RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 FLGP20930 4061 aaPredicted RBP8.77□□□□□ -1
PRPF40A-204ENST00000450303 IGKV2-30P06310 120 aa8.76□□□□□ -1.01
PRPF40A-204ENST00000450303 C4orf26Q17RF5 130 aa8.74□□□□□ -1.01
PRPF40A-204ENST00000450303 MPLKIPQ8TAP9 179 aa8.74□□□□□ -1.01
PRPF40A-204ENST00000450303 COA5Q86WW8 74 aa8.73□□□□□ -1.01
PRPF40A-204ENST00000450303 FSIP2Q5CZC0 6907 aa8.73□□□□□ -1.01
PRPF40A-204ENST00000450303 SPINK7P58062 85 aa8.72□□□□□ -1.01
PRPF40A-204ENST00000450303 Q1T7F1 81 aa8.71□□□□□ -1.02
PRPF40A-204ENST00000450303 C7orf65Q6ZTY9 151 aa8.71□□□□□ -1.02
PRPF40A-204ENST00000450303 IGKV2D-30A0A075B6S6 120 aa8.7□□□□□ -1.02
PRPF40A-204ENST00000450303 CRCT1Q9UGL9 99 aa8.7□□□□□ -1.02
PRPF40A-204ENST00000450303 ACYP2P14621 99 aa8.68□□□□□ -1.02
PRPF40A-204ENST00000450303 HRES1P13985 223 aa8.67□□□□□ -1.02
PRPF40A-204ENST00000450303 DMAC1Q96GE9 116 aa8.62□□□□□ -1.03
PRPF40A-204ENST00000450303 RBM12B-AS1Q9P1G2 102 aa8.61□□□□□ -1.03
PRPF40A-204ENST00000450303 CHKB-CPT1BH3BT56 60 aa8.6□□□□□ -1.03
PRPF40A-204ENST00000450303 A8MUN3 132 aa8.52□□□□□ -1.05
PRPF40A-204ENST00000450303 PSPHP1O15172 72 aa8.51□□□□□ -1.05
PRPF40A-204ENST00000450303 PRR15LQ9BU68 103 aa8.5□□□□□ -1.05
PRPF40A-204ENST00000450303 KRTAP9-8Q9BYQ0 159 aa8.5□□□□□ -1.05
PRPF40A-204ENST00000450303 LINC01558Q9Y6Z2 57 aa8.49□□□□□ -1.05
PRPF40A-204ENST00000450303 BRK1Q8WUW1 75 aa8.44□□□□□ -1.06
PRPF40A-204ENST00000450303 SVIPQ8NHG7 77 aa8.43□□□□□ -1.06
PRPF40A-204ENST00000450303 SPTSSBQ8NFR3 76 aa8.42□□□□□ -1.06
PRPF40A-204ENST00000450303 PRO0628Q9UI54 55 aa8.42□□□□□ -1.06
PRPF40A-204ENST00000450303 Q5VV11 94 aa8.41□□□□□ -1.06
PRPF40A-204ENST00000450303 MT2AP02795 61 aa8.39□□□□□ -1.07
PRPF40A-204ENST00000450303 H1FX-AS1Q4G0G2 97 aa8.37□□□□□ -1.07
PRPF40A-204ENST00000450303 MT1FP04733 61 aa8.33□□□□□ -1.08
PRPF40A-204ENST00000450303 A6NED7 52 aa8.32□□□□□ -1.08
PRPF40A-204ENST00000450303 USH2AO75445 5202 aa8.31□□□□□ -1.08
PRPF40A-204ENST00000450303 A0A1B0GU69 56 aa8.3□□□□□ -1.08
PRPF40A-204ENST00000450303 KRTAP10-10P60014 251 aa8.29□□□□□ -1.08
PRPF40A-204ENST00000450303 KRTAP3-1Q9BYR8 98 aa8.29□□□□□ -1.08
PRPF40A-204ENST00000450303 SEC61GP60059 68 aa8.26□□□□□ -1.09
PRPF40A-204ENST00000450303 SSPOA2VEC9 5147 aa8.24□□□□□ -1.09
PRPF40A-204ENST00000450303 KRTAP9-3Q9BYQ3 159 aa8.23□□□□□ -1.09
PRPF40A-204ENST00000450303 S4R3F8 94 aa8.23□□□□□ -1.09
PRPF40A-204ENST00000450303 CDC42SE1Q9NRR8 79 aa8.19□□□□□ -1.1
PRPF40A-204ENST00000450303 LCA10Q71F78 164 aa8.13□□□□□ -1.11
PRPF40A-204ENST00000450303 UQCR11O14957 56 aa8.11□□□□□ -1.11
PRPF40A-204ENST00000450303 CSAG1Q6PB30 78 aa8.11□□□□□ -1.11
PRPF40A-204ENST00000450303 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.1□□□□□ -1.11
PRPF40A-204ENST00000450303 KRTAP19-1Q8IUB9 90 aa8.1□□□□□ -1.11
PRPF40A-204ENST00000450303 FCGBPQ9Y6R7 5405 aaPredicted RBP8.05□□□□□ -1.12
PRPF40A-204ENST00000450303 MIR22HGQ0VDD5 57 aa8.04□□□□□ -1.12
PRPF40A-204ENST00000450303 SPATA8Q6RVD6 105 aa8.02□□□□□ -1.13
PRPF40A-204ENST00000450303 KRTAP9-7A8MTY7 169 aa8.01□□□□□ -1.13
PRPF40A-204ENST00000450303 PMAIP1Q13794 54 aa8.01□□□□□ -1.13
PRPF40A-204ENST00000450303 A8MU10 97 aa7.98□□□□□ -1.13
PRPF40A-204ENST00000450303 A0A1B0GU33 70 aa7.93□□□□□ -1.14
PRPF40A-204ENST00000450303 KRTAP19-6Q3LI70 58 aa7.9□□□□□ -1.14
PRPF40A-204ENST00000450303 H0YAA0 97 aa7.86□□□□□ -1.15
PRPF40A-204ENST00000450303 A6NN06 94 aa7.85□□□□□ -1.15
PRPF40A-204ENST00000450303 MACF1Q9UPN3 7388 aaKnown RBP7.8□□□□□ -1.16
PRPF40A-204ENST00000450303 ADM2Q7Z4H4 148 aa7.79□□□□□ -1.16
PRPF40A-204ENST00000450303 KTN1-AS1Q86SY8 53 aa7.77□□□□□ -1.17
PRPF40A-204ENST00000450303 SYNE2Q8WXH0 6885 aaKnown RBP7.76□□□□□ -1.17
PRPF40A-204ENST00000450303 K7ERS5 55 aa7.75□□□□□ -1.17
PRPF40A-204ENST00000450303 LOC100996750A0A140TA64 210 aa7.7□□□□□ -1.18
PRPF40A-204ENST00000450303 KRTAP4-6Q9BYQ5 205 aa7.7□□□□□ -1.18
PRPF40A-204ENST00000450303 CRIPTQ9P021 101 aa7.69□□□□□ -1.18
PRPF40A-204ENST00000450303 P0C880 135 aa7.64□□□□□ -1.19
PRPF40A-204ENST00000450303 MT1BP07438 61 aa7.62□□□□□ -1.19
PRPF40A-204ENST00000450303 SPRR2GQ9BYE4 73 aa7.6□□□□□ -1.19
PRPF40A-204ENST00000450303 KRTAP19-8Q3LI54 63 aa7.58□□□□□ -1.2
PRPF40A-204ENST00000450303 R4GN34 69 aa7.58□□□□□ -1.2
PRPF40A-204ENST00000450303 M0QZ58 72 aa7.57□□□□□ -1.2
PRPF40A-204ENST00000450303 KRTAP6-3Q3LI67 103 aa7.54□□□□□ -1.2
PRPF40A-204ENST00000450303 A0A0D9SG42 100 aa7.52□□□□□ -1.21
PRPF40A-204ENST00000450303 KRTAP13-4Q3LI77 160 aa7.5□□□□□ -1.21
PRPF40A-204ENST00000450303 KRTAP10-5P60370 271 aa7.44□□□□□ -1.22
PRPF40A-204ENST00000450303 LINC01554Q52M75 96 aa7.38□□□□□ -1.23
PRPF40A-204ENST00000450303 PRAC1Q96KF2 57 aa7.38□□□□□ -1.23
PRPF40A-204ENST00000450303 ROMO1P60602 79 aa7.36□□□□□ -1.23
PRPF40A-204ENST00000450303 SPINT4Q6UDR6 99 aa7.35□□□□□ -1.23
PRPF40A-204ENST00000450303 KRTAP12-1P59990 96 aa7.31□□□□□ -1.24
PRPF40A-204ENST00000450303 PLAC4Q8WY50 150 aa7.3□□□□□ -1.24
PRPF40A-204ENST00000450303 KRTAP12-2P59991 146 aa7.28□□□□□ -1.24
PRPF40A-204ENST00000450303 NEBP20929 6669 aa7.27□□□□□ -1.25
PRPF40A-204ENST00000450303 MUC12Q9UKN1 5478 aa7.21□□□□□ -1.25
PRPF40A-204ENST00000450303 KRTAP25-1Q3LHN0 102 aa7.2□□□□□ -1.26
PRPF40A-204ENST00000450303 KRTAP4-8Q9BYQ9 185 aa7.18□□□□□ -1.26
PRPF40A-204ENST00000450303 KRTAP5-9P26371 169 aa7.16□□□□□ -1.26
PRPF40A-204ENST00000450303 MT1XP80297 61 aa7.13□□□□□ -1.27
PRPF40A-204ENST00000450303 PRO2289Q9P1D8 64 aa7.11□□□□□ -1.27
PRPF40A-204ENST00000450303 KMT2DO14686 5537 aa7.08□□□□□ -1.28
PRPF40A-204ENST00000450303 CAMK2N1Q7Z7J9 78 aa7.07□□□□□ -1.28
PRPF40A-204ENST00000450303 KRTAP20-1Q3LI63 56 aa7.02□□□□□ -1.29
PRPF40A-204ENST00000450303 H3BS24 57 aa7.01□□□□□ -1.29
PRPF40A-204ENST00000450303 MDN1Q9NU22 5596 aa7.01□□□□□ -1.29
PRPF40A-204ENST00000450303 SPRR2FQ96RM1 72 aa6.99□□□□□ -1.29
PRPF40A-204ENST00000450303 KRTAP4-12Q9BQ66 201 aa6.98□□□□□ -1.29
PRPF40A-204ENST00000450303 KRTAP8-1Q8IUC2 63 aa6.94□□□□□ -1.3
PRPF40A-204ENST00000450303 SPRR2EP22531 72 aa6.9□□□□□ -1.3
PRPF40A-204ENST00000450303 SPRR2BP35325 72 aa6.9□□□□□ -1.3
PRPF40A-204ENST00000450303 SPRR2AP35326 72 aa6.9□□□□□ -1.3
PRPF40A-204ENST00000450303 KRTAP4-8A0A0G2JLE6 195 aa6.88□□□□□ -1.31
PRPF40A-204ENST00000450303 C10orf95Q9H7T3 257 aa6.88□□□□□ -1.31
PRPF40A-204ENST00000450303 KRTAP10-7P60409 375 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms