RNA–Protein interactions for RNA: ENST00000458729.5

SEMA3C-205, Transcript of semaphorin 3C, humanhuman

TSL 2

Gene SEMA3C, Length 1,318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-205ENST00000458729 KRTAP9-6A0A140TA67 174 aa12.04□□□□□ -0.48
SEMA3C-205ENST00000458729 NDUFC1O43677 76 aa12.04□□□□□ -0.48
SEMA3C-205ENST00000458729 SERP2Q8N6R1 65 aa12.04□□□□□ -0.48
SEMA3C-205ENST00000458729 CRCT1Q9UGL9 99 aa12.02□□□□□ -0.49
SEMA3C-205ENST00000458729 DMAC1Q96GE9 116 aa12.01□□□□□ -0.49
SEMA3C-205ENST00000458729 FSIP2Q5CZC0 6907 aa11.99□□□□□ -0.49
SEMA3C-205ENST00000458729 LCE2BO14633 110 aa11.95□□□□□ -0.5
SEMA3C-205ENST00000458729 SNURFQ9Y675 71 aa11.94□□□□□ -0.5
SEMA3C-205ENST00000458729 C20orf197Q8N268 126 aa11.91□□□□□ -0.5
SEMA3C-205ENST00000458729 USH2AO75445 5202 aa11.89□□□□□ -0.51
SEMA3C-205ENST00000458729 ACYP2P14621 99 aa11.85□□□□□ -0.51
SEMA3C-205ENST00000458729 H0YAA0 97 aa11.82□□□□□ -0.52
SEMA3C-205ENST00000458729 COX7CP15954 63 aa11.79□□□□□ -0.52
SEMA3C-205ENST00000458729 SPANXA2-OT1Q8N9U9 137 aa11.77□□□□□ -0.53
SEMA3C-205ENST00000458729 KRTAP19-1Q8IUB9 90 aa11.7□□□□□ -0.54
SEMA3C-205ENST00000458729 CRIPTQ9P021 101 aa11.69□□□□□ -0.54
SEMA3C-205ENST00000458729 SSPOA2VEC9 5147 aa11.68□□□□□ -0.54
SEMA3C-205ENST00000458729 ADM2Q7Z4H4 148 aa11.66□□□□□ -0.54
SEMA3C-205ENST00000458729 SPRR2GQ9BYE4 73 aa11.66□□□□□ -0.54
SEMA3C-205ENST00000458729 SPTSSBQ8NFR3 76 aa11.63□□□□□ -0.55
SEMA3C-205ENST00000458729 CHKB-CPT1BH3BT56 60 aa11.61□□□□□ -0.55
SEMA3C-205ENST00000458729 ANAPC13Q9BS18 74 aa11.61□□□□□ -0.55
SEMA3C-205ENST00000458729 KRTAP19-8Q3LI54 63 aa11.51□□□□□ -0.57
SEMA3C-205ENST00000458729 H7BZZ5 65 aa11.49□□□□□ -0.57
SEMA3C-205ENST00000458729 KRTAP19-6Q3LI70 58 aa11.49□□□□□ -0.57
SEMA3C-205ENST00000458729 Q5VV11 94 aa11.49□□□□□ -0.57
SEMA3C-205ENST00000458729 CYSTM1Q9H1C7 97 aa11.46□□□□□ -0.57
SEMA3C-205ENST00000458729 P0C880 135 aa11.44□□□□□ -0.58
SEMA3C-205ENST00000458729 KRTAP3-2Q9BYR7 98 aa11.42□□□□□ -0.58
SEMA3C-205ENST00000458729 MT1BP07438 61 aa11.41□□□□□ -0.58
SEMA3C-205ENST00000458729 COA5Q86WW8 74 aa11.38□□□□□ -0.59
SEMA3C-205ENST00000458729 R4GN34 69 aa11.36□□□□□ -0.59
SEMA3C-205ENST00000458729 FCGBPQ9Y6R7 5405 aaPredicted RBP11.35□□□□□ -0.59
SEMA3C-205ENST00000458729 CCDC179H3BU77 68 aa11.34□□□□□ -0.59
SEMA3C-205ENST00000458729 M0QZ58 72 aa11.27□□□□□ -0.61
SEMA3C-205ENST00000458729 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.15□□□□□ -0.62
SEMA3C-205ENST00000458729 A6NN06 94 aa11.14□□□□□ -0.63
SEMA3C-205ENST00000458729 ATP5EP56381 51 aaPredicted RBP11.12□□□□□ -0.63
SEMA3C-205ENST00000458729 PLAC4Q8WY50 150 aa11.09□□□□□ -0.63
SEMA3C-205ENST00000458729 KRTAP10-5P60370 271 aa11.09□□□□□ -0.63
SEMA3C-205ENST00000458729 SEC61GP60059 68 aa11.07□□□□□ -0.64
SEMA3C-205ENST00000458729 LINC01554Q52M75 96 aa11.07□□□□□ -0.64
SEMA3C-205ENST00000458729 SERP1Q9Y6X1 66 aa11.03□□□□□ -0.64
SEMA3C-205ENST00000458729 TMEM258P61165 79 aa10.98□□□□□ -0.65
SEMA3C-205ENST00000458729 PRO2289Q9P1D8 64 aa10.9□□□□□ -0.66
SEMA3C-205ENST00000458729 KRTAP9-7A8MTY7 169 aa10.88□□□□□ -0.67
SEMA3C-205ENST00000458729 MACF1Q9UPN3 7388 aaKnown RBP10.87□□□□□ -0.67
SEMA3C-205ENST00000458729 KRTAP13-4Q3LI77 160 aa10.86□□□□□ -0.67
SEMA3C-205ENST00000458729 A0A1B0GU69 56 aa10.82□□□□□ -0.68
SEMA3C-205ENST00000458729 MT1XP80297 61 aa10.82□□□□□ -0.68
SEMA3C-205ENST00000458729 A0A1B0GU33 70 aa10.81□□□□□ -0.68
SEMA3C-205ENST00000458729 SYNE2Q8WXH0 6885 aaKnown RBP10.68□□□□□ -0.7
SEMA3C-205ENST00000458729 SPATA8Q6RVD6 105 aa10.67□□□□□ -0.7
SEMA3C-205ENST00000458729 PRR15LQ9BU68 103 aa10.66□□□□□ -0.7
SEMA3C-205ENST00000458729 LINC01558Q9Y6Z2 57 aa10.64□□□□□ -0.71
SEMA3C-205ENST00000458729 KRTAP6-3Q3LI67 103 aa10.61□□□□□ -0.71
SEMA3C-205ENST00000458729 A0A0D9SG42 100 aa10.6□□□□□ -0.71
SEMA3C-205ENST00000458729 SMIM26A0A096LP01 95 aa10.52□□□□□ -0.73
SEMA3C-205ENST00000458729 CAMK2N1Q7Z7J9 78 aa10.52□□□□□ -0.73
SEMA3C-205ENST00000458729 KRTAP12-2P59991 146 aa10.51□□□□□ -0.73
SEMA3C-205ENST00000458729 PCP4P48539 62 aa10.46□□□□□ -0.73
SEMA3C-205ENST00000458729 SPINT4Q6UDR6 99 aa10.45□□□□□ -0.74
SEMA3C-205ENST00000458729 KRTAP12-1P59990 96 aa10.4□□□□□ -0.74
SEMA3C-205ENST00000458729 A8MU10 97 aa10.35□□□□□ -0.75
SEMA3C-205ENST00000458729 V9GYY9 64 aa10.34□□□□□ -0.75
SEMA3C-205ENST00000458729 KRTAP10-7P60409 375 aaPredicted RBP10.33□□□□□ -0.76
SEMA3C-205ENST00000458729 KRTAP5-9P26371 169 aa10.32□□□□□ -0.76
SEMA3C-205ENST00000458729 UQCR11O14957 56 aa10.31□□□□□ -0.76
SEMA3C-205ENST00000458729 KRTAP10-12P60413 245 aa10.31□□□□□ -0.76
SEMA3C-205ENST00000458729 KMT2DO14686 5537 aa10.26□□□□□ -0.77
SEMA3C-205ENST00000458729 Q1T7F1 81 aa10.26□□□□□ -0.77
SEMA3C-205ENST00000458729 KRTAP8-1Q8IUC2 63 aa10.24□□□□□ -0.77
SEMA3C-205ENST00000458729 KRTAP4-8A0A0G2JLE6 195 aa10.18□□□□□ -0.78
SEMA3C-205ENST00000458729 KRTAP4-8Q9BYQ9 185 aa10.18□□□□□ -0.78
SEMA3C-205ENST00000458729 RPS28P62857 69 aaKnown RBP10.16□□□□□ -0.78
SEMA3C-205ENST00000458729 PSPHP1O15172 72 aa10.14□□□□□ -0.79
SEMA3C-205ENST00000458729 SPRR2FQ96RM1 72 aa10.11□□□□□ -0.79
SEMA3C-205ENST00000458729 MUC12Q9UKN1 5478 aa10.1□□□□□ -0.79
SEMA3C-205ENST00000458729 MIR22HGQ0VDD5 57 aa10.09□□□□□ -0.79
SEMA3C-205ENST00000458729 NEBP20929 6669 aa10□□□□□ -0.81
SEMA3C-205ENST00000458729 C10orf95Q9H7T3 257 aa9.91□□□□□ -0.82
SEMA3C-205ENST00000458729 MDN1Q9NU22 5596 aa9.9□□□□□ -0.82
SEMA3C-205ENST00000458729 K7ERS5 55 aa9.86□□□□□ -0.83
SEMA3C-205ENST00000458729 A6NED7 52 aa9.85□□□□□ -0.83
SEMA3C-205ENST00000458729 SPRR2EP22531 72 aa9.85□□□□□ -0.83
SEMA3C-205ENST00000458729 SPRR2BP35325 72 aa9.85□□□□□ -0.83
SEMA3C-205ENST00000458729 SPRR2AP35326 72 aa9.85□□□□□ -0.83
SEMA3C-205ENST00000458729 TNP1P09430 55 aa9.83□□□□□ -0.84
SEMA3C-205ENST00000458729 LCE1AQ5T7P2 110 aa9.78□□□□□ -0.84
SEMA3C-205ENST00000458729 KRTAP19-7Q3SYF9 63 aa9.66□□□□□ -0.86
SEMA3C-205ENST00000458729 KRTAP20-1Q3LI63 56 aa9.59□□□□□ -0.87
SEMA3C-205ENST00000458729 MT1EP04732 61 aa9.56□□□□□ -0.88
SEMA3C-205ENST00000458729 LCE3AQ5TA76 89 aa9.56□□□□□ -0.88
SEMA3C-205ENST00000458729 KRTAP19-5Q3LI72 72 aa9.56□□□□□ -0.88
SEMA3C-205ENST00000458729 SPRR2DP22532 72 aa9.52□□□□□ -0.89
SEMA3C-205ENST00000458729 KRTAP25-1Q3LHN0 102 aa9.52□□□□□ -0.89
SEMA3C-205ENST00000458729 CDC42SE1Q9NRR8 79 aa9.51□□□□□ -0.89
SEMA3C-205ENST00000458729 KRTAP2-3P0C7H8 128 aa9.5□□□□□ -0.89
SEMA3C-205ENST00000458729 KRTAP2-4Q9BYR9 128 aa9.5□□□□□ -0.89
SEMA3C-205ENST00000458729 KRTAP19-3Q7Z4W3 81 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms