RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 RETNLBQ9BQ08 111 aa8.83□□□□□ -1
CMTM3-203ENST00000460097 ADM2Q7Z4H4 148 aa8.82□□□□□ -1
CMTM3-203ENST00000460097 LINC00304Q8N9R0 145 aa8.73□□□□□ -1.01
CMTM3-203ENST00000460097 C4orf48Q5BLP8 95 aa8.71□□□□□ -1.02
CMTM3-203ENST00000460097 HMCN2Q8NDA2 5059 aa8.69□□□□□ -1.02
CMTM3-203ENST00000460097 CSAG1Q6PB30 78 aa8.66□□□□□ -1.02
CMTM3-203ENST00000460097 SPINK1P00995 79 aa8.63□□□□□ -1.03
CMTM3-203ENST00000460097 A8MUU9 505 aa8.58□□□□□ -1.04
CMTM3-203ENST00000460097 RPS29P62273 56 aaKnown RBP8.58□□□□□ -1.04
CMTM3-203ENST00000460097 H0YAA0 97 aa8.52□□□□□ -1.05
CMTM3-203ENST00000460097 LRP2P98164 4655 aa8.5□□□□□ -1.05
CMTM3-203ENST00000460097 KRTAP25-1Q3LHN0 102 aa8.5□□□□□ -1.05
CMTM3-203ENST00000460097 LPAP08519 4548 aa8.48□□□□□ -1.05
CMTM3-203ENST00000460097 A0A1B0GU33 70 aa8.47□□□□□ -1.05
CMTM3-203ENST00000460097 H1FX-AS1Q4G0G2 97 aa8.45□□□□□ -1.06
CMTM3-203ENST00000460097 H3BS24 57 aa8.44□□□□□ -1.06
CMTM3-203ENST00000460097 C20orf166-AS1Q96NR2 134 aa8.42□□□□□ -1.06
CMTM3-203ENST00000460097 UBR4Q5T4S7 5183 aa8.42□□□□□ -1.06
CMTM3-203ENST00000460097 TPRXLQ17RH7 258 aa8.39□□□□□ -1.07
CMTM3-203ENST00000460097 K7ERS5 55 aa8.35□□□□□ -1.07
CMTM3-203ENST00000460097 KRTAP3-1Q9BYR8 98 aa8.35□□□□□ -1.07
CMTM3-203ENST00000460097 ROMO1P60602 79 aa8.35□□□□□ -1.07
CMTM3-203ENST00000460097 C9orf92A6NGG3 77 aa8.24□□□□□ -1.09
CMTM3-203ENST00000460097 COX6B2Q6YFQ2 88 aa8.24□□□□□ -1.09
CMTM3-203ENST00000460097 RNF213Q63HN8 5207 aa8.23□□□□□ -1.09
CMTM3-203ENST00000460097 XP32Q5T750 250 aa8.2□□□□□ -1.1
CMTM3-203ENST00000460097 MUC17Q685J3 4493 aa8.17□□□□□ -1.1
CMTM3-203ENST00000460097 SEC61BP60468 96 aaKnown RBP8.14□□□□□ -1.11
CMTM3-203ENST00000460097 RPL37P61927 97 aaKnown RBP8.13□□□□□ -1.11
CMTM3-203ENST00000460097 MUC2Q02817 5179 aa8.13□□□□□ -1.11
CMTM3-203ENST00000460097 KRTAP10-6P60371 365 aaPredicted RBP8.07□□□□□ -1.12
CMTM3-203ENST00000460097 P0C880 135 aa8.02□□□□□ -1.13
CMTM3-203ENST00000460097 KRTAP3-3Q9BYR6 98 aa8□□□□□ -1.13
CMTM3-203ENST00000460097 KRTAP3-2Q9BYR7 98 aa7.99□□□□□ -1.13
CMTM3-203ENST00000460097 KRTAP4-1Q9BYQ7 146 aa7.97□□□□□ -1.13
CMTM3-203ENST00000460097 CRIPTQ9P021 101 aa7.96□□□□□ -1.14
CMTM3-203ENST00000460097 KRTAP13-4Q3LI77 160 aa7.94□□□□□ -1.14
CMTM3-203ENST00000460097 FAT4Q6V0I7 4981 aa7.88□□□□□ -1.15
CMTM3-203ENST00000460097 S4R3F8 94 aa7.87□□□□□ -1.15
CMTM3-203ENST00000460097 SPINT4Q6UDR6 99 aa7.87□□□□□ -1.15
CMTM3-203ENST00000460097 KRTAP15-1Q3LI76 137 aa7.84□□□□□ -1.15
CMTM3-203ENST00000460097 A0A0D9SG42 100 aa7.82□□□□□ -1.16
CMTM3-203ENST00000460097 KRTAP12-2P59991 146 aa7.73□□□□□ -1.17
CMTM3-203ENST00000460097 KRTAP19-2Q3LHN2 52 aa7.73□□□□□ -1.17
CMTM3-203ENST00000460097 KRTAP12-1P59990 96 aa7.72□□□□□ -1.17
CMTM3-203ENST00000460097 M0QZ58 72 aa7.71□□□□□ -1.17
CMTM3-203ENST00000460097 C10orf95Q9H7T3 257 aa7.71□□□□□ -1.17
CMTM3-203ENST00000460097 LCE2CQ5TA81 110 aa7.7□□□□□ -1.18
CMTM3-203ENST00000460097 LCE2AQ5TA79 106 aaPredicted RBP7.69□□□□□ -1.18
CMTM3-203ENST00000460097 NDUFAF8A1L188 74 aa7.63□□□□□ -1.19
CMTM3-203ENST00000460097 MT1HP80294 61 aa7.59□□□□□ -1.19
CMTM3-203ENST00000460097 FLGP20930 4061 aaPredicted RBP7.57□□□□□ -1.2
CMTM3-203ENST00000460097 M0R2T5 61 aa7.51□□□□□ -1.21
CMTM3-203ENST00000460097 A0A0A0MQY5 61 aa7.39□□□□□ -1.23
CMTM3-203ENST00000460097 LORP23490 312 aaPredicted RBP7.38□□□□□ -1.23
CMTM3-203ENST00000460097 PLAC4Q8WY50 150 aa7.31□□□□□ -1.24
CMTM3-203ENST00000460097 R4GN34 69 aa7.29□□□□□ -1.24
CMTM3-203ENST00000460097 PP632Q6XCG6 107 aa7.28□□□□□ -1.24
CMTM3-203ENST00000460097 KRTAP9-8Q9BYQ0 159 aa7.24□□□□□ -1.25
CMTM3-203ENST00000460097 KRTAP9-2Q9BYQ4 174 aa7.21□□□□□ -1.25
CMTM3-203ENST00000460097 LCE2DQ5TA82 110 aaPredicted RBP7.19□□□□□ -1.26
CMTM3-203ENST00000460097 MT2AP02795 61 aa7.15□□□□□ -1.26
CMTM3-203ENST00000460097 KRTAP10-10P60014 251 aa7.11□□□□□ -1.27
CMTM3-203ENST00000460097 MT1FP04733 61 aa7.1□□□□□ -1.27
CMTM3-203ENST00000460097 LUZP6Q538Z0 58 aa7.08□□□□□ -1.28
CMTM3-203ENST00000460097 KRTAP23-1A1A580 65 aa7.05□□□□□ -1.28
CMTM3-203ENST00000460097 FSIP2Q5CZC0 6907 aa7□□□□□ -1.29
CMTM3-203ENST00000460097 KRTAP9-3Q9BYQ3 159 aa7□□□□□ -1.29
CMTM3-203ENST00000460097 CAMK2N1Q7Z7J9 78 aa6.94□□□□□ -1.3
CMTM3-203ENST00000460097 USH2AO75445 5202 aa6.9□□□□□ -1.3
CMTM3-203ENST00000460097 SPRR5A0A1B0GTR4 108 aa6.9□□□□□ -1.31
CMTM3-203ENST00000460097 LCE2BO14633 110 aa6.9□□□□□ -1.31
CMTM3-203ENST00000460097 CRCT1Q9UGL9 99 aa6.88□□□□□ -1.31
CMTM3-203ENST00000460097 KRTAP9-6A0A140TA67 174 aa6.86□□□□□ -1.31
CMTM3-203ENST00000460097 TNP1P09430 55 aa6.82□□□□□ -1.32
CMTM3-203ENST00000460097 KRTAP19-1Q8IUB9 90 aa6.78□□□□□ -1.32
CMTM3-203ENST00000460097 SSPOA2VEC9 5147 aa6.78□□□□□ -1.32
CMTM3-203ENST00000460097 SPRR2GQ9BYE4 73 aa6.74□□□□□ -1.33
CMTM3-203ENST00000460097 KRTAP19-8Q3LI54 63 aa6.64□□□□□ -1.35
CMTM3-203ENST00000460097 KRTAP19-6Q3LI70 58 aa6.6□□□□□ -1.35
CMTM3-203ENST00000460097 MT1BP07438 61 aa6.59□□□□□ -1.35
CMTM3-203ENST00000460097 FCGBPQ9Y6R7 5405 aaPredicted RBP6.59□□□□□ -1.36
CMTM3-203ENST00000460097 PRO2289Q9P1D8 64 aa6.42□□□□□ -1.38
CMTM3-203ENST00000460097 KRTAP10-5P60370 271 aa6.39□□□□□ -1.39
CMTM3-203ENST00000460097 INE1O15225 51 aa6.39□□□□□ -1.39
CMTM3-203ENST00000460097 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.37□□□□□ -1.39
CMTM3-203ENST00000460097 MACF1Q9UPN3 7388 aaKnown RBP6.35□□□□□ -1.39
CMTM3-203ENST00000460097 KRTAP8-1Q8IUC2 63 aa6.33□□□□□ -1.4
CMTM3-203ENST00000460097 LCE3AQ5TA76 89 aa6.32□□□□□ -1.4
CMTM3-203ENST00000460097 MT1XP80297 61 aa6.26□□□□□ -1.41
CMTM3-203ENST00000460097 SYNE2Q8WXH0 6885 aaKnown RBP6.23□□□□□ -1.41
CMTM3-203ENST00000460097 KRTAP9-7A8MTY7 169 aa6.21□□□□□ -1.42
CMTM3-203ENST00000460097 KRTAP6-3Q3LI67 103 aa6.07□□□□□ -1.44
CMTM3-203ENST00000460097 KRTAP12-3P60328 96 aa6.06□□□□□ -1.44
CMTM3-203ENST00000460097 KMT2DO14686 5537 aa6.05□□□□□ -1.44
CMTM3-203ENST00000460097 KRTAP10-12P60413 245 aa6.01□□□□□ -1.45
CMTM3-203ENST00000460097 KRTAP10-7P60409 375 aaPredicted RBP5.99□□□□□ -1.45
CMTM3-203ENST00000460097 MUC12Q9UKN1 5478 aa5.92□□□□□ -1.46
CMTM3-203ENST00000460097 KRTAP5-9P26371 169 aa5.92□□□□□ -1.46
CMTM3-203ENST00000460097 KRTAP4-8A0A0G2JLE6 195 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms