RNA–Protein interactions for RNA: ENST00000454269.5

HCG18-240, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,430 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-240ENST00000454269 PKD1P98161 4303 aa4.69□□□□□ -1.66
HCG18-240ENST00000454269 DNAH6Q9C0G6 4158 aa4.69□□□□□ -1.66
HCG18-240ENST00000454269 HERC2O95714 4834 aa4.67□□□□□ -1.66
HCG18-240ENST00000454269 KRTAP17-1Q9BYP8 105 aa4.66□□□□□ -1.66
HCG18-240ENST00000454269 RYR1P21817 5038 aa4.66□□□□□ -1.66
HCG18-240ENST00000454269 R4GN34 69 aa4.66□□□□□ -1.66
HCG18-240ENST00000454269 DNAH17Q9UFH2 4485 aa4.64□□□□□ -1.67
HCG18-240ENST00000454269 DNAH11Q96DT5 4516 aa4.63□□□□□ -1.67
HCG18-240ENST00000454269 A0A096LNI7 61 aa4.63□□□□□ -1.67
HCG18-240ENST00000454269 ABCA13Q86UQ4 5058 aa4.62□□□□□ -1.67
HCG18-240ENST00000454269 KRTAP10-2P60368 255 aa4.62□□□□□ -1.67
HCG18-240ENST00000454269 SRRM2Q9UQ35 2752 aaKnown RBP4.62□□□□□ -1.67
HCG18-240ENST00000454269 XP32Q5T750 250 aa4.61□□□□□ -1.67
HCG18-240ENST00000454269 KRTAP1-5Q9BYS1 174 aa4.61□□□□□ -1.67
HCG18-240ENST00000454269 Q6ZRN7 208 aaPredicted RBP4.61□□□□□ -1.67
HCG18-240ENST00000454269 DYNC1H1Q14204 4646 aaKnown RBP4.6□□□□□ -1.67
HCG18-240ENST00000454269 APLNQ9ULZ1 77 aa4.59□□□□□ -1.67
HCG18-240ENST00000454269 HSPG2P98160 4391 aa4.58□□□□□ -1.68
HCG18-240ENST00000454269 LRP1BQ9NZR2 4599 aa4.57□□□□□ -1.68
HCG18-240ENST00000454269 DNAH5Q8TE73 4624 aa4.56□□□□□ -1.68
HCG18-240ENST00000454269 UBE2DNLQ8IWF7 75 aa4.55□□□□□ -1.68
HCG18-240ENST00000454269 APOBP04114 4563 aaKnown RBP4.54□□□□□ -1.68
HCG18-240ENST00000454269 INE1O15225 51 aa4.53□□□□□ -1.68
HCG18-240ENST00000454269 KRTAP4-5Q9BYR2 181 aa4.53□□□□□ -1.68
HCG18-240ENST00000454269 A0A1B0GVY2 172 aa4.52□□□□□ -1.69
HCG18-240ENST00000454269 KRTAP10-8P60410 259 aa4.49□□□□□ -1.69
HCG18-240ENST00000454269 KRTAP13-1Q8IUC0 172 aa4.49□□□□□ -1.69
HCG18-240ENST00000454269 S4R3F8 94 aa4.49□□□□□ -1.69
HCG18-240ENST00000454269 FAT1Q14517 4588 aa4.49□□□□□ -1.69
HCG18-240ENST00000454269 SPINK6Q6UWN8 80 aa4.48□□□□□ -1.69
HCG18-240ENST00000454269 HERC1Q15751 4861 aa4.47□□□□□ -1.69
HCG18-240ENST00000454269 MYCBP2O75592 4640 aa4.46□□□□□ -1.7
HCG18-240ENST00000454269 DNAH8Q96JB1 4490 aa4.45□□□□□ -1.7
HCG18-240ENST00000454269 KRTAP13-4Q3LI77 160 aa4.43□□□□□ -1.7
HCG18-240ENST00000454269 A0A0D9SG42 100 aa4.42□□□□□ -1.7
HCG18-240ENST00000454269 KRTAP4-8Q9BYQ9 185 aa4.41□□□□□ -1.7
HCG18-240ENST00000454269 KRTAP12-2P59991 146 aa4.4□□□□□ -1.7
HCG18-240ENST00000454269 KRTAP9-6A0A140TA67 174 aa4.4□□□□□ -1.71
HCG18-240ENST00000454269 KRTAP9-7A8MTY7 169 aa4.4□□□□□ -1.71
HCG18-240ENST00000454269 KRTAP10-6P60371 365 aaPredicted RBP4.38□□□□□ -1.71
HCG18-240ENST00000454269 LCE4AQ5TA78 99 aa4.38□□□□□ -1.71
HCG18-240ENST00000454269 KRTAP19-1Q8IUB9 90 aa4.37□□□□□ -1.71
HCG18-240ENST00000454269 VPS13BQ7Z7G8 4022 aa4.36□□□□□ -1.71
HCG18-240ENST00000454269 LRP1Q07954 4544 aaKnown RBP4.35□□□□□ -1.71
HCG18-240ENST00000454269 KRTAP9-4Q9BYQ2 154 aa4.34□□□□□ -1.72
HCG18-240ENST00000454269 DMBT1Q9UGM3 2413 aaPredicted RBP4.34□□□□□ -1.72
HCG18-240ENST00000454269 KRTAP12-1P59990 96 aa4.32□□□□□ -1.72
HCG18-240ENST00000454269 KRTAP10-1P60331 282 aa4.32□□□□□ -1.72
HCG18-240ENST00000454269 SMR3BP02814 79 aaPredicted RBP4.31□□□□□ -1.72
HCG18-240ENST00000454269 KRTAP9-9Q9BYP9 154 aa4.31□□□□□ -1.72
HCG18-240ENST00000454269 KRTAP9-2Q9BYQ4 174 aa4.3□□□□□ -1.72
HCG18-240ENST00000454269 SPRR5A0A1B0GTR4 108 aa4.29□□□□□ -1.72
HCG18-240ENST00000454269 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.27□□□□□ -1.73
HCG18-240ENST00000454269 FAT3Q8TDW7 4589 aa4.25□□□□□ -1.73
HCG18-240ENST00000454269 Q5VSD8 79 aa4.25□□□□□ -1.73
HCG18-240ENST00000454269 PKHD1L1Q86WI1 4243 aa4.24□□□□□ -1.73
HCG18-240ENST00000454269 UBR4Q5T4S7 5183 aa4.24□□□□□ -1.73
HCG18-240ENST00000454269 KRTAP4-12Q9BQ66 201 aa4.24□□□□□ -1.73
HCG18-240ENST00000454269 PP632Q6XCG6 107 aa4.23□□□□□ -1.73
HCG18-240ENST00000454269 LCE3BQ5TA77 95 aa4.2□□□□□ -1.74
HCG18-240ENST00000454269 HMCN2Q8NDA2 5059 aa4.2□□□□□ -1.74
HCG18-240ENST00000454269 KRTAP10-4P60372 401 aaPredicted RBP4.17□□□□□ -1.74
HCG18-240ENST00000454269 KRTAP13-2Q52LG2 175 aa4.15□□□□□ -1.75
HCG18-240ENST00000454269 TNXBP22105 4242 aa4.14□□□□□ -1.75
HCG18-240ENST00000454269 RNF213Q63HN8 5207 aa4.14□□□□□ -1.75
HCG18-240ENST00000454269 KRTAP9-3Q9BYQ3 159 aa4.14□□□□□ -1.75
HCG18-240ENST00000454269 LRP2P98164 4655 aa4.13□□□□□ -1.75
HCG18-240ENST00000454269 KRTAP1-4P0C5Y4 121 aa4.13□□□□□ -1.75
HCG18-240ENST00000454269 LCE5AQ5TCM9 118 aa4.12□□□□□ -1.75
HCG18-240ENST00000454269 LPAP08519 4548 aa4.09□□□□□ -1.76
HCG18-240ENST00000454269 M0QZ58 72 aa4.09□□□□□ -1.76
HCG18-240ENST00000454269 MT1HL1P0DM35 61 aa4.05□□□□□ -1.76
HCG18-240ENST00000454269 KRTAP4-8A0A0G2JLE6 195 aa4.04□□□□□ -1.76
HCG18-240ENST00000454269 MUC2Q02817 5179 aa4□□□□□ -1.77
HCG18-240ENST00000454269 LCE1DQ5T752 114 aa3.95□□□□□ -1.78
HCG18-240ENST00000454269 RPS29P62273 56 aaKnown RBP3.94□□□□□ -1.78
HCG18-240ENST00000454269 KRTAP4-7Q9BYR0 210 aa3.9□□□□□ -1.78
HCG18-240ENST00000454269 C9orf92A6NGG3 77 aa3.89□□□□□ -1.79
HCG18-240ENST00000454269 FAT4Q6V0I7 4981 aa3.84□□□□□ -1.8
HCG18-240ENST00000454269 KRTAP4-9Q9BYQ8 210 aa3.83□□□□□ -1.8
HCG18-240ENST00000454269 LCE1AQ5T7P2 110 aa3.72□□□□□ -1.81
HCG18-240ENST00000454269 KRTAP4-2Q9BYR5 136 aa3.71□□□□□ -1.82
HCG18-240ENST00000454269 MUC17Q685J3 4493 aa3.7□□□□□ -1.82
HCG18-240ENST00000454269 KRTAP10-10P60014 251 aa3.7□□□□□ -1.82
HCG18-240ENST00000454269 KRTAP4-11Q9BYQ6 195 aa3.69□□□□□ -1.82
HCG18-240ENST00000454269 KRTAP4-1Q9BYQ7 146 aa3.65□□□□□ -1.83
HCG18-240ENST00000454269 TNP1P09430 55 aa3.64□□□□□ -1.83
HCG18-240ENST00000454269 FSIP2Q5CZC0 6907 aa3.62□□□□□ -1.83
HCG18-240ENST00000454269 KRTAP2-2Q9BYT5 123 aa3.52□□□□□ -1.85
HCG18-240ENST00000454269 KRTAP19-2Q3LHN2 52 aa3.52□□□□□ -1.85
HCG18-240ENST00000454269 FLGP20930 4061 aaPredicted RBP3.52□□□□□ -1.85
HCG18-240ENST00000454269 MT3P25713 68 aa3.46□□□□□ -1.85
HCG18-240ENST00000454269 MT1HP80294 61 aa3.45□□□□□ -1.86
HCG18-240ENST00000454269 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
HCG18-240ENST00000454269 USH2AO75445 5202 aa3.42□□□□□ -1.86
HCG18-240ENST00000454269 KRTAP9-8Q9BYQ0 159 aa3.41□□□□□ -1.86
HCG18-240ENST00000454269 KRTAP5-3Q6L8H2 238 aa3.37□□□□□ -1.87
HCG18-240ENST00000454269 CRCT1Q9UGL9 99 aa3.37□□□□□ -1.87
HCG18-240ENST00000454269 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
HCG18-240ENST00000454269 SSPOA2VEC9 5147 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms