RNA–Protein interactions for RNA: ENST00000453297.5

MCF2L-219, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 1,819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-219ENST00000453297 SPTSSBQ8NFR3 76 aa12.37□□□□□ -0.43
MCF2L-219ENST00000453297 HMCN2Q8NDA2 5059 aa12.35□□□□□ -0.43
MCF2L-219ENST00000453297 H1FX-AS1Q4G0G2 97 aa12.32□□□□□ -0.44
MCF2L-219ENST00000453297 Q5VV11 94 aa12.31□□□□□ -0.44
MCF2L-219ENST00000453297 LCA10Q71F78 164 aa12.27□□□□□ -0.45
MCF2L-219ENST00000453297 S4R3F8 94 aa12.27□□□□□ -0.45
MCF2L-219ENST00000453297 KRTAP3-3Q9BYR6 98 aa12.25□□□□□ -0.45
MCF2L-219ENST00000453297 A0A1B0GU69 56 aa12.22□□□□□ -0.45
MCF2L-219ENST00000453297 SEC61GP60059 68 aa12.09□□□□□ -0.47
MCF2L-219ENST00000453297 KRTAP19-2Q3LHN2 52 aa12.09□□□□□ -0.47
MCF2L-219ENST00000453297 A6NED7 52 aa12.02□□□□□ -0.48
MCF2L-219ENST00000453297 BRK1Q8WUW1 75 aa12.01□□□□□ -0.49
MCF2L-219ENST00000453297 CSAG1Q6PB30 78 aa11.97□□□□□ -0.49
MCF2L-219ENST00000453297 MUC2Q02817 5179 aa11.93□□□□□ -0.5
MCF2L-219ENST00000453297 UQCR11O14957 56 aa11.86□□□□□ -0.51
MCF2L-219ENST00000453297 A8MU10 97 aa11.85□□□□□ -0.51
MCF2L-219ENST00000453297 KRTAP3-2Q9BYR7 98 aa11.85□□□□□ -0.51
MCF2L-219ENST00000453297 KRTAP10-6P60371 365 aaPredicted RBP11.83□□□□□ -0.51
MCF2L-219ENST00000453297 CDC42SE1Q9NRR8 79 aa11.83□□□□□ -0.51
MCF2L-219ENST00000453297 A0A1B0GU33 70 aa11.81□□□□□ -0.52
MCF2L-219ENST00000453297 PRO0628Q9UI54 55 aa11.8□□□□□ -0.52
MCF2L-219ENST00000453297 SPATA8Q6RVD6 105 aa11.76□□□□□ -0.53
MCF2L-219ENST00000453297 MIR22HGQ0VDD5 57 aa11.76□□□□□ -0.53
MCF2L-219ENST00000453297 ADM2Q7Z4H4 148 aa11.76□□□□□ -0.53
MCF2L-219ENST00000453297 UBR4Q5T4S7 5183 aa11.75□□□□□ -0.53
MCF2L-219ENST00000453297 LCE2CQ5TA81 110 aa11.74□□□□□ -0.53
MCF2L-219ENST00000453297 P0C880 135 aa11.73□□□□□ -0.53
MCF2L-219ENST00000453297 FLGP20930 4061 aaPredicted RBP11.73□□□□□ -0.53
MCF2L-219ENST00000453297 RNF213Q63HN8 5207 aa11.73□□□□□ -0.53
MCF2L-219ENST00000453297 H0YAA0 97 aa11.72□□□□□ -0.53
MCF2L-219ENST00000453297 KRTAP13-4Q3LI77 160 aa11.55□□□□□ -0.56
MCF2L-219ENST00000453297 MT1HP80294 61 aa11.47□□□□□ -0.57
MCF2L-219ENST00000453297 FAT4Q6V0I7 4981 aa11.42□□□□□ -0.58
MCF2L-219ENST00000453297 M0QZ58 72 aa11.4□□□□□ -0.58
MCF2L-219ENST00000453297 M0R2T5 61 aa11.37□□□□□ -0.59
MCF2L-219ENST00000453297 LORP23490 312 aaPredicted RBP11.37□□□□□ -0.59
MCF2L-219ENST00000453297 PMAIP1Q13794 54 aa11.35□□□□□ -0.59
MCF2L-219ENST00000453297 A0A0D9SG42 100 aa11.33□□□□□ -0.6
MCF2L-219ENST00000453297 R4GN34 69 aa11.31□□□□□ -0.6
MCF2L-219ENST00000453297 A6NN06 94 aa11.28□□□□□ -0.6
MCF2L-219ENST00000453297 K7ERS5 55 aa11.16□□□□□ -0.62
MCF2L-219ENST00000453297 CRIPTQ9P021 101 aa11.14□□□□□ -0.63
MCF2L-219ENST00000453297 LINC01554Q52M75 96 aa11.14□□□□□ -0.63
MCF2L-219ENST00000453297 SVIPQ8NHG7 77 aa11.11□□□□□ -0.63
MCF2L-219ENST00000453297 KRTAP12-1P59990 96 aa11.1□□□□□ -0.63
MCF2L-219ENST00000453297 KRTAP12-2P59991 146 aa11.09□□□□□ -0.63
MCF2L-219ENST00000453297 KRTAP9-8Q9BYQ0 159 aa11.08□□□□□ -0.64
MCF2L-219ENST00000453297 MT2AP02795 61 aa11.07□□□□□ -0.64
MCF2L-219ENST00000453297 SPINT4Q6UDR6 99 aa11.05□□□□□ -0.64
MCF2L-219ENST00000453297 MT1FP04733 61 aa11□□□□□ -0.65
MCF2L-219ENST00000453297 KRTAP10-10P60014 251 aa10.98□□□□□ -0.65
MCF2L-219ENST00000453297 LCE2AQ5TA79 106 aaPredicted RBP10.91□□□□□ -0.66
MCF2L-219ENST00000453297 KTN1-AS1Q86SY8 53 aa10.91□□□□□ -0.66
MCF2L-219ENST00000453297 SPRR2GQ9BYE4 73 aa10.91□□□□□ -0.66
MCF2L-219ENST00000453297 KRTAP19-1Q8IUB9 90 aa10.88□□□□□ -0.67
MCF2L-219ENST00000453297 ROMO1P60602 79 aa10.76□□□□□ -0.69
MCF2L-219ENST00000453297 KRTAP9-3Q9BYQ3 159 aa10.68□□□□□ -0.7
MCF2L-219ENST00000453297 PRAC1Q96KF2 57 aa10.65□□□□□ -0.71
MCF2L-219ENST00000453297 CAMK2N1Q7Z7J9 78 aa10.61□□□□□ -0.71
MCF2L-219ENST00000453297 KRTAP19-8Q3LI54 63 aa10.6□□□□□ -0.71
MCF2L-219ENST00000453297 PLAC4Q8WY50 150 aa10.57□□□□□ -0.72
MCF2L-219ENST00000453297 C10orf95Q9H7T3 257 aa10.51□□□□□ -0.73
MCF2L-219ENST00000453297 MT1BP07438 61 aa10.46□□□□□ -0.74
MCF2L-219ENST00000453297 LCE2BO14633 110 aa10.36□□□□□ -0.75
MCF2L-219ENST00000453297 KRTAP25-1Q3LHN0 102 aa10.35□□□□□ -0.75
MCF2L-219ENST00000453297 MT1XP80297 61 aa10.15□□□□□ -0.78
MCF2L-219ENST00000453297 KRTAP10-5P60370 271 aa10.14□□□□□ -0.79
MCF2L-219ENST00000453297 TNP1P09430 55 aa10.12□□□□□ -0.79
MCF2L-219ENST00000453297 USH2AO75445 5202 aa9.98□□□□□ -0.81
MCF2L-219ENST00000453297 PRO2289Q9P1D8 64 aa9.98□□□□□ -0.81
MCF2L-219ENST00000453297 PP632Q6XCG6 107 aa9.88□□□□□ -0.83
MCF2L-219ENST00000453297 KRTAP23-1A1A580 65 aa9.84□□□□□ -0.83
MCF2L-219ENST00000453297 LCE2DQ5TA82 110 aaPredicted RBP9.84□□□□□ -0.83
MCF2L-219ENST00000453297 KRTAP10-7P60409 375 aaPredicted RBP9.76□□□□□ -0.85
MCF2L-219ENST00000453297 LCE3AQ5TA76 89 aa9.7□□□□□ -0.86
MCF2L-219ENST00000453297 KRTAP10-12P60413 245 aa9.66□□□□□ -0.86
MCF2L-219ENST00000453297 KRTAP19-6Q3LI70 58 aa9.66□□□□□ -0.86
MCF2L-219ENST00000453297 SSPOA2VEC9 5147 aa9.66□□□□□ -0.86
MCF2L-219ENST00000453297 KRTAP8-1Q8IUC2 63 aa9.49□□□□□ -0.89
MCF2L-219ENST00000453297 FSIP2Q5CZC0 6907 aa9.46□□□□□ -0.89
MCF2L-219ENST00000453297 KRTAP9-2Q9BYQ4 174 aa9.37□□□□□ -0.91
MCF2L-219ENST00000453297 KRTAP4-8A0A0G2JLE6 195 aa9.35□□□□□ -0.91
MCF2L-219ENST00000453297 KRTAP4-8Q9BYQ9 185 aa9.35□□□□□ -0.91
MCF2L-219ENST00000453297 KRTAP12-3P60328 96 aa9.29□□□□□ -0.92
MCF2L-219ENST00000453297 KMT2DO14686 5537 aa9.24□□□□□ -0.93
MCF2L-219ENST00000453297 KRTAP19-5Q3LI72 72 aa9.21□□□□□ -0.94
MCF2L-219ENST00000453297 FCGBPQ9Y6R7 5405 aaPredicted RBP9.2□□□□□ -0.94
MCF2L-219ENST00000453297 KRTAP15-1Q3LI76 137 aa9.2□□□□□ -0.94
MCF2L-219ENST00000453297 CRCT1Q9UGL9 99 aa9.07□□□□□ -0.96
MCF2L-219ENST00000453297 KRTAP19-7Q3SYF9 63 aa9.05□□□□□ -0.96
MCF2L-219ENST00000453297 MT1EP04732 61 aa8.88□□□□□ -0.99
MCF2L-219ENST00000453297 SPRR5A0A1B0GTR4 108 aa8.86□□□□□ -0.99
MCF2L-219ENST00000453297 MACF1Q9UPN3 7388 aaKnown RBP8.75□□□□□ -1.01
MCF2L-219ENST00000453297 MT1LQ93083 61 aa8.73□□□□□ -1.01
MCF2L-219ENST00000453297 LCE3CQ5T5A8 94 aa8.7□□□□□ -1.02
MCF2L-219ENST00000453297 KRTAP19-4Q3LI73 84 aa8.63□□□□□ -1.03
MCF2L-219ENST00000453297 SPRR2FQ96RM1 72 aa8.61□□□□□ -1.03
MCF2L-219ENST00000453297 LUZP6Q538Z0 58 aa8.59□□□□□ -1.03
MCF2L-219ENST00000453297 KRTAP9-6A0A140TA67 174 aa8.56□□□□□ -1.04
MCF2L-219ENST00000453297 NDUFAF8A1L188 74 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms