RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 ZCCHC13Q8WW36 166 aaKnown RBP4.89□□□□□ -1.63
VPS50-207ENST00000458530 KRTAP9-8Q9BYQ0 159 aa4.89□□□□□ -1.63
VPS50-207ENST00000458530 H7BZZ5 65 aa4.87□□□□□ -1.63
VPS50-207ENST00000458530 TPRXLQ17RH7 258 aa4.86□□□□□ -1.63
VPS50-207ENST00000458530 KRTAP13-3Q3SY46 172 aa4.86□□□□□ -1.63
VPS50-207ENST00000458530 Q5W150 140 aa4.86□□□□□ -1.63
VPS50-207ENST00000458530 FAM236DA0A1B0GTK5 79 aa4.85□□□□□ -1.63
VPS50-207ENST00000458530 FAM236CP0DP71 79 aa4.85□□□□□ -1.63
VPS50-207ENST00000458530 CYSTM1Q9H1C7 97 aa4.85□□□□□ -1.63
VPS50-207ENST00000458530 ATP11AUNQ6ZP68 121 aa4.84□□□□□ -1.63
VPS50-207ENST00000458530 SPANXA2-OT1Q8N9U9 137 aa4.84□□□□□ -1.63
VPS50-207ENST00000458530 IGKV2-30P06310 120 aa4.83□□□□□ -1.64
VPS50-207ENST00000458530 C7orf65Q6ZTY9 151 aa4.83□□□□□ -1.64
VPS50-207ENST00000458530 RPL37P61927 97 aaKnown RBP4.82□□□□□ -1.64
VPS50-207ENST00000458530 CYP4F30PQ9H0H9 118 aa4.82□□□□□ -1.64
VPS50-207ENST00000458530 IGKV2D-30A0A075B6S6 120 aa4.8□□□□□ -1.64
VPS50-207ENST00000458530 PCOTHQ58A44 107 aa4.8□□□□□ -1.64
VPS50-207ENST00000458530 CRCT1Q9UGL9 99 aa4.79□□□□□ -1.64
VPS50-207ENST00000458530 SERP1Q9Y6X1 66 aa4.76□□□□□ -1.65
VPS50-207ENST00000458530 HRES1P13985 223 aa4.74□□□□□ -1.65
VPS50-207ENST00000458530 MUC17Q685J3 4493 aa4.73□□□□□ -1.65
VPS50-207ENST00000458530 SPINK7P58062 85 aa4.73□□□□□ -1.65
VPS50-207ENST00000458530 SEC61BP60468 96 aaKnown RBP4.73□□□□□ -1.65
VPS50-207ENST00000458530 RPS28P62857 69 aaKnown RBP4.73□□□□□ -1.65
VPS50-207ENST00000458530 A8MUN3 132 aa4.71□□□□□ -1.66
VPS50-207ENST00000458530 ACYP2P14621 99 aa4.7□□□□□ -1.66
VPS50-207ENST00000458530 DMAC1Q96GE9 116 aa4.7□□□□□ -1.66
VPS50-207ENST00000458530 FSIP2Q5CZC0 6907 aa4.69□□□□□ -1.66
VPS50-207ENST00000458530 COA5Q86WW8 74 aa4.66□□□□□ -1.66
VPS50-207ENST00000458530 C4orf26Q17RF5 130 aa4.65□□□□□ -1.67
VPS50-207ENST00000458530 CHKB-CPT1BH3BT56 60 aa4.64□□□□□ -1.67
VPS50-207ENST00000458530 SMIM26A0A096LP01 95 aa4.63□□□□□ -1.67
VPS50-207ENST00000458530 COX6B2Q6YFQ2 88 aa4.63□□□□□ -1.67
VPS50-207ENST00000458530 RBM12B-AS1Q9P1G2 102 aa4.62□□□□□ -1.67
VPS50-207ENST00000458530 SPTSSBQ8NFR3 76 aa4.61□□□□□ -1.67
VPS50-207ENST00000458530 V9GYY9 64 aa4.59□□□□□ -1.67
VPS50-207ENST00000458530 KRTAP4-1Q9BYQ7 146 aa4.58□□□□□ -1.68
VPS50-207ENST00000458530 MPLKIPQ8TAP9 179 aa4.54□□□□□ -1.68
VPS50-207ENST00000458530 KRTAP19-2Q3LHN2 52 aa4.53□□□□□ -1.68
VPS50-207ENST00000458530 H1FX-AS1Q4G0G2 97 aa4.53□□□□□ -1.68
VPS50-207ENST00000458530 Q1T7F1 81 aa4.52□□□□□ -1.69
VPS50-207ENST00000458530 S4R3F8 94 aa4.51□□□□□ -1.69
VPS50-207ENST00000458530 PRR15LQ9BU68 103 aa4.49□□□□□ -1.69
VPS50-207ENST00000458530 MT1HP80294 61 aa4.48□□□□□ -1.69
VPS50-207ENST00000458530 LINC01558Q9Y6Z2 57 aa4.48□□□□□ -1.69
VPS50-207ENST00000458530 SEC61GP60059 68 aa4.47□□□□□ -1.69
VPS50-207ENST00000458530 KRTAP10-6P60371 365 aaPredicted RBP4.45□□□□□ -1.7
VPS50-207ENST00000458530 A0A1B0GU69 56 aa4.44□□□□□ -1.7
VPS50-207ENST00000458530 LCA10Q71F78 164 aa4.44□□□□□ -1.7
VPS50-207ENST00000458530 CSAG1Q6PB30 78 aa4.42□□□□□ -1.7
VPS50-207ENST00000458530 PSPHP1O15172 72 aa4.4□□□□□ -1.71
VPS50-207ENST00000458530 FLGP20930 4061 aaPredicted RBP4.36□□□□□ -1.71
VPS50-207ENST00000458530 Q5VV11 94 aa4.36□□□□□ -1.71
VPS50-207ENST00000458530 SSPOA2VEC9 5147 aa4.35□□□□□ -1.71
VPS50-207ENST00000458530 LCE1AQ5T7P2 110 aa4.34□□□□□ -1.71
VPS50-207ENST00000458530 A6NED7 52 aa4.33□□□□□ -1.72
VPS50-207ENST00000458530 H0YAA0 97 aa4.32□□□□□ -1.72
VPS50-207ENST00000458530 FCGBPQ9Y6R7 5405 aaPredicted RBP4.32□□□□□ -1.72
VPS50-207ENST00000458530 USH2AO75445 5202 aa4.31□□□□□ -1.72
VPS50-207ENST00000458530 UQCR11O14957 56 aa4.31□□□□□ -1.72
VPS50-207ENST00000458530 A0A1B0GU33 70 aa4.28□□□□□ -1.72
VPS50-207ENST00000458530 ADM2Q7Z4H4 148 aa4.27□□□□□ -1.73
VPS50-207ENST00000458530 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
VPS50-207ENST00000458530 CDC42SE1Q9NRR8 79 aa4.25□□□□□ -1.73
VPS50-207ENST00000458530 M0R2T5 61 aa4.24□□□□□ -1.73
VPS50-207ENST00000458530 MIR22HGQ0VDD5 57 aa4.24□□□□□ -1.73
VPS50-207ENST00000458530 SVIPQ8NHG7 77 aa4.23□□□□□ -1.73
VPS50-207ENST00000458530 SPATA8Q6RVD6 105 aa4.21□□□□□ -1.74
VPS50-207ENST00000458530 M0QZ58 72 aa4.2□□□□□ -1.74
VPS50-207ENST00000458530 P0C880 135 aa4.2□□□□□ -1.74
VPS50-207ENST00000458530 PRO0628Q9UI54 55 aa4.19□□□□□ -1.74
VPS50-207ENST00000458530 CRIPTQ9P021 101 aa4.17□□□□□ -1.74
VPS50-207ENST00000458530 R4GN34 69 aa4.17□□□□□ -1.74
VPS50-207ENST00000458530 K7ERS5 55 aa4.15□□□□□ -1.75
VPS50-207ENST00000458530 SYNE2Q8WXH0 6885 aaKnown RBP4.14□□□□□ -1.75
VPS50-207ENST00000458530 MACF1Q9UPN3 7388 aaKnown RBP4.12□□□□□ -1.75
VPS50-207ENST00000458530 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
VPS50-207ENST00000458530 MT2AP02795 61 aa4.09□□□□□ -1.75
VPS50-207ENST00000458530 KRTAP13-4Q3LI77 160 aa4.09□□□□□ -1.75
VPS50-207ENST00000458530 A0A0D9SG42 100 aa4.08□□□□□ -1.76
VPS50-207ENST00000458530 KRTAP19-6Q3LI70 58 aa4.08□□□□□ -1.76
VPS50-207ENST00000458530 KRTAP2-2Q9BYT5 123 aa4.08□□□□□ -1.76
VPS50-207ENST00000458530 A8MU10 97 aa4.07□□□□□ -1.76
VPS50-207ENST00000458530 MT1FP04733 61 aa4.06□□□□□ -1.76
VPS50-207ENST00000458530 KRTAP10-10P60014 251 aa4.05□□□□□ -1.76
VPS50-207ENST00000458530 LINC01554Q52M75 96 aa4.05□□□□□ -1.76
VPS50-207ENST00000458530 A6NN06 94 aa4.04□□□□□ -1.76
VPS50-207ENST00000458530 PMAIP1Q13794 54 aa4.04□□□□□ -1.76
VPS50-207ENST00000458530 KRTAP10-7P60409 375 aaPredicted RBP4□□□□□ -1.77
VPS50-207ENST00000458530 SPINT4Q6UDR6 99 aa4□□□□□ -1.77
VPS50-207ENST00000458530 SPRR2GQ9BYE4 73 aa4□□□□□ -1.77
VPS50-207ENST00000458530 KRTAP12-1P59990 96 aa3.98□□□□□ -1.77
VPS50-207ENST00000458530 NEBP20929 6669 aa3.97□□□□□ -1.77
VPS50-207ENST00000458530 KRTAP12-2P59991 146 aa3.96□□□□□ -1.78
VPS50-207ENST00000458530 PLAC4Q8WY50 150 aa3.93□□□□□ -1.78
VPS50-207ENST00000458530 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
VPS50-207ENST00000458530 CAMK2N1Q7Z7J9 78 aa3.92□□□□□ -1.78
VPS50-207ENST00000458530 KRTAP20-1Q3LI63 56 aa3.91□□□□□ -1.78
VPS50-207ENST00000458530 MUC12Q9UKN1 5478 aa3.9□□□□□ -1.79
VPS50-207ENST00000458530 ROMO1P60602 79 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms