RNA–Protein interactions for RNA: ENST00000449491.1

USP25-205, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 5

Gene USP25, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-205ENST00000449491 NOTCH1P46531 2555 aa0.82□□□□□ -2.28
USP25-205ENST00000449491 HTTP42858 3142 aa0.82□□□□□ -2.28
USP25-205ENST00000449491 SONP18583 2426 aaKnown RBP0.81□□□□□ -2.28
USP25-205ENST00000449491 SPG11Q96JI7 2443 aa0.81□□□□□ -2.28
USP25-205ENST00000449491 CELSR3Q9NYQ7 3312 aa0.81□□□□□ -2.28
USP25-205ENST00000449491 MKI67P46013 3256 aaKnown RBP0.81□□□□□ -2.28
USP25-205ENST00000449491 APCP25054 2843 aa0.81□□□□□ -2.28
USP25-205ENST00000449491 COL7A1Q02388 2944 aa0.81□□□□□ -2.28
USP25-205ENST00000449491 SMG1Q96Q15 3661 aaKnown RBP0.8□□□□□ -2.28
USP25-205ENST00000449491 FRYQ5TBA9 3013 aa0.8□□□□□ -2.28
USP25-205ENST00000449491 KMT2AQ03164 3969 aa0.8□□□□□ -2.28
USP25-205ENST00000449491 SPEGQ15772 3267 aa0.8□□□□□ -2.28
USP25-205ENST00000449491 TENM3Q9P273 2699 aa0.8□□□□□ -2.28
USP25-205ENST00000449491 USP34Q70CQ2 3546 aa0.8□□□□□ -2.28
USP25-205ENST00000449491 ANK3Q12955 4377 aaKnown RBP0.79□□□□□ -2.28
USP25-205ENST00000449491 DNAH12Q6ZR08 3092 aa0.79□□□□□ -2.28
USP25-205ENST00000449491 LAMA5O15230 3695 aa0.79□□□□□ -2.28
USP25-205ENST00000449491 DYNC2H1Q8NCM8 4307 aaKnown RBP0.79□□□□□ -2.28
USP25-205ENST00000449491 WDFY4Q6ZS81 3184 aa0.79□□□□□ -2.28
USP25-205ENST00000449491 TGP01266 2768 aa0.79□□□□□ -2.28
USP25-205ENST00000449491 ACANP16112 2415 aa0.78□□□□□ -2.28
USP25-205ENST00000449491 CFAP47Q6ZTR5 3102 aa0.78□□□□□ -2.28
USP25-205ENST00000449491 DNAH10Q8IVF4 4471 aa0.78□□□□□ -2.28
USP25-205ENST00000449491 DMXL1Q9Y485 3027 aa0.78□□□□□ -2.28
USP25-205ENST00000449491 ATMQ13315 3056 aa0.78□□□□□ -2.28
USP25-205ENST00000449491 COL12A1Q99715 3063 aa0.78□□□□□ -2.28
USP25-205ENST00000449491 C5orf42Q9H799 3197 aa0.78□□□□□ -2.28
USP25-205ENST00000449491 FLNCQ14315 2725 aa0.78□□□□□ -2.29
USP25-205ENST00000449491 CFAP46Q8IYW2 2715 aa0.78□□□□□ -2.29
USP25-205ENST00000449491 DNAH3Q8TD57 4116 aa0.78□□□□□ -2.29
USP25-205ENST00000449491 CSMD1Q96PZ7 3565 aa0.77□□□□□ -2.29
USP25-205ENST00000449491 ZFYVE26Q68DK2 2539 aa0.77□□□□□ -2.29
USP25-205ENST00000449491 CENPEQ02224 2701 aa0.77□□□□□ -2.29
USP25-205ENST00000449491 STAB1Q9NY15 2570 aa0.77□□□□□ -2.29
USP25-205ENST00000449491 SETXQ7Z333 2677 aaKnown RBP0.77□□□□□ -2.29
USP25-205ENST00000449491 UTP20O75691 2785 aaKnown RBP0.77□□□□□ -2.29
USP25-205ENST00000449491 DCHS2Q6V1P9 2916 aa0.77□□□□□ -2.29
USP25-205ENST00000449491 DCHS1Q96JQ0 3298 aa0.77□□□□□ -2.29
USP25-205ENST00000449491 DNAH9Q9NYC9 4486 aa0.76□□□□□ -2.29
USP25-205ENST00000449491 DMXL2Q8TDJ6 3036 aa0.76□□□□□ -2.29
USP25-205ENST00000449491 GCN1Q92616 2671 aaKnown RBP0.76□□□□□ -2.29
USP25-205ENST00000449491 NSD1Q96L73 2696 aaPredicted RBP0.76□□□□□ -2.29
USP25-205ENST00000449491 HSPG2P98160 4391 aa0.76□□□□□ -2.29
USP25-205ENST00000449491 PKHD1L1Q86WI1 4243 aa0.76□□□□□ -2.29
USP25-205ENST00000449491 CENPFP49454 3210 aa0.76□□□□□ -2.29
USP25-205ENST00000449491 KALRNO60229 2985 aa0.76□□□□□ -2.29
USP25-205ENST00000449491 DNAH1Q9P2D7 4330 aa0.76□□□□□ -2.29
USP25-205ENST00000449491 TLN1Q9Y490 2541 aaKnown RBP0.76□□□□□ -2.29
USP25-205ENST00000449491 XIRP2A4UGR9 3374 aa0.76□□□□□ -2.29
USP25-205ENST00000449491 FREM2Q5SZK8 3169 aa0.75□□□□□ -2.29
USP25-205ENST00000449491 DSTQ03001 7570 aaKnown RBP0.75□□□□□ -2.29
USP25-205ENST00000449491 ASPMQ8IZT6 3477 aa0.75□□□□□ -2.29
USP25-205ENST00000449491 PCNTO95613 3336 aa0.75□□□□□ -2.29
USP25-205ENST00000449491 EP400Q96L91 3159 aa0.75□□□□□ -2.29
USP25-205ENST00000449491 PKD1L1Q8TDX9 2849 aa0.75□□□□□ -2.29
USP25-205ENST00000449491 MTORP42345 2549 aa0.74□□□□□ -2.29
USP25-205ENST00000449491 SYNE2Q8WXH0 6885 aaKnown RBP0.74□□□□□ -2.29
USP25-205ENST00000449491 LPAP08519 4548 aa0.74□□□□□ -2.29
USP25-205ENST00000449491 APOBP04114 4563 aaKnown RBP0.74□□□□□ -2.29
USP25-205ENST00000449491 USP9XQ93008 2570 aaPredicted RBP0.74□□□□□ -2.29
USP25-205ENST00000449491 TRRAPQ9Y4A5 3859 aa0.74□□□□□ -2.29
USP25-205ENST00000449491 LAMA3Q16787 3333 aa0.74□□□□□ -2.29
USP25-205ENST00000449491 ITPR2Q14571 2701 aa0.73□□□□□ -2.29
USP25-205ENST00000449491 TEX15Q9BXT5 2789 aa0.73□□□□□ -2.29
USP25-205ENST00000449491 SMR3BP02814 79 aaPredicted RBP0.73□□□□□ -2.29
USP25-205ENST00000449491 LAMA1P25391 3075 aa0.73□□□□□ -2.29
USP25-205ENST00000449491 TACC2O95359 2948 aa0.73□□□□□ -2.29
USP25-205ENST00000449491 SVEP1Q4LDE5 3571 aa0.73□□□□□ -2.29
USP25-205ENST00000449491 LOC400499M0QZD8 3231 aa0.73□□□□□ -2.29
USP25-205ENST00000449491 DNAH7Q8WXX0 4024 aa0.73□□□□□ -2.29
USP25-205ENST00000449491 MUC3AQ02505 3323 aa0.72□□□□□ -2.29
USP25-205ENST00000449491 CMYA5Q8N3K9 4069 aa0.72□□□□□ -2.29
USP25-205ENST00000449491 DOPEY1Q5JWR5 2465 aa0.72□□□□□ -2.29
USP25-205ENST00000449491 SPRR2DP22532 72 aa0.72□□□□□ -2.29
USP25-205ENST00000449491 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
USP25-205ENST00000449491 LRP1Q07954 4544 aaKnown RBP0.72□□□□□ -2.29
USP25-205ENST00000449491 DNAH17Q9UFH2 4485 aa0.72□□□□□ -2.29
USP25-205ENST00000449491 NBEAL1Q6ZS30 2694 aa0.71□□□□□ -2.29
USP25-205ENST00000449491 ZANQ9Y493 2812 aa0.71□□□□□ -2.3
USP25-205ENST00000449491 HIVEP1P15822 2718 aa0.71□□□□□ -2.3
USP25-205ENST00000449491 CUBNO60494 3623 aa0.71□□□□□ -2.3
USP25-205ENST00000449491 FLGP20930 4061 aaPredicted RBP0.71□□□□□ -2.3
USP25-205ENST00000449491 TEP1Q99973 2627 aaKnown RBP0.71□□□□□ -2.3
USP25-205ENST00000449491 MUC5ACP98088 5654 aa0.71□□□□□ -2.3
USP25-205ENST00000449491 FSIP2Q5CZC0 6907 aa0.71□□□□□ -2.3
USP25-205ENST00000449491 MXRA5Q9NR99 2828 aa0.7□□□□□ -2.3
USP25-205ENST00000449491 STAB2Q8WWQ8 2551 aa0.7□□□□□ -2.3
USP25-205ENST00000449491 DNAH6Q9C0G6 4158 aa0.7□□□□□ -2.3
USP25-205ENST00000449491 TLN2Q9Y4G6 2542 aa0.7□□□□□ -2.3
USP25-205ENST00000449491 CSMD2Q7Z408 3487 aa0.7□□□□□ -2.3
USP25-205ENST00000449491 NBEAL2Q6ZNJ1 2754 aa0.7□□□□□ -2.3
USP25-205ENST00000449491 NEBP20929 6669 aa0.7□□□□□ -2.3
USP25-205ENST00000449491 UNC80Q8N2C7 3258 aa0.7□□□□□ -2.3
USP25-205ENST00000449491 ANKRD11Q6UB99 2663 aaPredicted RBP0.7□□□□□ -2.3
USP25-205ENST00000449491 ACACBO00763 2458 aa0.7□□□□□ -2.3
USP25-205ENST00000449491 SPTAN1Q13813 2472 aaKnown RBP0.7□□□□□ -2.3
USP25-205ENST00000449491 WDFY3Q8IZQ1 3526 aa0.69□□□□□ -2.3
USP25-205ENST00000449491 MYO15AQ9UKN7 3530 aa0.69□□□□□ -2.3
USP25-205ENST00000449491 FAT3Q8TDW7 4589 aa0.69□□□□□ -2.3
USP25-205ENST00000449491 HECTD4Q9Y4D8 3996 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms