RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 DMAC1Q96GE9 116 aa3.05□□□□□ -1.92
RNU1-88P-201ENST00000459274 CYSTM1Q9H1C7 97 aa3.05□□□□□ -1.92
RNU1-88P-201ENST00000459274 DNAH8Q96JB1 4490 aa3.05□□□□□ -1.92
RNU1-88P-201ENST00000459274 V9GYY9 64 aa3.04□□□□□ -1.92
RNU1-88P-201ENST00000459274 KIAA1109Q2LD37 5005 aa3.04□□□□□ -1.92
RNU1-88P-201ENST00000459274 RYR3Q15413 4870 aa3.04□□□□□ -1.92
RNU1-88P-201ENST00000459274 COA5Q86WW8 74 aa3.03□□□□□ -1.92
RNU1-88P-201ENST00000459274 DYNC1H1Q14204 4646 aaKnown RBP3.03□□□□□ -1.92
RNU1-88P-201ENST00000459274 SMIM26A0A096LP01 95 aa3.02□□□□□ -1.93
RNU1-88P-201ENST00000459274 H1FX-AS1Q4G0G2 97 aa3.02□□□□□ -1.93
RNU1-88P-201ENST00000459274 PRR15LQ9BU68 103 aa3.02□□□□□ -1.93
RNU1-88P-201ENST00000459274 S4R3F8 94 aa3.01□□□□□ -1.93
RNU1-88P-201ENST00000459274 APOBP04114 4563 aaKnown RBP3□□□□□ -1.93
RNU1-88P-201ENST00000459274 HSPG2P98160 4391 aa2.99□□□□□ -1.93
RNU1-88P-201ENST00000459274 RYR1P21817 5038 aa2.99□□□□□ -1.93
RNU1-88P-201ENST00000459274 CSAG1Q6PB30 78 aa2.98□□□□□ -1.93
RNU1-88P-201ENST00000459274 EPPK1P58107 5090 aaKnown RBP2.98□□□□□ -1.93
RNU1-88P-201ENST00000459274 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
RNU1-88P-201ENST00000459274 KRTAP5-4Q6L8H1 288 aa2.97□□□□□ -1.93
RNU1-88P-201ENST00000459274 A0A1B0GU69 56 aa2.96□□□□□ -1.94
RNU1-88P-201ENST00000459274 MPLKIPQ8TAP9 179 aa2.96□□□□□ -1.94
RNU1-88P-201ENST00000459274 M0R2T5 61 aa2.94□□□□□ -1.94
RNU1-88P-201ENST00000459274 PKHD1L1Q86WI1 4243 aa2.94□□□□□ -1.94
RNU1-88P-201ENST00000459274 FAT1Q14517 4588 aa2.93□□□□□ -1.94
RNU1-88P-201ENST00000459274 Q1T7F1 81 aa2.92□□□□□ -1.94
RNU1-88P-201ENST00000459274 LCA10Q71F78 164 aa2.92□□□□□ -1.94
RNU1-88P-201ENST00000459274 BIRC6Q9NR09 4857 aa2.92□□□□□ -1.94
RNU1-88P-201ENST00000459274 KRTAP3-1Q9BYR8 98 aa2.91□□□□□ -1.94
RNU1-88P-201ENST00000459274 KRTAP5-1Q6L8H4 278 aa2.9□□□□□ -1.95
RNU1-88P-201ENST00000459274 LINC01558Q9Y6Z2 57 aa2.9□□□□□ -1.95
RNU1-88P-201ENST00000459274 LRP1Q07954 4544 aaKnown RBP2.89□□□□□ -1.95
RNU1-88P-201ENST00000459274 PSPHP1O15172 72 aa2.89□□□□□ -1.95
RNU1-88P-201ENST00000459274 KRTAP4-1Q9BYQ7 146 aa2.88□□□□□ -1.95
RNU1-88P-201ENST00000459274 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
RNU1-88P-201ENST00000459274 A6NED7 52 aa2.87□□□□□ -1.95
RNU1-88P-201ENST00000459274 UQCR11O14957 56 aa2.87□□□□□ -1.95
RNU1-88P-201ENST00000459274 TNXBP22105 4242 aa2.85□□□□□ -1.95
RNU1-88P-201ENST00000459274 A0A1B0GU33 70 aa2.85□□□□□ -1.95
RNU1-88P-201ENST00000459274 ADM2Q7Z4H4 148 aa2.85□□□□□ -1.95
RNU1-88P-201ENST00000459274 MYCBP2O75592 4640 aa2.84□□□□□ -1.95
RNU1-88P-201ENST00000459274 H0YAA0 97 aa2.84□□□□□ -1.95
RNU1-88P-201ENST00000459274 K7ERS5 55 aa2.84□□□□□ -1.95
RNU1-88P-201ENST00000459274 HERC2O95714 4834 aa2.83□□□□□ -1.96
RNU1-88P-201ENST00000459274 FAT3Q8TDW7 4589 aa2.82□□□□□ -1.96
RNU1-88P-201ENST00000459274 R4GN34 69 aa2.82□□□□□ -1.96
RNU1-88P-201ENST00000459274 PCLOQ9Y6V0 5065 aa2.8□□□□□ -1.96
RNU1-88P-201ENST00000459274 M0QZ58 72 aa2.8□□□□□ -1.96
RNU1-88P-201ENST00000459274 MIR22HGQ0VDD5 57 aa2.8□□□□□ -1.96
RNU1-88P-201ENST00000459274 CRIPTQ9P021 101 aa2.8□□□□□ -1.96
RNU1-88P-201ENST00000459274 ABCA13Q86UQ4 5058 aa2.8□□□□□ -1.96
RNU1-88P-201ENST00000459274 KRTAP19-4Q3LI73 84 aa2.79□□□□□ -1.96
RNU1-88P-201ENST00000459274 Q5VV11 94 aa2.79□□□□□ -1.96
RNU1-88P-201ENST00000459274 BRK1Q8WUW1 75 aa2.79□□□□□ -1.96
RNU1-88P-201ENST00000459274 MT1HP80294 61 aa2.76□□□□□ -1.97
RNU1-88P-201ENST00000459274 KRTAP10-10P60014 251 aa2.75□□□□□ -1.97
RNU1-88P-201ENST00000459274 KRTAP19-2Q3LHN2 52 aa2.75□□□□□ -1.97
RNU1-88P-201ENST00000459274 CDC42SE1Q9NRR8 79 aa2.75□□□□□ -1.97
RNU1-88P-201ENST00000459274 LINC01554Q52M75 96 aa2.74□□□□□ -1.97
RNU1-88P-201ENST00000459274 P0C880 135 aa2.73□□□□□ -1.97
RNU1-88P-201ENST00000459274 KRTAP10-7P60409 375 aaPredicted RBP2.73□□□□□ -1.97
RNU1-88P-201ENST00000459274 SPATA8Q6RVD6 105 aa2.73□□□□□ -1.97
RNU1-88P-201ENST00000459274 A0A0D9SG42 100 aa2.72□□□□□ -1.97
RNU1-88P-201ENST00000459274 LPAP08519 4548 aa2.72□□□□□ -1.97
RNU1-88P-201ENST00000459274 KRTAP10-6P60371 365 aaPredicted RBP2.71□□□□□ -1.98
RNU1-88P-201ENST00000459274 SPINT4Q6UDR6 99 aa2.7□□□□□ -1.98
RNU1-88P-201ENST00000459274 PLAC4Q8WY50 150 aa2.7□□□□□ -1.98
RNU1-88P-201ENST00000459274 PRO0628Q9UI54 55 aa2.7□□□□□ -1.98
RNU1-88P-201ENST00000459274 LRP2P98164 4655 aa2.7□□□□□ -1.98
RNU1-88P-201ENST00000459274 PMAIP1Q13794 54 aa2.67□□□□□ -1.98
RNU1-88P-201ENST00000459274 CAMK2N1Q7Z7J9 78 aa2.67□□□□□ -1.98
RNU1-88P-201ENST00000459274 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
RNU1-88P-201ENST00000459274 A6NN06 94 aa2.64□□□□□ -1.99
RNU1-88P-201ENST00000459274 A8MU10 97 aa2.64□□□□□ -1.99
RNU1-88P-201ENST00000459274 MT2AP02795 61 aa2.64□□□□□ -1.99
RNU1-88P-201ENST00000459274 KRTAP13-4Q3LI77 160 aa2.61□□□□□ -1.99
RNU1-88P-201ENST00000459274 SPRR2GQ9BYE4 73 aa2.61□□□□□ -1.99
RNU1-88P-201ENST00000459274 MT1FP04733 61 aa2.6□□□□□ -1.99
RNU1-88P-201ENST00000459274 HERC1Q15751 4861 aa2.6□□□□□ -1.99
RNU1-88P-201ENST00000459274 PRO2289Q9P1D8 64 aa2.59□□□□□ -1.99
RNU1-88P-201ENST00000459274 KRTAP12-1P59990 96 aa2.58□□□□□ -2
RNU1-88P-201ENST00000459274 MUC17Q685J3 4493 aa2.56□□□□□ -2
RNU1-88P-201ENST00000459274 HMCN2Q8NDA2 5059 aa2.56□□□□□ -2
RNU1-88P-201ENST00000459274 KRTAP12-2P59991 146 aa2.56□□□□□ -2
RNU1-88P-201ENST00000459274 ROMO1P60602 79 aa2.56□□□□□ -2
RNU1-88P-201ENST00000459274 KRTAP19-8Q3LI54 63 aa2.52□□□□□ -2.01
RNU1-88P-201ENST00000459274 MUC2Q02817 5179 aa2.51□□□□□ -2.01
RNU1-88P-201ENST00000459274 TNP1P09430 55 aa2.51□□□□□ -2.01
RNU1-88P-201ENST00000459274 UBR4Q5T4S7 5183 aa2.51□□□□□ -2.01
RNU1-88P-201ENST00000459274 KTN1-AS1Q86SY8 53 aa2.5□□□□□ -2.01
RNU1-88P-201ENST00000459274 KRTAP25-1Q3LHN0 102 aa2.49□□□□□ -2.01
RNU1-88P-201ENST00000459274 RNF213Q63HN8 5207 aa2.47□□□□□ -2.01
RNU1-88P-201ENST00000459274 FLGP20930 4061 aaPredicted RBP2.45□□□□□ -2.02
RNU1-88P-201ENST00000459274 MT1BP07438 61 aa2.44□□□□□ -2.02
RNU1-88P-201ENST00000459274 PP632Q6XCG6 107 aa2.44□□□□□ -2.02
RNU1-88P-201ENST00000459274 C10orf95Q9H7T3 257 aa2.42□□□□□ -2.02
RNU1-88P-201ENST00000459274 KRTAP4-3Q9BYR4 195 aa2.4□□□□□ -2.03
RNU1-88P-201ENST00000459274 FAT4Q6V0I7 4981 aa2.4□□□□□ -2.03
RNU1-88P-201ENST00000459274 KRTAP23-1A1A580 65 aa2.39□□□□□ -2.03
RNU1-88P-201ENST00000459274 KRTAP10-5P60370 271 aa2.39□□□□□ -2.03
RNU1-88P-201ENST00000459274 MT1XP80297 61 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms