RNA–Protein interactions for RNA: ENST00000455313.6

PDXDC1-204, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-204ENST00000455313 Q5VV11 94 aa8.56□□□□□ -1.04
PDXDC1-204ENST00000455313 A8MUN3 132 aa8.55□□□□□ -1.04
PDXDC1-204ENST00000455313 COX6B2Q6YFQ2 88 aa8.52□□□□□ -1.04
PDXDC1-204ENST00000455313 KRTAP3-1Q9BYR8 98 aa8.51□□□□□ -1.05
PDXDC1-204ENST00000455313 CHKB-CPT1BH3BT56 60 aa8.47□□□□□ -1.05
PDXDC1-204ENST00000455313 KTN1-AS1Q86SY8 53 aa8.46□□□□□ -1.05
PDXDC1-204ENST00000455313 RBM12B-AS1Q9P1G2 102 aa8.45□□□□□ -1.06
PDXDC1-204ENST00000455313 A8MU10 97 aa8.43□□□□□ -1.06
PDXDC1-204ENST00000455313 RNF213Q63HN8 5207 aa8.42□□□□□ -1.06
PDXDC1-204ENST00000455313 LINC01558Q9Y6Z2 57 aa8.41□□□□□ -1.06
PDXDC1-204ENST00000455313 PRR15LQ9BU68 103 aa8.4□□□□□ -1.06
PDXDC1-204ENST00000455313 A6NN06 94 aa8.37□□□□□ -1.07
PDXDC1-204ENST00000455313 LCA10Q71F78 164 aa8.37□□□□□ -1.07
PDXDC1-204ENST00000455313 KRTAP19-2Q3LHN2 52 aa8.34□□□□□ -1.07
PDXDC1-204ENST00000455313 H1FX-AS1Q4G0G2 97 aa8.34□□□□□ -1.07
PDXDC1-204ENST00000455313 CDC42SE1Q9NRR8 79 aa8.34□□□□□ -1.07
PDXDC1-204ENST00000455313 A6NED7 52 aa8.3□□□□□ -1.08
PDXDC1-204ENST00000455313 SPTSSBQ8NFR3 76 aa8.29□□□□□ -1.08
PDXDC1-204ENST00000455313 S4R3F8 94 aa8.27□□□□□ -1.09
PDXDC1-204ENST00000455313 FLGP20930 4061 aaPredicted RBP8.23□□□□□ -1.09
PDXDC1-204ENST00000455313 FAT4Q6V0I7 4981 aa8.22□□□□□ -1.09
PDXDC1-204ENST00000455313 KRTAP3-3Q9BYR6 98 aa8.21□□□□□ -1.09
PDXDC1-204ENST00000455313 A0A1B0GU69 56 aa8.21□□□□□ -1.1
PDXDC1-204ENST00000455313 LCE2CQ5TA81 110 aa8.18□□□□□ -1.1
PDXDC1-204ENST00000455313 CSAG1Q6PB30 78 aa8.08□□□□□ -1.12
PDXDC1-204ENST00000455313 MT1HP80294 61 aa8.03□□□□□ -1.12
PDXDC1-204ENST00000455313 UQCR11O14957 56 aa7.99□□□□□ -1.13
PDXDC1-204ENST00000455313 SPATA8Q6RVD6 105 aa7.94□□□□□ -1.14
PDXDC1-204ENST00000455313 M0R2T5 61 aa7.94□□□□□ -1.14
PDXDC1-204ENST00000455313 MIR22HGQ0VDD5 57 aa7.93□□□□□ -1.14
PDXDC1-204ENST00000455313 A0A1B0GU33 70 aa7.9□□□□□ -1.15
PDXDC1-204ENST00000455313 H0YAA0 97 aa7.89□□□□□ -1.15
PDXDC1-204ENST00000455313 KRTAP3-2Q9BYR7 98 aa7.89□□□□□ -1.15
PDXDC1-204ENST00000455313 KRTAP10-6P60371 365 aaPredicted RBP7.88□□□□□ -1.15
PDXDC1-204ENST00000455313 LINC01554Q52M75 96 aa7.88□□□□□ -1.15
PDXDC1-204ENST00000455313 ADM2Q7Z4H4 148 aa7.88□□□□□ -1.15
PDXDC1-204ENST00000455313 PRAC1Q96KF2 57 aa7.88□□□□□ -1.15
PDXDC1-204ENST00000455313 P0C880 135 aa7.85□□□□□ -1.15
PDXDC1-204ENST00000455313 LCE2AQ5TA79 106 aaPredicted RBP7.79□□□□□ -1.16
PDXDC1-204ENST00000455313 KRTAP13-4Q3LI77 160 aa7.73□□□□□ -1.17
PDXDC1-204ENST00000455313 KRTAP9-8Q9BYQ0 159 aa7.71□□□□□ -1.17
PDXDC1-204ENST00000455313 LORP23490 312 aaPredicted RBP7.7□□□□□ -1.18
PDXDC1-204ENST00000455313 MT2AP02795 61 aa7.69□□□□□ -1.18
PDXDC1-204ENST00000455313 H3BS24 57 aa7.67□□□□□ -1.18
PDXDC1-204ENST00000455313 MT1FP04733 61 aa7.64□□□□□ -1.19
PDXDC1-204ENST00000455313 R4GN34 69 aa7.62□□□□□ -1.19
PDXDC1-204ENST00000455313 KRTAP10-10P60014 251 aa7.61□□□□□ -1.19
PDXDC1-204ENST00000455313 M0QZ58 72 aa7.6□□□□□ -1.19
PDXDC1-204ENST00000455313 A0A0D9SG42 100 aa7.58□□□□□ -1.2
PDXDC1-204ENST00000455313 CRIPTQ9P021 101 aa7.57□□□□□ -1.2
PDXDC1-204ENST00000455313 K7ERS5 55 aa7.47□□□□□ -1.21
PDXDC1-204ENST00000455313 KRTAP19-1Q8IUB9 90 aa7.47□□□□□ -1.21
PDXDC1-204ENST00000455313 SPRR2GQ9BYE4 73 aa7.47□□□□□ -1.21
PDXDC1-204ENST00000455313 KRTAP25-1Q3LHN0 102 aa7.45□□□□□ -1.22
PDXDC1-204ENST00000455313 KRTAP9-3Q9BYQ3 159 aa7.43□□□□□ -1.22
PDXDC1-204ENST00000455313 KRTAP12-2P59991 146 aa7.42□□□□□ -1.22
PDXDC1-204ENST00000455313 KRTAP12-1P59990 96 aa7.41□□□□□ -1.22
PDXDC1-204ENST00000455313 ROMO1P60602 79 aa7.39□□□□□ -1.23
PDXDC1-204ENST00000455313 SPINT4Q6UDR6 99 aa7.36□□□□□ -1.23
PDXDC1-204ENST00000455313 KRTAP19-8Q3LI54 63 aa7.29□□□□□ -1.24
PDXDC1-204ENST00000455313 LCE2BO14633 110 aa7.26□□□□□ -1.25
PDXDC1-204ENST00000455313 MT1BP07438 61 aa7.21□□□□□ -1.26
PDXDC1-204ENST00000455313 PLAC4Q8WY50 150 aa7.18□□□□□ -1.26
PDXDC1-204ENST00000455313 USH2AO75445 5202 aa7.14□□□□□ -1.27
PDXDC1-204ENST00000455313 CAMK2N1Q7Z7J9 78 aa7.12□□□□□ -1.27
PDXDC1-204ENST00000455313 LCE2DQ5TA82 110 aaPredicted RBP7.08□□□□□ -1.28
PDXDC1-204ENST00000455313 C10orf95Q9H7T3 257 aa7.01□□□□□ -1.29
PDXDC1-204ENST00000455313 FSIP2Q5CZC0 6907 aa6.96□□□□□ -1.29
PDXDC1-204ENST00000455313 MT1XP80297 61 aa6.96□□□□□ -1.3
PDXDC1-204ENST00000455313 KRTAP10-5P60370 271 aa6.94□□□□□ -1.3
PDXDC1-204ENST00000455313 SSPOA2VEC9 5147 aa6.94□□□□□ -1.3
PDXDC1-204ENST00000455313 KRTAP15-1Q3LI76 137 aa6.92□□□□□ -1.3
PDXDC1-204ENST00000455313 KRTAP9-2Q9BYQ4 174 aa6.88□□□□□ -1.31
PDXDC1-204ENST00000455313 PRO2289Q9P1D8 64 aa6.87□□□□□ -1.31
PDXDC1-204ENST00000455313 KRTAP19-6Q3LI70 58 aa6.82□□□□□ -1.32
PDXDC1-204ENST00000455313 NDUFAF8A1L188 74 aa6.79□□□□□ -1.32
PDXDC1-204ENST00000455313 TNP1P09430 55 aa6.75□□□□□ -1.33
PDXDC1-204ENST00000455313 KRTAP10-7P60409 375 aaPredicted RBP6.68□□□□□ -1.34
PDXDC1-204ENST00000455313 FCGBPQ9Y6R7 5405 aaPredicted RBP6.65□□□□□ -1.34
PDXDC1-204ENST00000455313 CRCT1Q9UGL9 99 aa6.61□□□□□ -1.35
PDXDC1-204ENST00000455313 PP632Q6XCG6 107 aa6.59□□□□□ -1.35
PDXDC1-204ENST00000455313 KRTAP10-12P60413 245 aa6.58□□□□□ -1.36
PDXDC1-204ENST00000455313 KMT2DO14686 5537 aa6.53□□□□□ -1.36
PDXDC1-204ENST00000455313 KRTAP23-1A1A580 65 aa6.52□□□□□ -1.37
PDXDC1-204ENST00000455313 LCE3AQ5TA76 89 aa6.51□□□□□ -1.37
PDXDC1-204ENST00000455313 KRTAP4-8A0A0G2JLE6 195 aa6.45□□□□□ -1.38
PDXDC1-204ENST00000455313 KRTAP4-8Q9BYQ9 185 aa6.45□□□□□ -1.38
PDXDC1-204ENST00000455313 A0A0A0MQY5 61 aa6.4□□□□□ -1.39
PDXDC1-204ENST00000455313 KRTAP9-6A0A140TA67 174 aa6.37□□□□□ -1.39
PDXDC1-204ENST00000455313 MACF1Q9UPN3 7388 aaKnown RBP6.36□□□□□ -1.39
PDXDC1-204ENST00000455313 KRTAP8-1Q8IUC2 63 aa6.35□□□□□ -1.39
PDXDC1-204ENST00000455313 LUZP6Q538Z0 58 aa6.32□□□□□ -1.4
PDXDC1-204ENST00000455313 KRTAP19-5Q3LI72 72 aa6.25□□□□□ -1.41
PDXDC1-204ENST00000455313 KRTAP12-3P60328 96 aa6.24□□□□□ -1.41
PDXDC1-204ENST00000455313 KRTAP19-7Q3SYF9 63 aa6.21□□□□□ -1.41
PDXDC1-204ENST00000455313 SYNE2Q8WXH0 6885 aaKnown RBP6.18□□□□□ -1.42
PDXDC1-204ENST00000455313 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.13□□□□□ -1.43
PDXDC1-204ENST00000455313 MT1EP04732 61 aa6.1□□□□□ -1.43
PDXDC1-204ENST00000455313 MUC12Q9UKN1 5478 aa6.07□□□□□ -1.44
PDXDC1-204ENST00000455313 SPRR2FQ96RM1 72 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms