RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 H1FX-AS1Q4G0G2 97 aa10.72□□□□□ -0.69
CTU2-202ENST00000453996 PSPHP1O15172 72 aa10.7□□□□□ -0.7
CTU2-202ENST00000453996 PRR15LQ9BU68 103 aa10.69□□□□□ -0.7
CTU2-202ENST00000453996 PRO0628Q9UI54 55 aa10.69□□□□□ -0.7
CTU2-202ENST00000453996 S4R3F8 94 aa10.68□□□□□ -0.7
CTU2-202ENST00000453996 LCA10Q71F78 164 aa10.65□□□□□ -0.7
CTU2-202ENST00000453996 KRTAP3-3Q9BYR6 98 aa10.6□□□□□ -0.71
CTU2-202ENST00000453996 Q5VV11 94 aa10.6□□□□□ -0.71
CTU2-202ENST00000453996 A0A1B0GU69 56 aa10.57□□□□□ -0.72
CTU2-202ENST00000453996 BRK1Q8WUW1 75 aa10.54□□□□□ -0.72
CTU2-202ENST00000453996 SEC61GP60059 68 aa10.49□□□□□ -0.73
CTU2-202ENST00000453996 KRTAP19-2Q3LHN2 52 aa10.49□□□□□ -0.73
CTU2-202ENST00000453996 MUC2Q02817 5179 aa10.48□□□□□ -0.73
CTU2-202ENST00000453996 CSAG1Q6PB30 78 aa10.42□□□□□ -0.74
CTU2-202ENST00000453996 UBR4Q5T4S7 5183 aa10.38□□□□□ -0.75
CTU2-202ENST00000453996 A6NED7 52 aa10.38□□□□□ -0.75
CTU2-202ENST00000453996 RNF213Q63HN8 5207 aa10.33□□□□□ -0.76
CTU2-202ENST00000453996 FLGP20930 4061 aaPredicted RBP10.3□□□□□ -0.76
CTU2-202ENST00000453996 UQCR11O14957 56 aa10.26□□□□□ -0.77
CTU2-202ENST00000453996 KRTAP3-2Q9BYR7 98 aa10.24□□□□□ -0.77
CTU2-202ENST00000453996 KRTAP10-6P60371 365 aaPredicted RBP10.24□□□□□ -0.77
CTU2-202ENST00000453996 A0A1B0GU33 70 aa10.22□□□□□ -0.77
CTU2-202ENST00000453996 LCE2CQ5TA81 110 aa10.22□□□□□ -0.77
CTU2-202ENST00000453996 ADM2Q7Z4H4 148 aa10.21□□□□□ -0.77
CTU2-202ENST00000453996 H0YAA0 97 aa10.2□□□□□ -0.78
CTU2-202ENST00000453996 CDC42SE1Q9NRR8 79 aa10.2□□□□□ -0.78
CTU2-202ENST00000453996 P0C880 135 aa10.16□□□□□ -0.78
CTU2-202ENST00000453996 MIR22HGQ0VDD5 57 aa10.16□□□□□ -0.78
CTU2-202ENST00000453996 A8MU10 97 aa10.14□□□□□ -0.79
CTU2-202ENST00000453996 SPATA8Q6RVD6 105 aa10.13□□□□□ -0.79
CTU2-202ENST00000453996 FAT4Q6V0I7 4981 aa10.04□□□□□ -0.8
CTU2-202ENST00000453996 MT1HP80294 61 aa10.02□□□□□ -0.81
CTU2-202ENST00000453996 PMAIP1Q13794 54 aa10□□□□□ -0.81
CTU2-202ENST00000453996 KRTAP13-4Q3LI77 160 aa9.98□□□□□ -0.81
CTU2-202ENST00000453996 M0R2T5 61 aa9.96□□□□□ -0.81
CTU2-202ENST00000453996 M0QZ58 72 aa9.91□□□□□ -0.82
CTU2-202ENST00000453996 A6NN06 94 aa9.86□□□□□ -0.83
CTU2-202ENST00000453996 R4GN34 69 aa9.85□□□□□ -0.83
CTU2-202ENST00000453996 LORP23490 312 aaPredicted RBP9.83□□□□□ -0.84
CTU2-202ENST00000453996 A0A0D9SG42 100 aa9.82□□□□□ -0.84
CTU2-202ENST00000453996 KTN1-AS1Q86SY8 53 aa9.81□□□□□ -0.84
CTU2-202ENST00000453996 CRIPTQ9P021 101 aa9.73□□□□□ -0.85
CTU2-202ENST00000453996 K7ERS5 55 aa9.7□□□□□ -0.86
CTU2-202ENST00000453996 LINC01554Q52M75 96 aa9.68□□□□□ -0.86
CTU2-202ENST00000453996 MT2AP02795 61 aa9.65□□□□□ -0.86
CTU2-202ENST00000453996 KRTAP9-8Q9BYQ0 159 aa9.65□□□□□ -0.86
CTU2-202ENST00000453996 KRTAP12-1P59990 96 aa9.6□□□□□ -0.87
CTU2-202ENST00000453996 MT1FP04733 61 aa9.6□□□□□ -0.87
CTU2-202ENST00000453996 KRTAP12-2P59991 146 aa9.59□□□□□ -0.87
CTU2-202ENST00000453996 KRTAP10-10P60014 251 aa9.59□□□□□ -0.87
CTU2-202ENST00000453996 SPINT4Q6UDR6 99 aa9.58□□□□□ -0.88
CTU2-202ENST00000453996 LCE2AQ5TA79 106 aaPredicted RBP9.56□□□□□ -0.88
CTU2-202ENST00000453996 SPRR2GQ9BYE4 73 aa9.5□□□□□ -0.89
CTU2-202ENST00000453996 KRTAP19-1Q8IUB9 90 aa9.45□□□□□ -0.9
CTU2-202ENST00000453996 KRTAP9-3Q9BYQ3 159 aa9.3□□□□□ -0.92
CTU2-202ENST00000453996 ROMO1P60602 79 aa9.29□□□□□ -0.92
CTU2-202ENST00000453996 CAMK2N1Q7Z7J9 78 aa9.24□□□□□ -0.93
CTU2-202ENST00000453996 KRTAP19-8Q3LI54 63 aa9.23□□□□□ -0.93
CTU2-202ENST00000453996 PLAC4Q8WY50 150 aa9.22□□□□□ -0.93
CTU2-202ENST00000453996 PRAC1Q96KF2 57 aa9.22□□□□□ -0.93
CTU2-202ENST00000453996 MT1BP07438 61 aa9.1□□□□□ -0.95
CTU2-202ENST00000453996 C10orf95Q9H7T3 257 aa9.08□□□□□ -0.96
CTU2-202ENST00000453996 LCE2BO14633 110 aa9.03□□□□□ -0.96
CTU2-202ENST00000453996 KRTAP25-1Q3LHN0 102 aa8.94□□□□□ -0.98
CTU2-202ENST00000453996 MT1XP80297 61 aa8.83□□□□□ -1
CTU2-202ENST00000453996 KRTAP10-5P60370 271 aa8.82□□□□□ -1
CTU2-202ENST00000453996 TNP1P09430 55 aa8.8□□□□□ -1
CTU2-202ENST00000453996 USH2AO75445 5202 aa8.78□□□□□ -1
CTU2-202ENST00000453996 PRO2289Q9P1D8 64 aa8.75□□□□□ -1.01
CTU2-202ENST00000453996 KRTAP9-2Q9BYQ4 174 aa8.71□□□□□ -1.01
CTU2-202ENST00000453996 LCE2DQ5TA82 110 aaPredicted RBP8.65□□□□□ -1.02
CTU2-202ENST00000453996 PP632Q6XCG6 107 aa8.58□□□□□ -1.04
CTU2-202ENST00000453996 KRTAP23-1A1A580 65 aa8.54□□□□□ -1.04
CTU2-202ENST00000453996 SSPOA2VEC9 5147 aa8.52□□□□□ -1.05
CTU2-202ENST00000453996 KRTAP10-7P60409 375 aaPredicted RBP8.48□□□□□ -1.05
CTU2-202ENST00000453996 KRTAP19-6Q3LI70 58 aa8.46□□□□□ -1.05
CTU2-202ENST00000453996 KRTAP10-12P60413 245 aa8.43□□□□□ -1.06
CTU2-202ENST00000453996 LCE3AQ5TA76 89 aa8.41□□□□□ -1.06
CTU2-202ENST00000453996 KRTAP9-6A0A140TA67 174 aa8.4□□□□□ -1.06
CTU2-202ENST00000453996 FSIP2Q5CZC0 6907 aa8.38□□□□□ -1.07
CTU2-202ENST00000453996 CRCT1Q9UGL9 99 aa8.25□□□□□ -1.09
CTU2-202ENST00000453996 KRTAP8-1Q8IUC2 63 aa8.23□□□□□ -1.09
CTU2-202ENST00000453996 KRTAP4-8A0A0G2JLE6 195 aa8.11□□□□□ -1.11
CTU2-202ENST00000453996 KRTAP4-8Q9BYQ9 185 aa8.11□□□□□ -1.11
CTU2-202ENST00000453996 FCGBPQ9Y6R7 5405 aaPredicted RBP8.11□□□□□ -1.11
CTU2-202ENST00000453996 KMT2DO14686 5537 aa8.09□□□□□ -1.12
CTU2-202ENST00000453996 KRTAP12-3P60328 96 aa8.07□□□□□ -1.12
CTU2-202ENST00000453996 KRTAP15-1Q3LI76 137 aa8.07□□□□□ -1.12
CTU2-202ENST00000453996 KRTAP19-5Q3LI72 72 aa8□□□□□ -1.13
CTU2-202ENST00000453996 KRTAP19-7Q3SYF9 63 aa7.87□□□□□ -1.15
CTU2-202ENST00000453996 H3BS24 57 aa7.84□□□□□ -1.15
CTU2-202ENST00000453996 MACF1Q9UPN3 7388 aaKnown RBP7.76□□□□□ -1.17
CTU2-202ENST00000453996 MT1EP04732 61 aa7.74□□□□□ -1.17
CTU2-202ENST00000453996 NDUFAF8A1L188 74 aa7.71□□□□□ -1.17
CTU2-202ENST00000453996 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.64□□□□□ -1.19
CTU2-202ENST00000453996 SPRR5A0A1B0GTR4 108 aa7.63□□□□□ -1.19
CTU2-202ENST00000453996 MT1LQ93083 61 aa7.59□□□□□ -1.19
CTU2-202ENST00000453996 KRTAP9-7A8MTY7 169 aa7.58□□□□□ -1.2
CTU2-202ENST00000453996 LCE3CQ5T5A8 94 aa7.55□□□□□ -1.2
CTU2-202ENST00000453996 SPRR2FQ96RM1 72 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms