -1.07
LCNL1-203ENST00000460177 KRTAP19-5Q3LI72 72 aa8.37□□□□□ -1.07
LCNL1-203ENST00000460177 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.32□□□□□ -1.08
LCNL1-203ENST00000460177 SYNE2Q8WXH0 6885 aaKnown RBP8.29□□□□□ -1.08
LCNL1-203ENST00000460177 KRTAP19-7Q3SYF9 63 aa8.26□□□□□ -1.09
LCNL1-203ENST00000460177 KRTAP15-1Q3LI76 137 aa8.23□□□□□ -1.09
LCNL1-203ENST00000460177 MT1EP04732 61 aa8.12□□□□□ -1.11
LCNL1-203ENST00000460177 KRTAP6-3Q3LI67 103 aa7.98□□□□□ -1.13
LCNL1-203ENST00000460177 KRTAP9-7A8MTY7 169 aa7.98□□□□□ -1.13
LCNL1-203ENST00000460177 SPRR2FQ96RM1 72 aa7.97□□□□□ -1.13
LCNL1-203ENST00000460177 KRTAP5-9P26371 169 aa7.96□□□□□ -1.14
LCNL1-203ENST00000460177 MT1LQ93083 61 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms