RNA–Protein interactions for RNA: ENST00000449491.1

USP25-205, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 5

Gene USP25, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-205ENST00000449491 AEBP2Q6ZN18 517 aaPredicted RBP27.26■■□□□ 1.95
USP25-205ENST00000449491 CHIC1Q5VXU3 224 aa25.95■■□□□ 1.74
USP25-205ENST00000449491 SENP3Q9H4L4 574 aaPredicted RBP23.06■■□□□ 1.28
USP25-205ENST00000449491 PHF23Q9BUL5 403 aaPredicted RBP22.86■■□□□ 1.25
USP25-205ENST00000449491 FOXD1Q16676 465 aa21.58■■□□□ 1.05
USP25-205ENST00000449491 PLPPR3Q6T4P5 718 aa20.75■□□□□ 0.91
USP25-205ENST00000449491 PPP6R1Q9UPN7 881 aa20.37■□□□□ 0.85
USP25-205ENST00000449491 ADRA2BP18089 450 aa20.26■□□□□ 0.83
USP25-205ENST00000449491 PIAS4Q8N2W9 510 aaPredicted RBP20.11■□□□□ 0.81
USP25-205ENST00000449491 MSH5O43196 834 aa20■□□□□ 0.79
USP25-205ENST00000449491 POTEDQ86YR6 584 aa19.34■□□□□ 0.69
USP25-205ENST00000449491 MAPK8IP2Q13387 824 aaPredicted RBP18.59■□□□□ 0.57
USP25-205ENST00000449491 DMRT2Q9Y5R5 561 aa18.37■□□□□ 0.53
USP25-205ENST00000449491 SCAF1Q9H7N4 1312 aaKnown RBP18.37■□□□□ 0.53
USP25-205ENST00000449491 PPP4R3CPQ6ZMV5 832 aa18.26■□□□□ 0.51
USP25-205ENST00000449491 CNKSR2Q8WXI2 1034 aa17.84■□□□□ 0.45
USP25-205ENST00000449491 HOXD11P31277 338 aaPredicted RBP17.78■□□□□ 0.44
USP25-205ENST00000449491 RNF216Q9NWF9 866 aaPredicted RBP17.64■□□□□ 0.41
USP25-205ENST00000449491 DCAF8L1A6NGE4 600 aa17.5■□□□□ 0.39
USP25-205ENST00000449491 NCBP3Q53F19 620 aaKnown RBP17.49■□□□□ 0.39
USP25-205ENST00000449491 NPM3O75607 178 aaKnown RBP17.38■□□□□ 0.37
USP25-205ENST00000449491 KCNA4P22459 653 aa17.21■□□□□ 0.35
USP25-205ENST00000449491 RNF39Q9H2S5 420 aa17.17■□□□□ 0.34
USP25-205ENST00000449491 DNAJC5BQ9UF47 199 aa17.08■□□□□ 0.32
USP25-205ENST00000449491 CACNB1Q02641 598 aaPredicted RBP17.07■□□□□ 0.32
USP25-205ENST00000449491 C1QBPQ07021 282 aaKnown RBP16.86■□□□□ 0.29
USP25-205ENST00000449491 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.84■□□□□ 0.29
USP25-205ENST00000449491 SLC4A2P04920 1241 aa16.61■□□□□ 0.25
USP25-205ENST00000449491 U3KPZ7 1027 aaPredicted RBP16.61■□□□□ 0.25
USP25-205ENST00000449491 SPINK5Q9NQ38 1064 aaPredicted RBP16.33■□□□□ 0.2
USP25-205ENST00000449491 SLC4A1APQ9BWU0 796 aaKnown RBP16.21■□□□□ 0.19
USP25-205ENST00000449491 CAPN15O75808 1086 aa16.18■□□□□ 0.18
USP25-205ENST00000449491 DSG3P32926 999 aa16.14■□□□□ 0.17
USP25-205ENST00000449491 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
USP25-205ENST00000449491 HNRNPUL2Q1KMD3 747 aaKnown RBP16.03■□□□□ 0.16
USP25-205ENST00000449491 MYCNP04198 464 aaPredicted RBP15.99■□□□□ 0.15
USP25-205ENST00000449491 TRHP20396 242 aaPredicted RBP15.99■□□□□ 0.15
USP25-205ENST00000449491 SAMD1Q6SPF0 538 aaPredicted RBP15.99■□□□□ 0.15
USP25-205ENST00000449491 APLP2Q06481 763 aa15.96■□□□□ 0.15
USP25-205ENST00000449491 FOXD4L1Q9NU39 408 aa15.93■□□□□ 0.14
USP25-205ENST00000449491 ZNF219Q9P2Y4 722 aaPredicted RBP15.92■□□□□ 0.14
USP25-205ENST00000449491 ZBTB22O15209 634 aa15.9■□□□□ 0.14
USP25-205ENST00000449491 ABCB7O75027 752 aa15.88■□□□□ 0.13
USP25-205ENST00000449491 ATF5Q9Y2D1 282 aaPredicted RBP15.76■□□□□ 0.11
USP25-205ENST00000449491 POLA2Q14181 598 aa15.63■□□□□ 0.09
USP25-205ENST00000449491 ATXN8OSP0DMR3 200 aa15.42■□□□□ 0.06
USP25-205ENST00000449491 CSRNP3Q8WYN3 585 aa15.28■□□□□ 0.04
USP25-205ENST00000449491 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.04
USP25-205ENST00000449491 ZBTB12Q9Y330 459 aaPredicted RBP15.21■□□□□ 0.03
USP25-205ENST00000449491 POTEHQ6S545 545 aa15.15■□□□□ 0.02
USP25-205ENST00000449491 OSCARQ8IYS5 282 aa15.12■□□□□ 0.01
USP25-205ENST00000449491 EHMT2Q96KQ7 1210 aa15.08■□□□□ 0
USP25-205ENST00000449491 MKRN4PQ13434 485 aaPredicted RBP15.02■□□□□ -0
USP25-205ENST00000449491 AKT1S1Q96B36 256 aa15.01□□□□□ -0.01
USP25-205ENST00000449491 CHRDL2Q6WN34 429 aa14.94□□□□□ -0.02
USP25-205ENST00000449491 FBLN2P98095 1184 aa14.93□□□□□ -0.02
USP25-205ENST00000449491 REM2Q8IYK8 340 aaPredicted RBP14.92□□□□□ -0.02
USP25-205ENST00000449491 SPDYE2BA6NHP3 402 aa14.82□□□□□ -0.04
USP25-205ENST00000449491 SPDYE6P0CI01 402 aa14.82□□□□□ -0.04
USP25-205ENST00000449491 SPDYE2Q495Y8 402 aa14.82□□□□□ -0.04
USP25-205ENST00000449491 PITPNM1O00562 1244 aa14.75□□□□□ -0.05
USP25-205ENST00000449491 SSUH2Q9Y2M2 353 aa14.71□□□□□ -0.05
USP25-205ENST00000449491 ZNF692Q9BU19 519 aaPredicted RBP14.68□□□□□ -0.06
USP25-205ENST00000449491 PIP4P2Q8N4L2 257 aa14.66□□□□□ -0.06
USP25-205ENST00000449491 FXR2P51116 673 aaKnown RBP eCLIP14.61□□□□□ -0.07
USP25-205ENST00000449491 PABPN1Q86U42 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
USP25-205ENST00000449491 SPDYE1Q8NFV5 336 aaPredicted RBP14.5□□□□□ -0.09
USP25-205ENST00000449491 CLEC11AQ9Y240 323 aa14.47□□□□□ -0.09
USP25-205ENST00000449491 PRKAR2AP13861 404 aaKnown RBP14.34□□□□□ -0.11
USP25-205ENST00000449491 SPDYE4A6NLX3 237 aa14.29□□□□□ -0.12
USP25-205ENST00000449491 HAX1O00165 279 aa14.28□□□□□ -0.12
USP25-205ENST00000449491 EVX2Q03828 476 aa14.28□□□□□ -0.12
USP25-205ENST00000449491 SP7Q8TDD2 431 aaPredicted RBP14.27□□□□□ -0.13
USP25-205ENST00000449491 PRR29P0C7W0 189 aa14.26□□□□□ -0.13
USP25-205ENST00000449491 CHADLQ6NUI6 762 aa14.26□□□□□ -0.13
USP25-205ENST00000449491 C19orf67A6NJJ6 358 aa14.13□□□□□ -0.15
USP25-205ENST00000449491 PROM2Q8N271 834 aa14.06□□□□□ -0.16
USP25-205ENST00000449491 CREBZFQ9NS37 354 aa14.04□□□□□ -0.16
USP25-205ENST00000449491 STAG3Q9UJ98 1225 aa14.04□□□□□ -0.16
USP25-205ENST00000449491 FARP1Q9Y4F1 1045 aaPredicted RBP14.04□□□□□ -0.16
USP25-205ENST00000449491 CD44P16070 742 aaKnown RBP13.88□□□□□ -0.19
USP25-205ENST00000449491 GABBR2O75899 941 aa13.87□□□□□ -0.19
USP25-205ENST00000449491 MNX1P50219 401 aaPredicted RBP13.87□□□□□ -0.19
USP25-205ENST00000449491 FKBP8Q14318 412 aa13.76□□□□□ -0.21
USP25-205ENST00000449491 ZRANB1Q9UGI0 708 aa13.71□□□□□ -0.21
USP25-205ENST00000449491 ZNF579Q8NAF0 562 aaKnown RBP13.7□□□□□ -0.22
USP25-205ENST00000449491 POTEIP0CG38 1075 aa13.66□□□□□ -0.22
USP25-205ENST00000449491 NPM1P06748 294 aaKnown RBP eCLIP13.65□□□□□ -0.22
USP25-205ENST00000449491 CLCN6P51797 869 aa13.6□□□□□ -0.23
USP25-205ENST00000449491 MIER1Q8N108 512 aa13.59□□□□□ -0.23
USP25-205ENST00000449491 PHF12Q96QT6 1004 aa13.59□□□□□ -0.23
USP25-205ENST00000449491 GALR2O43603 387 aaPredicted RBP13.56□□□□□ -0.24
USP25-205ENST00000449491 PAK3O75914 559 aaPredicted RBP13.53□□□□□ -0.24
USP25-205ENST00000449491 TSPYL2Q9H2G4 693 aaPredicted RBP13.48□□□□□ -0.25
USP25-205ENST00000449491 RASEFQ8IZ41 740 aa13.47□□□□□ -0.25
USP25-205ENST00000449491 PLCD3Q8N3E9 789 aa13.46□□□□□ -0.25
USP25-205ENST00000449491 CCDC61Q9Y6R9 512 aa13.46□□□□□ -0.25
USP25-205ENST00000449491 DCBLD2Q96PD2 775 aa13.44□□□□□ -0.26
USP25-205ENST00000449491 PLEKHG5O94827 1062 aa13.43□□□□□ -0.26
USP25-205ENST00000449491 MS4A3Q96HJ5 214 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms