RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 CHKB-CPT1BH3BT56 60 aa5.83□□□□□ -1.48
PKP4-206ENST00000452162 LINC01554Q52M75 96 aa5.83□□□□□ -1.48
PKP4-206ENST00000452162 C20orf166-AS1Q96NR2 134 aa5.82□□□□□ -1.48
PKP4-206ENST00000452162 C9orf92A6NGG3 77 aa5.82□□□□□ -1.48
PKP4-206ENST00000452162 A8MUU9 505 aa5.82□□□□□ -1.48
PKP4-206ENST00000452162 ACYP2P14621 99 aa5.81□□□□□ -1.48
PKP4-206ENST00000452162 PRR15LQ9BU68 103 aa5.77□□□□□ -1.49
PKP4-206ENST00000452162 LINC01558Q9Y6Z2 57 aa5.77□□□□□ -1.49
PKP4-206ENST00000452162 A0A0A0MQY5 61 aa5.76□□□□□ -1.49
PKP4-206ENST00000452162 CDC42SE1Q9NRR8 79 aa5.74□□□□□ -1.49
PKP4-206ENST00000452162 A6NED7 52 aa5.74□□□□□ -1.49
PKP4-206ENST00000452162 Q75L30 129 aa5.74□□□□□ -1.49
PKP4-206ENST00000452162 TPRXLQ17RH7 258 aa5.73□□□□□ -1.49
PKP4-206ENST00000452162 PRAC1Q96KF2 57 aa5.73□□□□□ -1.49
PKP4-206ENST00000452162 RNF213Q63HN8 5207 aa5.69□□□□□ -1.5
PKP4-206ENST00000452162 SPINK7P58062 85 aa5.66□□□□□ -1.5
PKP4-206ENST00000452162 MUC17Q685J3 4493 aa5.65□□□□□ -1.5
PKP4-206ENST00000452162 ADM2Q7Z4H4 148 aa5.64□□□□□ -1.51
PKP4-206ENST00000452162 MUC2Q02817 5179 aa5.63□□□□□ -1.51
PKP4-206ENST00000452162 RPL37P61927 97 aaKnown RBP5.62□□□□□ -1.51
PKP4-206ENST00000452162 KRTAP3-1Q9BYR8 98 aa5.62□□□□□ -1.51
PKP4-206ENST00000452162 XP32Q5T750 250 aa5.62□□□□□ -1.51
PKP4-206ENST00000452162 A0A1B0GU69 56 aa5.58□□□□□ -1.52
PKP4-206ENST00000452162 COX6B2Q6YFQ2 88 aa5.56□□□□□ -1.52
PKP4-206ENST00000452162 SEC61BP60468 96 aaKnown RBP5.53□□□□□ -1.52
PKP4-206ENST00000452162 KRTAP4-1Q9BYQ7 146 aa5.51□□□□□ -1.53
PKP4-206ENST00000452162 LCE2BO14633 110 aa5.5□□□□□ -1.53
PKP4-206ENST00000452162 FAT4Q6V0I7 4981 aa5.47□□□□□ -1.53
PKP4-206ENST00000452162 CSAG1Q6PB30 78 aa5.47□□□□□ -1.53
PKP4-206ENST00000452162 SPATA8Q6RVD6 105 aa5.45□□□□□ -1.54
PKP4-206ENST00000452162 UQCR11O14957 56 aa5.45□□□□□ -1.54
PKP4-206ENST00000452162 ROMO1P60602 79 aa5.43□□□□□ -1.54
PKP4-206ENST00000452162 MIR22HGQ0VDD5 57 aa5.42□□□□□ -1.54
PKP4-206ENST00000452162 S4R3F8 94 aa5.37□□□□□ -1.55
PKP4-206ENST00000452162 H1FX-AS1Q4G0G2 97 aa5.35□□□□□ -1.55
PKP4-206ENST00000452162 KRTAP19-2Q3LHN2 52 aa5.34□□□□□ -1.55
PKP4-206ENST00000452162 A0A1B0GU33 70 aa5.34□□□□□ -1.56
PKP4-206ENST00000452162 H0YAA0 97 aa5.34□□□□□ -1.56
PKP4-206ENST00000452162 P0C880 135 aa5.32□□□□□ -1.56
PKP4-206ENST00000452162 LCE2AQ5TA79 106 aaPredicted RBP5.32□□□□□ -1.56
PKP4-206ENST00000452162 LCE2CQ5TA81 110 aa5.32□□□□□ -1.56
PKP4-206ENST00000452162 KRTAP10-6P60371 365 aaPredicted RBP5.29□□□□□ -1.56
PKP4-206ENST00000452162 FLGP20930 4061 aaPredicted RBP5.24□□□□□ -1.57
PKP4-206ENST00000452162 MT1HP80294 61 aa5.23□□□□□ -1.57
PKP4-206ENST00000452162 KRTAP25-1Q3LHN0 102 aa5.22□□□□□ -1.57
PKP4-206ENST00000452162 KRTAP13-4Q3LI77 160 aa5.19□□□□□ -1.58
PKP4-206ENST00000452162 M0R2T5 61 aa5.14□□□□□ -1.59
PKP4-206ENST00000452162 NDUFAF8A1L188 74 aa5.12□□□□□ -1.59
PKP4-206ENST00000452162 LORP23490 312 aaPredicted RBP5.1□□□□□ -1.59
PKP4-206ENST00000452162 K7ERS5 55 aa5.09□□□□□ -1.59
PKP4-206ENST00000452162 A0A0D9SG42 100 aa5.08□□□□□ -1.6
PKP4-206ENST00000452162 LUZP6Q538Z0 58 aa5.06□□□□□ -1.6
PKP4-206ENST00000452162 M0QZ58 72 aa5.05□□□□□ -1.6
PKP4-206ENST00000452162 KRTAP9-2Q9BYQ4 174 aa5.01□□□□□ -1.61
PKP4-206ENST00000452162 KRTAP12-2P59991 146 aa5□□□□□ -1.61
PKP4-206ENST00000452162 KRTAP12-1P59990 96 aa4.99□□□□□ -1.61
PKP4-206ENST00000452162 KRTAP9-8Q9BYQ0 159 aa4.98□□□□□ -1.61
PKP4-206ENST00000452162 KRTAP15-1Q3LI76 137 aa4.96□□□□□ -1.62
PKP4-206ENST00000452162 SPINT4Q6UDR6 99 aa4.96□□□□□ -1.62
PKP4-206ENST00000452162 R4GN34 69 aa4.94□□□□□ -1.62
PKP4-206ENST00000452162 CRIPTQ9P021 101 aa4.94□□□□□ -1.62
PKP4-206ENST00000452162 MT2AP02795 61 aa4.93□□□□□ -1.62
PKP4-206ENST00000452162 MT1FP04733 61 aa4.9□□□□□ -1.63
PKP4-206ENST00000452162 KRTAP10-10P60014 251 aa4.86□□□□□ -1.63
PKP4-206ENST00000452162 FSIP2Q5CZC0 6907 aa4.84□□□□□ -1.63
PKP4-206ENST00000452162 KRTAP9-3Q9BYQ3 159 aa4.82□□□□□ -1.64
PKP4-206ENST00000452162 KRTAP9-6A0A140TA67 174 aa4.77□□□□□ -1.65
PKP4-206ENST00000452162 CRCT1Q9UGL9 99 aa4.77□□□□□ -1.65
PKP4-206ENST00000452162 USH2AO75445 5202 aa4.76□□□□□ -1.65
PKP4-206ENST00000452162 C10orf95Q9H7T3 257 aa4.75□□□□□ -1.65
PKP4-206ENST00000452162 SSPOA2VEC9 5147 aa4.71□□□□□ -1.66
PKP4-206ENST00000452162 SPRR2GQ9BYE4 73 aa4.67□□□□□ -1.66
PKP4-206ENST00000452162 CAMK2N1Q7Z7J9 78 aa4.66□□□□□ -1.66
PKP4-206ENST00000452162 KRTAP19-1Q8IUB9 90 aa4.65□□□□□ -1.66
PKP4-206ENST00000452162 KRTAP23-1A1A580 65 aa4.6□□□□□ -1.67
PKP4-206ENST00000452162 KRTAP19-8Q3LI54 63 aa4.55□□□□□ -1.68
PKP4-206ENST00000452162 FCGBPQ9Y6R7 5405 aaPredicted RBP4.54□□□□□ -1.68
PKP4-206ENST00000452162 MT1BP07438 61 aa4.54□□□□□ -1.68
PKP4-206ENST00000452162 KRTAP19-6Q3LI70 58 aa4.54□□□□□ -1.68
PKP4-206ENST00000452162 PLAC4Q8WY50 150 aa4.54□□□□□ -1.68
PKP4-206ENST00000452162 PP632Q6XCG6 107 aa4.48□□□□□ -1.69
PKP4-206ENST00000452162 TNP1P09430 55 aa4.48□□□□□ -1.69
PKP4-206ENST00000452162 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.43□□□□□ -1.7
PKP4-206ENST00000452162 KRTAP10-5P60370 271 aa4.39□□□□□ -1.71
PKP4-206ENST00000452162 MACF1Q9UPN3 7388 aaKnown RBP4.37□□□□□ -1.71
PKP4-206ENST00000452162 MT1XP80297 61 aa4.36□□□□□ -1.71
PKP4-206ENST00000452162 PRO2289Q9P1D8 64 aa4.34□□□□□ -1.72
PKP4-206ENST00000452162 KRTAP9-7A8MTY7 169 aa4.32□□□□□ -1.72
PKP4-206ENST00000452162 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
PKP4-206ENST00000452162 SYNE2Q8WXH0 6885 aaKnown RBP4.28□□□□□ -1.72
PKP4-206ENST00000452162 KRTAP10-7P60409 375 aaPredicted RBP4.2□□□□□ -1.74
PKP4-206ENST00000452162 KRTAP8-1Q8IUC2 63 aa4.2□□□□□ -1.74
PKP4-206ENST00000452162 KRTAP10-12P60413 245 aa4.19□□□□□ -1.74
PKP4-206ENST00000452162 KRTAP6-3Q3LI67 103 aa4.19□□□□□ -1.74
PKP4-206ENST00000452162 KMT2DO14686 5537 aa4.18□□□□□ -1.74
PKP4-206ENST00000452162 LOC100996750A0A140TA64 210 aa4.13□□□□□ -1.75
PKP4-206ENST00000452162 SPRR5A0A1B0GTR4 108 aa4.13□□□□□ -1.75
PKP4-206ENST00000452162 KRTAP4-6Q9BYQ5 205 aa4.13□□□□□ -1.75
PKP4-206ENST00000452162 MUC12Q9UKN1 5478 aa4.09□□□□□ -1.75
PKP4-206ENST00000452162 KRTAP12-3P60328 96 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms