RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 MYCBP2O75592 4640 aa6.28□□□□□ -1.4
GNE-203ENST00000447283 PRAC1Q96KF2 57 aa6.25□□□□□ -1.41
GNE-203ENST00000447283 ABCA13Q86UQ4 5058 aa6.24□□□□□ -1.41
GNE-203ENST00000447283 ADM2Q7Z4H4 148 aa6.23□□□□□ -1.41
GNE-203ENST00000447283 MT1HL1P0DM35 61 aa6.23□□□□□ -1.41
GNE-203ENST00000447283 A8MUU9 505 aa6.18□□□□□ -1.42
GNE-203ENST00000447283 C20orf166-AS1Q96NR2 134 aa6.18□□□□□ -1.42
GNE-203ENST00000447283 DMBT1Q9UGM3 2413 aaPredicted RBP6.18□□□□□ -1.42
GNE-203ENST00000447283 KRTAP3-1Q9BYR8 98 aa6.13□□□□□ -1.43
GNE-203ENST00000447283 C9orf92A6NGG3 77 aa6.12□□□□□ -1.43
GNE-203ENST00000447283 LINC01554Q52M75 96 aa6.12□□□□□ -1.43
GNE-203ENST00000447283 H0YAA0 97 aa6.11□□□□□ -1.43
GNE-203ENST00000447283 PCLOQ9Y6V0 5065 aa6.08□□□□□ -1.44
GNE-203ENST00000447283 CSAG1Q6PB30 78 aa6.07□□□□□ -1.44
GNE-203ENST00000447283 A0A1B0GU33 70 aa6.07□□□□□ -1.44
GNE-203ENST00000447283 H1FX-AS1Q4G0G2 97 aa6.04□□□□□ -1.44
GNE-203ENST00000447283 COX6B2Q6YFQ2 88 aa6.01□□□□□ -1.45
GNE-203ENST00000447283 TPRXLQ17RH7 258 aa5.94□□□□□ -1.46
GNE-203ENST00000447283 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
GNE-203ENST00000447283 HERC1Q15751 4861 aa5.92□□□□□ -1.46
GNE-203ENST00000447283 XP32Q5T750 250 aa5.91□□□□□ -1.46
GNE-203ENST00000447283 K7ERS5 55 aa5.9□□□□□ -1.46
GNE-203ENST00000447283 KRTAP3-3Q9BYR6 98 aa5.9□□□□□ -1.46
GNE-203ENST00000447283 KRTAP3-2Q9BYR7 98 aa5.9□□□□□ -1.46
GNE-203ENST00000447283 LPAP08519 4548 aa5.89□□□□□ -1.47
GNE-203ENST00000447283 RPL37P61927 97 aaKnown RBP5.86□□□□□ -1.47
GNE-203ENST00000447283 KRTAP10-6P60371 365 aaPredicted RBP5.85□□□□□ -1.47
GNE-203ENST00000447283 KRTAP23-1A1A580 65 aa5.84□□□□□ -1.47
GNE-203ENST00000447283 LRP2P98164 4655 aa5.83□□□□□ -1.48
GNE-203ENST00000447283 HMCN2Q8NDA2 5059 aa5.82□□□□□ -1.48
GNE-203ENST00000447283 ROMO1P60602 79 aa5.79□□□□□ -1.48
GNE-203ENST00000447283 KRTAP13-4Q3LI77 160 aa5.79□□□□□ -1.48
GNE-203ENST00000447283 S4R3F8 94 aa5.78□□□□□ -1.48
GNE-203ENST00000447283 CRIPTQ9P021 101 aa5.74□□□□□ -1.49
GNE-203ENST00000447283 A0A0D9SG42 100 aa5.72□□□□□ -1.49
GNE-203ENST00000447283 P0C880 135 aa5.7□□□□□ -1.5
GNE-203ENST00000447283 MUC17Q685J3 4493 aa5.68□□□□□ -1.5
GNE-203ENST00000447283 LUZP6Q538Z0 58 aa5.63□□□□□ -1.51
GNE-203ENST00000447283 KRTAP12-2P59991 146 aa5.61□□□□□ -1.51
GNE-203ENST00000447283 MUC2Q02817 5179 aa5.6□□□□□ -1.51
GNE-203ENST00000447283 UBR4Q5T4S7 5183 aa5.6□□□□□ -1.51
GNE-203ENST00000447283 KRTAP4-1Q9BYQ7 146 aa5.59□□□□□ -1.51
GNE-203ENST00000447283 KRTAP12-1P59990 96 aa5.58□□□□□ -1.52
GNE-203ENST00000447283 LCE2DQ5TA82 110 aaPredicted RBP5.56□□□□□ -1.52
GNE-203ENST00000447283 M0QZ58 72 aa5.56□□□□□ -1.52
GNE-203ENST00000447283 C10orf95Q9H7T3 257 aa5.55□□□□□ -1.52
GNE-203ENST00000447283 SPINT4Q6UDR6 99 aa5.52□□□□□ -1.53
GNE-203ENST00000447283 RNF213Q63HN8 5207 aa5.52□□□□□ -1.53
GNE-203ENST00000447283 CAMK2N1Q7Z7J9 78 aa5.48□□□□□ -1.53
GNE-203ENST00000447283 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
GNE-203ENST00000447283 KRTAP19-2Q3LHN2 52 aa5.42□□□□□ -1.54
GNE-203ENST00000447283 R4GN34 69 aa5.36□□□□□ -1.55
GNE-203ENST00000447283 FAT4Q6V0I7 4981 aa5.35□□□□□ -1.55
GNE-203ENST00000447283 LCE2CQ5TA81 110 aa5.35□□□□□ -1.55
GNE-203ENST00000447283 FLGP20930 4061 aaPredicted RBP5.34□□□□□ -1.55
GNE-203ENST00000447283 NDUFAF8A1L188 74 aa5.29□□□□□ -1.56
GNE-203ENST00000447283 LORP23490 312 aaPredicted RBP5.27□□□□□ -1.57
GNE-203ENST00000447283 LCE2AQ5TA79 106 aaPredicted RBP5.27□□□□□ -1.57
GNE-203ENST00000447283 MT1HP80294 61 aa5.25□□□□□ -1.57
GNE-203ENST00000447283 M0R2T5 61 aa5.23□□□□□ -1.57
GNE-203ENST00000447283 PLAC4Q8WY50 150 aa5.15□□□□□ -1.59
GNE-203ENST00000447283 PP632Q6XCG6 107 aa5.12□□□□□ -1.59
GNE-203ENST00000447283 LCE2BO14633 110 aa5.05□□□□□ -1.6
GNE-203ENST00000447283 KRTAP9-8Q9BYQ0 159 aa5.05□□□□□ -1.6
GNE-203ENST00000447283 MT2AP02795 61 aa5.01□□□□□ -1.61
GNE-203ENST00000447283 KRTAP10-10P60014 251 aa4.99□□□□□ -1.61
GNE-203ENST00000447283 MT1FP04733 61 aa4.98□□□□□ -1.61
GNE-203ENST00000447283 TNP1P09430 55 aa4.94□□□□□ -1.62
GNE-203ENST00000447283 SPRR2GQ9BYE4 73 aa4.88□□□□□ -1.63
GNE-203ENST00000447283 KRTAP19-1Q8IUB9 90 aa4.87□□□□□ -1.63
GNE-203ENST00000447283 KRTAP9-3Q9BYQ3 159 aa4.87□□□□□ -1.63
GNE-203ENST00000447283 SPRR5A0A1B0GTR4 108 aa4.82□□□□□ -1.64
GNE-203ENST00000447283 KRTAP19-8Q3LI54 63 aa4.75□□□□□ -1.65
GNE-203ENST00000447283 PRO2289Q9P1D8 64 aa4.75□□□□□ -1.65
GNE-203ENST00000447283 MT1BP07438 61 aa4.7□□□□□ -1.66
GNE-203ENST00000447283 USH2AO75445 5202 aa4.68□□□□□ -1.66
GNE-203ENST00000447283 LCE3AQ5TA76 89 aa4.65□□□□□ -1.66
GNE-203ENST00000447283 FSIP2Q5CZC0 6907 aa4.58□□□□□ -1.68
GNE-203ENST00000447283 KRTAP8-1Q8IUC2 63 aa4.58□□□□□ -1.68
GNE-203ENST00000447283 SSPOA2VEC9 5147 aa4.55□□□□□ -1.68
GNE-203ENST00000447283 KRTAP9-2Q9BYQ4 174 aa4.54□□□□□ -1.68
GNE-203ENST00000447283 KRTAP10-5P60370 271 aa4.53□□□□□ -1.68
GNE-203ENST00000447283 MT1XP80297 61 aa4.53□□□□□ -1.68
GNE-203ENST00000447283 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
GNE-203ENST00000447283 KRTAP10-12P60413 245 aa4.45□□□□□ -1.7
GNE-203ENST00000447283 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
GNE-203ENST00000447283 KRTAP10-7P60409 375 aaPredicted RBP4.37□□□□□ -1.71
GNE-203ENST00000447283 CRCT1Q9UGL9 99 aa4.37□□□□□ -1.71
GNE-203ENST00000447283 FCGBPQ9Y6R7 5405 aaPredicted RBP4.37□□□□□ -1.71
GNE-203ENST00000447283 INE1O15225 51 aa4.34□□□□□ -1.72
GNE-203ENST00000447283 KMT2DO14686 5537 aa4.27□□□□□ -1.73
GNE-203ENST00000447283 KRTAP19-5Q3LI72 72 aa4.21□□□□□ -1.73
GNE-203ENST00000447283 KRTAP9-6A0A140TA67 174 aa4.21□□□□□ -1.74
GNE-203ENST00000447283 KRTAP4-8A0A0G2JLE6 195 aa4.2□□□□□ -1.74
GNE-203ENST00000447283 KRTAP4-8Q9BYQ9 185 aa4.2□□□□□ -1.74
GNE-203ENST00000447283 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
GNE-203ENST00000447283 MACF1Q9UPN3 7388 aaKnown RBP4.18□□□□□ -1.74
GNE-203ENST00000447283 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
GNE-203ENST00000447283 SYNE2Q8WXH0 6885 aaKnown RBP4.07□□□□□ -1.76
GNE-203ENST00000447283 KRTAP19-7Q3SYF9 63 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms