RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 SMIM26A0A096LP01 95 aa9.92□□□□□ -0.82
HIGD1A-204ENST00000452906 SPTSSBQ8NFR3 76 aa9.91□□□□□ -0.82
HIGD1A-204ENST00000452906 KRTAP3-1Q9BYR8 98 aa9.91□□□□□ -0.82
HIGD1A-204ENST00000452906 LCE2CQ5TA81 110 aa9.9□□□□□ -0.82
HIGD1A-204ENST00000452906 KRTAP19-2Q3LHN2 52 aa9.87□□□□□ -0.83
HIGD1A-204ENST00000452906 H1FX-AS1Q4G0G2 97 aa9.87□□□□□ -0.83
HIGD1A-204ENST00000452906 LCE2DQ5TA82 110 aaPredicted RBP9.87□□□□□ -0.83
HIGD1A-204ENST00000452906 V9GYY9 64 aa9.81□□□□□ -0.84
HIGD1A-204ENST00000452906 MT1HP80294 61 aa9.8□□□□□ -0.84
HIGD1A-204ENST00000452906 S4R3F8 94 aa9.8□□□□□ -0.84
HIGD1A-204ENST00000452906 Q1T7F1 81 aa9.72□□□□□ -0.85
HIGD1A-204ENST00000452906 LCA10Q71F78 164 aa9.69□□□□□ -0.86
HIGD1A-204ENST00000452906 FSIP2Q5CZC0 6907 aa9.66□□□□□ -0.86
HIGD1A-204ENST00000452906 LINC01558Q9Y6Z2 57 aa9.66□□□□□ -0.86
HIGD1A-204ENST00000452906 LORP23490 312 aaPredicted RBP9.65□□□□□ -0.86
HIGD1A-204ENST00000452906 CRCT1Q9UGL9 99 aa9.65□□□□□ -0.86
HIGD1A-204ENST00000452906 M0R2T5 61 aa9.64□□□□□ -0.87
HIGD1A-204ENST00000452906 KRTAP10-6P60371 365 aaPredicted RBP9.64□□□□□ -0.87
HIGD1A-204ENST00000452906 PRR15LQ9BU68 103 aa9.61□□□□□ -0.87
HIGD1A-204ENST00000452906 CSAG1Q6PB30 78 aa9.6□□□□□ -0.87
HIGD1A-204ENST00000452906 SEC61GP60059 68 aa9.59□□□□□ -0.87
HIGD1A-204ENST00000452906 KRTAP3-3Q9BYR6 98 aa9.59□□□□□ -0.87
HIGD1A-204ENST00000452906 FLGP20930 4061 aaPredicted RBP9.58□□□□□ -0.88
HIGD1A-204ENST00000452906 A0A1B0GU69 56 aa9.55□□□□□ -0.88
HIGD1A-204ENST00000452906 PSPHP1O15172 72 aa9.47□□□□□ -0.89
HIGD1A-204ENST00000452906 H0YAA0 97 aa9.42□□□□□ -0.9
HIGD1A-204ENST00000452906 Q5VV11 94 aa9.39□□□□□ -0.91
HIGD1A-204ENST00000452906 ADM2Q7Z4H4 148 aa9.29□□□□□ -0.92
HIGD1A-204ENST00000452906 UQCR11O14957 56 aa9.28□□□□□ -0.92
HIGD1A-204ENST00000452906 A6NED7 52 aa9.27□□□□□ -0.93
HIGD1A-204ENST00000452906 A0A1B0GU33 70 aa9.26□□□□□ -0.93
HIGD1A-204ENST00000452906 KRTAP9-8Q9BYQ0 159 aa9.25□□□□□ -0.93
HIGD1A-204ENST00000452906 KRTAP3-2Q9BYR7 98 aa9.24□□□□□ -0.93
HIGD1A-204ENST00000452906 P0C880 135 aa9.16□□□□□ -0.94
HIGD1A-204ENST00000452906 MIR22HGQ0VDD5 57 aa9.13□□□□□ -0.95
HIGD1A-204ENST00000452906 CDC42SE1Q9NRR8 79 aa9.11□□□□□ -0.95
HIGD1A-204ENST00000452906 USH2AO75445 5202 aa9.1□□□□□ -0.95
HIGD1A-204ENST00000452906 M0QZ58 72 aa9.1□□□□□ -0.95
HIGD1A-204ENST00000452906 MT2AP02795 61 aa9.1□□□□□ -0.95
HIGD1A-204ENST00000452906 SPATA8Q6RVD6 105 aa9.09□□□□□ -0.95
HIGD1A-204ENST00000452906 BRK1Q8WUW1 75 aa9.09□□□□□ -0.95
HIGD1A-204ENST00000452906 CRIPTQ9P021 101 aa9.08□□□□□ -0.96
HIGD1A-204ENST00000452906 SSPOA2VEC9 5147 aa9.05□□□□□ -0.96
HIGD1A-204ENST00000452906 R4GN34 69 aa9.04□□□□□ -0.96
HIGD1A-204ENST00000452906 MT1FP04733 61 aa9.02□□□□□ -0.97
HIGD1A-204ENST00000452906 KRTAP10-10P60014 251 aa9.02□□□□□ -0.97
HIGD1A-204ENST00000452906 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.99□□□□□ -0.97
HIGD1A-204ENST00000452906 KRTAP9-3Q9BYQ3 159 aa8.96□□□□□ -0.98
HIGD1A-204ENST00000452906 LCE2BO14633 110 aa8.94□□□□□ -0.98
HIGD1A-204ENST00000452906 KRTAP13-4Q3LI77 160 aa8.93□□□□□ -0.98
HIGD1A-204ENST00000452906 KRTAP9-7A8MTY7 169 aa8.92□□□□□ -0.98
HIGD1A-204ENST00000452906 PRO0628Q9UI54 55 aa8.91□□□□□ -0.98
HIGD1A-204ENST00000452906 FCGBPQ9Y6R7 5405 aaPredicted RBP8.89□□□□□ -0.99
HIGD1A-204ENST00000452906 K7ERS5 55 aa8.87□□□□□ -0.99
HIGD1A-204ENST00000452906 KRTAP19-1Q8IUB9 90 aa8.86□□□□□ -0.99
HIGD1A-204ENST00000452906 A8MU10 97 aa8.83□□□□□ -1
HIGD1A-204ENST00000452906 A0A0D9SG42 100 aa8.82□□□□□ -1
HIGD1A-204ENST00000452906 LINC01554Q52M75 96 aa8.78□□□□□ -1
HIGD1A-204ENST00000452906 A6NN06 94 aa8.76□□□□□ -1.01
HIGD1A-204ENST00000452906 SPRR2GQ9BYE4 73 aa8.76□□□□□ -1.01
HIGD1A-204ENST00000452906 KRTAP19-6Q3LI70 58 aa8.69□□□□□ -1.02
HIGD1A-204ENST00000452906 SPINT4Q6UDR6 99 aa8.67□□□□□ -1.02
HIGD1A-204ENST00000452906 KRTAP12-1P59990 96 aa8.66□□□□□ -1.02
HIGD1A-204ENST00000452906 MACF1Q9UPN3 7388 aaKnown RBP8.63□□□□□ -1.03
HIGD1A-204ENST00000452906 PMAIP1Q13794 54 aa8.61□□□□□ -1.03
HIGD1A-204ENST00000452906 SYNE2Q8WXH0 6885 aaKnown RBP8.6□□□□□ -1.03
HIGD1A-204ENST00000452906 KRTAP12-2P59991 146 aa8.6□□□□□ -1.03
HIGD1A-204ENST00000452906 PLAC4Q8WY50 150 aa8.55□□□□□ -1.04
HIGD1A-204ENST00000452906 KRTAP19-8Q3LI54 63 aa8.54□□□□□ -1.04
HIGD1A-204ENST00000452906 CAMK2N1Q7Z7J9 78 aa8.48□□□□□ -1.05
HIGD1A-204ENST00000452906 ROMO1P60602 79 aa8.37□□□□□ -1.07
HIGD1A-204ENST00000452906 KRTAP6-3Q3LI67 103 aa8.37□□□□□ -1.07
HIGD1A-204ENST00000452906 MT1BP07438 61 aa8.35□□□□□ -1.07
HIGD1A-204ENST00000452906 KTN1-AS1Q86SY8 53 aa8.27□□□□□ -1.09
HIGD1A-204ENST00000452906 PRO2289Q9P1D8 64 aa8.2□□□□□ -1.1
HIGD1A-204ENST00000452906 C10orf95Q9H7T3 257 aa8.17□□□□□ -1.1
HIGD1A-204ENST00000452906 NEBP20929 6669 aa8.13□□□□□ -1.11
HIGD1A-204ENST00000452906 KRTAP10-5P60370 271 aa8.11□□□□□ -1.11
HIGD1A-204ENST00000452906 KRTAP25-1Q3LHN0 102 aa8.11□□□□□ -1.11
HIGD1A-204ENST00000452906 TNP1P09430 55 aa8.07□□□□□ -1.12
HIGD1A-204ENST00000452906 MT1XP80297 61 aa8.07□□□□□ -1.12
HIGD1A-204ENST00000452906 MUC12Q9UKN1 5478 aa8.01□□□□□ -1.13
HIGD1A-204ENST00000452906 SVIPQ8NHG7 77 aa7.96□□□□□ -1.14
HIGD1A-204ENST00000452906 PRAC1Q96KF2 57 aa7.95□□□□□ -1.14
HIGD1A-204ENST00000452906 KRTAP5-9P26371 169 aa7.93□□□□□ -1.14
HIGD1A-204ENST00000452906 PP632Q6XCG6 107 aa7.88□□□□□ -1.15
HIGD1A-204ENST00000452906 KRTAP23-1A1A580 65 aa7.87□□□□□ -1.15
HIGD1A-204ENST00000452906 KMT2DO14686 5537 aa7.83□□□□□ -1.16
HIGD1A-204ENST00000452906 KRTAP20-1Q3LI63 56 aa7.81□□□□□ -1.16
HIGD1A-204ENST00000452906 MDN1Q9NU22 5596 aa7.78□□□□□ -1.16
HIGD1A-204ENST00000452906 KRTAP10-12P60413 245 aa7.74□□□□□ -1.17
HIGD1A-204ENST00000452906 KRTAP10-7P60409 375 aaPredicted RBP7.7□□□□□ -1.18
HIGD1A-204ENST00000452906 SPRR2FQ96RM1 72 aa7.63□□□□□ -1.19
HIGD1A-204ENST00000452906 LCE3AQ5TA76 89 aa7.61□□□□□ -1.19
HIGD1A-204ENST00000452906 KRTAP2-3P0C7H8 128 aa7.58□□□□□ -1.2
HIGD1A-204ENST00000452906 KRTAP2-4Q9BYR9 128 aa7.58□□□□□ -1.2
HIGD1A-204ENST00000452906 SPRR2EP22531 72 aa7.56□□□□□ -1.2
HIGD1A-204ENST00000452906 SPRR2BP35325 72 aa7.56□□□□□ -1.2
HIGD1A-204ENST00000452906 SPRR2AP35326 72 aa7.56□□□□□ -1.2
HIGD1A-204ENST00000452906 KRTAP8-1Q8IUC2 63 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms