RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 LCA10Q71F78 164 aa8.96□□□□□ -0.97
SMC6-206ENST00000446852 J3QL48 77 aa8.94□□□□□ -0.98
SMC6-206ENST00000446852 SPTSSBQ8NFR3 76 aa8.94□□□□□ -0.98
SMC6-206ENST00000446852 CDC42SE1Q9NRR8 79 aa8.9□□□□□ -0.99
SMC6-206ENST00000446852 KRTAP3-3Q9BYR6 98 aa8.81□□□□□ -1
SMC6-206ENST00000446852 SEC61GP60059 68 aa8.81□□□□□ -1
SMC6-206ENST00000446852 PCLOQ9Y6V0 5065 aa8.79□□□□□ -1
SMC6-206ENST00000446852 UQCR11O14957 56 aa8.77□□□□□ -1.01
SMC6-206ENST00000446852 S4R3F8 94 aa8.76□□□□□ -1.01
SMC6-206ENST00000446852 H1FX-AS1Q4G0G2 97 aa8.74□□□□□ -1.01
SMC6-206ENST00000446852 SPATA8Q6RVD6 105 aa8.74□□□□□ -1.01
SMC6-206ENST00000446852 MUC17Q685J3 4493 aa8.73□□□□□ -1.01
SMC6-206ENST00000446852 SEC61BP60468 96 aaKnown RBP8.72□□□□□ -1.01
SMC6-206ENST00000446852 MIR22HGQ0VDD5 57 aa8.72□□□□□ -1.01
SMC6-206ENST00000446852 RBM12B-AS1Q9P1G2 102 aa8.7□□□□□ -1.02
SMC6-206ENST00000446852 HERC1Q15751 4861 aa8.68□□□□□ -1.02
SMC6-206ENST00000446852 PMAIP1Q13794 54 aa8.67□□□□□ -1.02
SMC6-206ENST00000446852 KRTAP4-1Q9BYQ7 146 aa8.66□□□□□ -1.02
SMC6-206ENST00000446852 A0A1B0GU33 70 aa8.63□□□□□ -1.03
SMC6-206ENST00000446852 H0YAA0 97 aa8.62□□□□□ -1.03
SMC6-206ENST00000446852 A6NN06 94 aa8.6□□□□□ -1.03
SMC6-206ENST00000446852 KRTAP10-6P60371 365 aaPredicted RBP8.59□□□□□ -1.03
SMC6-206ENST00000446852 HMCN2Q8NDA2 5059 aa8.59□□□□□ -1.03
SMC6-206ENST00000446852 KRTAP3-2Q9BYR7 98 aa8.58□□□□□ -1.04
SMC6-206ENST00000446852 MUC2Q02817 5179 aa8.51□□□□□ -1.05
SMC6-206ENST00000446852 CSAG1Q6PB30 78 aa8.5□□□□□ -1.05
SMC6-206ENST00000446852 P0C880 135 aa8.49□□□□□ -1.05
SMC6-206ENST00000446852 KRTAP19-2Q3LHN2 52 aa8.46□□□□□ -1.05
SMC6-206ENST00000446852 KRTAP13-4Q3LI77 160 aa8.44□□□□□ -1.06
SMC6-206ENST00000446852 ADM2Q7Z4H4 148 aa8.44□□□□□ -1.06
SMC6-206ENST00000446852 KTN1-AS1Q86SY8 53 aa8.4□□□□□ -1.07
SMC6-206ENST00000446852 FLGP20930 4061 aaPredicted RBP8.31□□□□□ -1.08
SMC6-206ENST00000446852 A0A0D9SG42 100 aa8.29□□□□□ -1.08
SMC6-206ENST00000446852 UBR4Q5T4S7 5183 aa8.22□□□□□ -1.09
SMC6-206ENST00000446852 K7ERS5 55 aa8.19□□□□□ -1.1
SMC6-206ENST00000446852 M0QZ58 72 aa8.19□□□□□ -1.1
SMC6-206ENST00000446852 RNF213Q63HN8 5207 aa8.17□□□□□ -1.1
SMC6-206ENST00000446852 PRAC1Q96KF2 57 aa8.17□□□□□ -1.1
SMC6-206ENST00000446852 FAT4Q6V0I7 4981 aa8.14□□□□□ -1.11
SMC6-206ENST00000446852 LORP23490 312 aaPredicted RBP8.14□□□□□ -1.11
SMC6-206ENST00000446852 LCE2CQ5TA81 110 aa8.13□□□□□ -1.11
SMC6-206ENST00000446852 KRTAP12-2P59991 146 aa8.11□□□□□ -1.11
SMC6-206ENST00000446852 KRTAP12-1P59990 96 aa8.09□□□□□ -1.11
SMC6-206ENST00000446852 R4GN34 69 aa8.09□□□□□ -1.11
SMC6-206ENST00000446852 SPINT4Q6UDR6 99 aa8.04□□□□□ -1.12
SMC6-206ENST00000446852 LINC01554Q52M75 96 aa8.02□□□□□ -1.13
SMC6-206ENST00000446852 ROMO1P60602 79 aa7.97□□□□□ -1.13
SMC6-206ENST00000446852 MT1HP80294 61 aa7.92□□□□□ -1.14
SMC6-206ENST00000446852 CRIPTQ9P021 101 aa7.86□□□□□ -1.15
SMC6-206ENST00000446852 M0R2T5 61 aa7.85□□□□□ -1.15
SMC6-206ENST00000446852 KRTAP25-1Q3LHN0 102 aa7.83□□□□□ -1.16
SMC6-206ENST00000446852 MT2AP02795 61 aa7.7□□□□□ -1.18
SMC6-206ENST00000446852 KRTAP9-8Q9BYQ0 159 aa7.69□□□□□ -1.18
SMC6-206ENST00000446852 C10orf95Q9H7T3 257 aa7.68□□□□□ -1.18
SMC6-206ENST00000446852 MT1FP04733 61 aa7.68□□□□□ -1.18
SMC6-206ENST00000446852 SPRR2GQ9BYE4 73 aa7.67□□□□□ -1.18
SMC6-206ENST00000446852 KRTAP19-1Q8IUB9 90 aa7.66□□□□□ -1.18
SMC6-206ENST00000446852 KRTAP10-10P60014 251 aa7.62□□□□□ -1.19
SMC6-206ENST00000446852 CAMK2N1Q7Z7J9 78 aa7.62□□□□□ -1.19
SMC6-206ENST00000446852 PLAC4Q8WY50 150 aa7.44□□□□□ -1.22
SMC6-206ENST00000446852 KRTAP19-8Q3LI54 63 aa7.4□□□□□ -1.22
SMC6-206ENST00000446852 KRTAP9-3Q9BYQ3 159 aa7.38□□□□□ -1.23
SMC6-206ENST00000446852 LCE2AQ5TA79 106 aaPredicted RBP7.37□□□□□ -1.23
SMC6-206ENST00000446852 MT1BP07438 61 aa7.33□□□□□ -1.24
SMC6-206ENST00000446852 TNP1P09430 55 aa7.28□□□□□ -1.24
SMC6-206ENST00000446852 PP632Q6XCG6 107 aa7.21□□□□□ -1.26
SMC6-206ENST00000446852 KRTAP10-5P60370 271 aa7.17□□□□□ -1.26
SMC6-206ENST00000446852 MT1XP80297 61 aa7.17□□□□□ -1.26
SMC6-206ENST00000446852 LCE2BO14633 110 aa7.16□□□□□ -1.26
SMC6-206ENST00000446852 KRTAP23-1A1A580 65 aa7.1□□□□□ -1.27
SMC6-206ENST00000446852 USH2AO75445 5202 aa7.05□□□□□ -1.28
SMC6-206ENST00000446852 KRTAP15-1Q3LI76 137 aa7.04□□□□□ -1.28
SMC6-206ENST00000446852 LCE3AQ5TA76 89 aa6.99□□□□□ -1.29
SMC6-206ENST00000446852 PRO2289Q9P1D8 64 aa6.94□□□□□ -1.3
SMC6-206ENST00000446852 KRTAP10-7P60409 375 aaPredicted RBP6.92□□□□□ -1.3
SMC6-206ENST00000446852 KRTAP10-12P60413 245 aa6.87□□□□□ -1.31
SMC6-206ENST00000446852 KRTAP8-1Q8IUC2 63 aa6.82□□□□□ -1.32
SMC6-206ENST00000446852 SSPOA2VEC9 5147 aa6.75□□□□□ -1.33
SMC6-206ENST00000446852 KMT2DO14686 5537 aa6.7□□□□□ -1.34
SMC6-206ENST00000446852 KRTAP12-3P60328 96 aa6.67□□□□□ -1.34
SMC6-206ENST00000446852 NDUFAF8A1L188 74 aa6.65□□□□□ -1.35
SMC6-206ENST00000446852 FSIP2Q5CZC0 6907 aa6.63□□□□□ -1.35
SMC6-206ENST00000446852 KRTAP4-8A0A0G2JLE6 195 aa6.59□□□□□ -1.35
SMC6-206ENST00000446852 SPRR5A0A1B0GTR4 108 aa6.59□□□□□ -1.35
SMC6-206ENST00000446852 KRTAP4-8Q9BYQ9 185 aa6.59□□□□□ -1.35
SMC6-206ENST00000446852 KRTAP19-6Q3LI70 58 aa6.57□□□□□ -1.36
SMC6-206ENST00000446852 KRTAP19-5Q3LI72 72 aa6.55□□□□□ -1.36
SMC6-206ENST00000446852 LCE2DQ5TA82 110 aaPredicted RBP6.5□□□□□ -1.37
SMC6-206ENST00000446852 LUZP6Q538Z0 58 aa6.46□□□□□ -1.38
SMC6-206ENST00000446852 KRTAP19-7Q3SYF9 63 aa6.4□□□□□ -1.39
SMC6-206ENST00000446852 FCGBPQ9Y6R7 5405 aaPredicted RBP6.36□□□□□ -1.39
SMC6-206ENST00000446852 H3BS24 57 aa6.35□□□□□ -1.39
SMC6-206ENST00000446852 LCE3CQ5T5A8 94 aa6.25□□□□□ -1.41
SMC6-206ENST00000446852 MT1EP04732 61 aa6.24□□□□□ -1.41
SMC6-206ENST00000446852 MT1LQ93083 61 aa6.17□□□□□ -1.42
SMC6-206ENST00000446852 KRTAP9-2Q9BYQ4 174 aa6.13□□□□□ -1.43
SMC6-206ENST00000446852 KRTAP4-7Q9BYR0 210 aa6.11□□□□□ -1.43
SMC6-206ENST00000446852 MUC12Q9UKN1 5478 aa6.06□□□□□ -1.44
SMC6-206ENST00000446852 MACF1Q9UPN3 7388 aaKnown RBP6.06□□□□□ -1.44
SMC6-206ENST00000446852 KRTAP19-4Q3LI73 84 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms