RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 DMAC1Q96GE9 116 aa3.68□□□□□ -1.82
ECHDC1-210ENST00000454859 V9GYY9 64 aa3.67□□□□□ -1.82
ECHDC1-210ENST00000454859 DMBT1Q9UGM3 2413 aaPredicted RBP3.67□□□□□ -1.82
ECHDC1-210ENST00000454859 HERC1Q15751 4861 aa3.67□□□□□ -1.82
ECHDC1-210ENST00000454859 HRES1P13985 223 aa3.66□□□□□ -1.82
ECHDC1-210ENST00000454859 PCOTHQ58A44 107 aa3.66□□□□□ -1.82
ECHDC1-210ENST00000454859 IGKV2D-30A0A075B6S6 120 aa3.66□□□□□ -1.82
ECHDC1-210ENST00000454859 MYCBP2O75592 4640 aa3.65□□□□□ -1.83
ECHDC1-210ENST00000454859 PRR4Q16378 134 aa3.65□□□□□ -1.83
ECHDC1-210ENST00000454859 SPINK7P58062 85 aa3.63□□□□□ -1.83
ECHDC1-210ENST00000454859 COA5Q86WW8 74 aa3.62□□□□□ -1.83
ECHDC1-210ENST00000454859 Q1T7F1 81 aa3.62□□□□□ -1.83
ECHDC1-210ENST00000454859 LRP1Q07954 4544 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-210ENST00000454859 SEC61BP60468 96 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-210ENST00000454859 SPTSSBQ8NFR3 76 aa3.61□□□□□ -1.83
ECHDC1-210ENST00000454859 LCE5AQ5TCM9 118 aa3.6□□□□□ -1.83
ECHDC1-210ENST00000454859 COX6B2Q6YFQ2 88 aa3.59□□□□□ -1.83
ECHDC1-210ENST00000454859 CHKB-CPT1BH3BT56 60 aa3.58□□□□□ -1.84
ECHDC1-210ENST00000454859 LINC01558Q9Y6Z2 57 aa3.55□□□□□ -1.84
ECHDC1-210ENST00000454859 C4orf26Q17RF5 130 aa3.54□□□□□ -1.84
ECHDC1-210ENST00000454859 RBM12B-AS1Q9P1G2 102 aa3.54□□□□□ -1.84
ECHDC1-210ENST00000454859 MPLKIPQ8TAP9 179 aa3.53□□□□□ -1.84
ECHDC1-210ENST00000454859 PRR15LQ9BU68 103 aa3.53□□□□□ -1.84
ECHDC1-210ENST00000454859 PRO0628Q9UI54 55 aa3.51□□□□□ -1.85
ECHDC1-210ENST00000454859 H1FX-AS1Q4G0G2 97 aa3.5□□□□□ -1.85
ECHDC1-210ENST00000454859 KRTAP3-1Q9BYR8 98 aa3.5□□□□□ -1.85
ECHDC1-210ENST00000454859 UBR4Q5T4S7 5183 aa3.5□□□□□ -1.85
ECHDC1-210ENST00000454859 SEC61GP60059 68 aa3.48□□□□□ -1.85
ECHDC1-210ENST00000454859 HMCN2Q8NDA2 5059 aa3.47□□□□□ -1.85
ECHDC1-210ENST00000454859 A0A1B0GU69 56 aa3.45□□□□□ -1.86
ECHDC1-210ENST00000454859 LCE4AQ5TA78 99 aa3.45□□□□□ -1.86
ECHDC1-210ENST00000454859 S4R3F8 94 aa3.45□□□□□ -1.86
ECHDC1-210ENST00000454859 Q5VV11 94 aa3.44□□□□□ -1.86
ECHDC1-210ENST00000454859 RNF213Q63HN8 5207 aa3.42□□□□□ -1.86
ECHDC1-210ENST00000454859 MUC17Q685J3 4493 aa3.42□□□□□ -1.86
ECHDC1-210ENST00000454859 LRP2P98164 4655 aa3.41□□□□□ -1.86
ECHDC1-210ENST00000454859 H0YAA0 97 aa3.41□□□□□ -1.86
ECHDC1-210ENST00000454859 PSPHP1O15172 72 aa3.41□□□□□ -1.86
ECHDC1-210ENST00000454859 CSAG1Q6PB30 78 aa3.41□□□□□ -1.86
ECHDC1-210ENST00000454859 LCA10Q71F78 164 aa3.4□□□□□ -1.87
ECHDC1-210ENST00000454859 KRTAP19-4Q3LI73 84 aa3.39□□□□□ -1.87
ECHDC1-210ENST00000454859 UQCR11O14957 56 aa3.39□□□□□ -1.87
ECHDC1-210ENST00000454859 CDC42SE1Q9NRR8 79 aa3.38□□□□□ -1.87
ECHDC1-210ENST00000454859 A6NED7 52 aa3.37□□□□□ -1.87
ECHDC1-210ENST00000454859 SPATA8Q6RVD6 105 aa3.36□□□□□ -1.87
ECHDC1-210ENST00000454859 BRK1Q8WUW1 75 aa3.36□□□□□ -1.87
ECHDC1-210ENST00000454859 KRTAP9-7A8MTY7 169 aa3.35□□□□□ -1.87
ECHDC1-210ENST00000454859 KRTAP19-2Q3LHN2 52 aa3.35□□□□□ -1.87
ECHDC1-210ENST00000454859 KRTAP4-1Q9BYQ7 146 aa3.35□□□□□ -1.87
ECHDC1-210ENST00000454859 A0A1B0GU33 70 aa3.33□□□□□ -1.88
ECHDC1-210ENST00000454859 LPAP08519 4548 aa3.33□□□□□ -1.88
ECHDC1-210ENST00000454859 MIR22HGQ0VDD5 57 aa3.32□□□□□ -1.88
ECHDC1-210ENST00000454859 KRTAP9-3Q9BYQ3 159 aa3.32□□□□□ -1.88
ECHDC1-210ENST00000454859 PMAIP1Q13794 54 aa3.31□□□□□ -1.88
ECHDC1-210ENST00000454859 M0QZ58 72 aa3.3□□□□□ -1.88
ECHDC1-210ENST00000454859 KRTAP10-6P60371 365 aaPredicted RBP3.29□□□□□ -1.88
ECHDC1-210ENST00000454859 MUC2Q02817 5179 aa3.28□□□□□ -1.88
ECHDC1-210ENST00000454859 CRIPTQ9P021 101 aa3.28□□□□□ -1.88
ECHDC1-210ENST00000454859 ADM2Q7Z4H4 148 aa3.26□□□□□ -1.89
ECHDC1-210ENST00000454859 K7ERS5 55 aa3.25□□□□□ -1.89
ECHDC1-210ENST00000454859 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
ECHDC1-210ENST00000454859 FLGP20930 4061 aaPredicted RBP3.22□□□□□ -1.89
ECHDC1-210ENST00000454859 P0C880 135 aa3.21□□□□□ -1.9
ECHDC1-210ENST00000454859 A6NN06 94 aa3.2□□□□□ -1.9
ECHDC1-210ENST00000454859 KTN1-AS1Q86SY8 53 aa3.19□□□□□ -1.9
ECHDC1-210ENST00000454859 R4GN34 69 aa3.18□□□□□ -1.9
ECHDC1-210ENST00000454859 MT1HP80294 61 aa3.17□□□□□ -1.9
ECHDC1-210ENST00000454859 FAT4Q6V0I7 4981 aa3.16□□□□□ -1.9
ECHDC1-210ENST00000454859 A8MU10 97 aa3.14□□□□□ -1.91
ECHDC1-210ENST00000454859 KRTAP13-4Q3LI77 160 aa3.14□□□□□ -1.91
ECHDC1-210ENST00000454859 M0R2T5 61 aa3.13□□□□□ -1.91
ECHDC1-210ENST00000454859 HMCN1Q96RW7 5635 aa3.13□□□□□ -1.91
ECHDC1-210ENST00000454859 KRTAP12-1P59990 96 aa3.1□□□□□ -1.91
ECHDC1-210ENST00000454859 SPRR2GQ9BYE4 73 aa3.1□□□□□ -1.91
ECHDC1-210ENST00000454859 FSIP2Q5CZC0 6907 aa3.08□□□□□ -1.92
ECHDC1-210ENST00000454859 A0A0D9SG42 100 aa3.08□□□□□ -1.92
ECHDC1-210ENST00000454859 KRTAP5-9P26371 169 aa3.07□□□□□ -1.92
ECHDC1-210ENST00000454859 ROMO1P60602 79 aa3.06□□□□□ -1.92
ECHDC1-210ENST00000454859 MT2AP02795 61 aa3.05□□□□□ -1.92
ECHDC1-210ENST00000454859 KRTAP12-2P59991 146 aa3.04□□□□□ -1.92
ECHDC1-210ENST00000454859 SPINT4Q6UDR6 99 aa3.04□□□□□ -1.92
ECHDC1-210ENST00000454859 KRTAP10-10P60014 251 aa3.03□□□□□ -1.92
ECHDC1-210ENST00000454859 KRTAP23-1A1A580 65 aa3.03□□□□□ -1.92
ECHDC1-210ENST00000454859 KRTAP19-8Q3LI54 63 aa3.02□□□□□ -1.93
ECHDC1-210ENST00000454859 LINC01554Q52M75 96 aa3.02□□□□□ -1.93
ECHDC1-210ENST00000454859 MT1FP04733 61 aa3.01□□□□□ -1.93
ECHDC1-210ENST00000454859 PLAC4Q8WY50 150 aa3.01□□□□□ -1.93
ECHDC1-210ENST00000454859 CAMK2N1Q7Z7J9 78 aa2.98□□□□□ -1.93
ECHDC1-210ENST00000454859 KRTAP25-1Q3LHN0 102 aa2.97□□□□□ -1.93
ECHDC1-210ENST00000454859 PP632Q6XCG6 107 aa2.92□□□□□ -1.94
ECHDC1-210ENST00000454859 C10orf95Q9H7T3 257 aa2.9□□□□□ -1.95
ECHDC1-210ENST00000454859 TNP1P09430 55 aa2.9□□□□□ -1.95
ECHDC1-210ENST00000454859 KRTAP15-1Q3LI76 137 aa2.9□□□□□ -1.95
ECHDC1-210ENST00000454859 PRAC1Q96KF2 57 aa2.9□□□□□ -1.95
ECHDC1-210ENST00000454859 PRO2289Q9P1D8 64 aa2.9□□□□□ -1.95
ECHDC1-210ENST00000454859 MT1BP07438 61 aa2.89□□□□□ -1.95
ECHDC1-210ENST00000454859 USH2AO75445 5202 aa2.82□□□□□ -1.96
ECHDC1-210ENST00000454859 CRCT1Q9UGL9 99 aa2.82□□□□□ -1.96
ECHDC1-210ENST00000454859 KRTAP10-5P60370 271 aa2.81□□□□□ -1.96
ECHDC1-210ENST00000454859 MT1XP80297 61 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms