RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 Q5W150 140 aa7.42□□□□□ -1.22
SHMT2-203ENST00000449049 A6NED7 52 aa7.4□□□□□ -1.22
SHMT2-203ENST00000449049 LOC101927531A0A1B0GV80 90 aa7.4□□□□□ -1.23
SHMT2-203ENST00000449049 KRTAP4-1Q9BYQ7 146 aa7.34□□□□□ -1.23
SHMT2-203ENST00000449049 UBR4Q5T4S7 5183 aa7.33□□□□□ -1.24
SHMT2-203ENST00000449049 COA5Q86WW8 74 aa7.33□□□□□ -1.24
SHMT2-203ENST00000449049 SPINK7P58062 85 aa7.29□□□□□ -1.24
SHMT2-203ENST00000449049 IGKV2-30P06310 120 aa7.28□□□□□ -1.24
SHMT2-203ENST00000449049 LINC01554Q52M75 96 aa7.28□□□□□ -1.24
SHMT2-203ENST00000449049 IGKV2D-30A0A075B6S6 120 aa7.27□□□□□ -1.25
SHMT2-203ENST00000449049 LINC01558Q9Y6Z2 57 aa7.25□□□□□ -1.25
SHMT2-203ENST00000449049 RNF213Q63HN8 5207 aa7.22□□□□□ -1.25
SHMT2-203ENST00000449049 HRES1P13985 223 aa7.22□□□□□ -1.25
SHMT2-203ENST00000449049 PRAC1Q96KF2 57 aa7.19□□□□□ -1.26
SHMT2-203ENST00000449049 MUC2Q02817 5179 aa7.17□□□□□ -1.26
SHMT2-203ENST00000449049 KRTAP19-2Q3LHN2 52 aa7.12□□□□□ -1.27
SHMT2-203ENST00000449049 ADM2Q7Z4H4 148 aa7.1□□□□□ -1.27
SHMT2-203ENST00000449049 COX6B2Q6YFQ2 88 aa7.07□□□□□ -1.28
SHMT2-203ENST00000449049 LCE2CQ5TA81 110 aa7.05□□□□□ -1.28
SHMT2-203ENST00000449049 KRTAP3-1Q9BYR8 98 aa7.03□□□□□ -1.28
SHMT2-203ENST00000449049 ACYP2P14621 99 aa7.01□□□□□ -1.29
SHMT2-203ENST00000449049 H1FX-AS1Q4G0G2 97 aa6.98□□□□□ -1.29
SHMT2-203ENST00000449049 FAT4Q6V0I7 4981 aa6.96□□□□□ -1.3
SHMT2-203ENST00000449049 DMAC1Q96GE9 116 aa6.95□□□□□ -1.3
SHMT2-203ENST00000449049 MT1HP80294 61 aa6.92□□□□□ -1.3
SHMT2-203ENST00000449049 CSAG1Q6PB30 78 aa6.92□□□□□ -1.3
SHMT2-203ENST00000449049 SPATA8Q6RVD6 105 aa6.91□□□□□ -1.3
SHMT2-203ENST00000449049 A0A1B0GU69 56 aa6.89□□□□□ -1.31
SHMT2-203ENST00000449049 LCE2AQ5TA79 106 aaPredicted RBP6.86□□□□□ -1.31
SHMT2-203ENST00000449049 S4R3F8 94 aa6.86□□□□□ -1.31
SHMT2-203ENST00000449049 FLGP20930 4061 aaPredicted RBP6.86□□□□□ -1.31
SHMT2-203ENST00000449049 UQCR11O14957 56 aa6.82□□□□□ -1.32
SHMT2-203ENST00000449049 MIR22HGQ0VDD5 57 aa6.82□□□□□ -1.32
SHMT2-203ENST00000449049 KRTAP3-3Q9BYR6 98 aa6.8□□□□□ -1.32
SHMT2-203ENST00000449049 M0R2T5 61 aa6.79□□□□□ -1.32
SHMT2-203ENST00000449049 ROMO1P60602 79 aa6.79□□□□□ -1.32
SHMT2-203ENST00000449049 KRTAP10-6P60371 365 aaPredicted RBP6.71□□□□□ -1.34
SHMT2-203ENST00000449049 LORP23490 312 aaPredicted RBP6.69□□□□□ -1.34
SHMT2-203ENST00000449049 KRTAP25-1Q3LHN0 102 aa6.68□□□□□ -1.34
SHMT2-203ENST00000449049 KRTAP9-8Q9BYQ0 159 aa6.63□□□□□ -1.35
SHMT2-203ENST00000449049 P0C880 135 aa6.59□□□□□ -1.35
SHMT2-203ENST00000449049 H0YAA0 97 aa6.59□□□□□ -1.35
SHMT2-203ENST00000449049 MT2AP02795 61 aa6.58□□□□□ -1.36
SHMT2-203ENST00000449049 A0A0A0MQY5 61 aa6.58□□□□□ -1.36
SHMT2-203ENST00000449049 MT1FP04733 61 aa6.54□□□□□ -1.36
SHMT2-203ENST00000449049 KRTAP10-10P60014 251 aa6.5□□□□□ -1.37
SHMT2-203ENST00000449049 KRTAP3-2Q9BYR7 98 aa6.49□□□□□ -1.37
SHMT2-203ENST00000449049 A0A1B0GU33 70 aa6.46□□□□□ -1.38
SHMT2-203ENST00000449049 KRTAP9-3Q9BYQ3 159 aa6.41□□□□□ -1.38
SHMT2-203ENST00000449049 CRIPTQ9P021 101 aa6.4□□□□□ -1.39
SHMT2-203ENST00000449049 LCE2DQ5TA82 110 aaPredicted RBP6.34□□□□□ -1.4
SHMT2-203ENST00000449049 NDUFAF8A1L188 74 aa6.33□□□□□ -1.4
SHMT2-203ENST00000449049 SPRR2GQ9BYE4 73 aa6.33□□□□□ -1.4
SHMT2-203ENST00000449049 KRTAP19-1Q8IUB9 90 aa6.32□□□□□ -1.4
SHMT2-203ENST00000449049 K7ERS5 55 aa6.32□□□□□ -1.4
SHMT2-203ENST00000449049 SPINT4Q6UDR6 99 aa6.3□□□□□ -1.4
SHMT2-203ENST00000449049 R4GN34 69 aa6.3□□□□□ -1.4
SHMT2-203ENST00000449049 M0QZ58 72 aa6.28□□□□□ -1.4
SHMT2-203ENST00000449049 LCE2BO14633 110 aa6.26□□□□□ -1.41
SHMT2-203ENST00000449049 KRTAP15-1Q3LI76 137 aa6.26□□□□□ -1.41
SHMT2-203ENST00000449049 KRTAP13-4Q3LI77 160 aa6.23□□□□□ -1.41
SHMT2-203ENST00000449049 KRTAP19-8Q3LI54 63 aa6.21□□□□□ -1.42
SHMT2-203ENST00000449049 KRTAP9-2Q9BYQ4 174 aa6.21□□□□□ -1.42
SHMT2-203ENST00000449049 MT1BP07438 61 aa6.14□□□□□ -1.43
SHMT2-203ENST00000449049 LUZP6Q538Z0 58 aa6.1□□□□□ -1.43
SHMT2-203ENST00000449049 USH2AO75445 5202 aa6.1□□□□□ -1.43
SHMT2-203ENST00000449049 A0A0D9SG42 100 aa6.06□□□□□ -1.44
SHMT2-203ENST00000449049 PLAC4Q8WY50 150 aa6.02□□□□□ -1.45
SHMT2-203ENST00000449049 C10orf95Q9H7T3 257 aa5.99□□□□□ -1.45
SHMT2-203ENST00000449049 KRTAP12-1P59990 96 aa5.98□□□□□ -1.45
SHMT2-203ENST00000449049 KRTAP19-6Q3LI70 58 aa5.96□□□□□ -1.45
SHMT2-203ENST00000449049 SSPOA2VEC9 5147 aa5.95□□□□□ -1.46
SHMT2-203ENST00000449049 FSIP2Q5CZC0 6907 aa5.95□□□□□ -1.46
SHMT2-203ENST00000449049 KRTAP12-2P59991 146 aa5.95□□□□□ -1.46
SHMT2-203ENST00000449049 CRCT1Q9UGL9 99 aa5.95□□□□□ -1.46
SHMT2-203ENST00000449049 KRTAP10-5P60370 271 aa5.89□□□□□ -1.47
SHMT2-203ENST00000449049 MT1XP80297 61 aa5.88□□□□□ -1.47
SHMT2-203ENST00000449049 CAMK2N1Q7Z7J9 78 aa5.86□□□□□ -1.47
SHMT2-203ENST00000449049 PRO2289Q9P1D8 64 aa5.84□□□□□ -1.47
SHMT2-203ENST00000449049 KRTAP9-6A0A140TA67 174 aa5.83□□□□□ -1.48
SHMT2-203ENST00000449049 FCGBPQ9Y6R7 5405 aaPredicted RBP5.73□□□□□ -1.49
SHMT2-203ENST00000449049 KRTAP10-7P60409 375 aaPredicted RBP5.62□□□□□ -1.51
SHMT2-203ENST00000449049 KRTAP10-12P60413 245 aa5.59□□□□□ -1.52
SHMT2-203ENST00000449049 TNP1P09430 55 aa5.54□□□□□ -1.52
SHMT2-203ENST00000449049 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.53□□□□□ -1.52
SHMT2-203ENST00000449049 MACF1Q9UPN3 7388 aaKnown RBP5.47□□□□□ -1.53
SHMT2-203ENST00000449049 KRTAP4-8A0A0G2JLE6 195 aa5.45□□□□□ -1.54
SHMT2-203ENST00000449049 KRTAP4-8Q9BYQ9 185 aa5.45□□□□□ -1.54
SHMT2-203ENST00000449049 PP632Q6XCG6 107 aa5.44□□□□□ -1.54
SHMT2-203ENST00000449049 KRTAP8-1Q8IUC2 63 aa5.39□□□□□ -1.55
SHMT2-203ENST00000449049 KMT2DO14686 5537 aa5.38□□□□□ -1.55
SHMT2-203ENST00000449049 LCE3AQ5TA76 89 aa5.36□□□□□ -1.55
SHMT2-203ENST00000449049 KRTAP6-3Q3LI67 103 aa5.33□□□□□ -1.56
SHMT2-203ENST00000449049 KRTAP23-1A1A580 65 aa5.32□□□□□ -1.56
SHMT2-203ENST00000449049 KRTAP5-9P26371 169 aa5.3□□□□□ -1.56
SHMT2-203ENST00000449049 KRTAP9-7A8MTY7 169 aa5.3□□□□□ -1.56
SHMT2-203ENST00000449049 SYNE2Q8WXH0 6885 aaKnown RBP5.3□□□□□ -1.56
SHMT2-203ENST00000449049 KRTAP19-7Q3SYF9 63 aa5.25□□□□□ -1.57
SHMT2-203ENST00000449049 SPRR2FQ96RM1 72 aa5.24□□□□□ -1.57
SHMT2-203ENST00000449049 KRTAP19-5Q3LI72 72 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms