RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 MMP24-AS1A0A0U1RRL7 71 aa4.09□□□□□ -1.75
SF3A3P1-201ENST00000446317 LOC101927531A0A1B0GV80 90 aa4.09□□□□□ -1.75
SF3A3P1-201ENST00000446317 PSPHP1O15172 72 aa4.09□□□□□ -1.75
SF3A3P1-201ENST00000446317 KRTAP16-1A8MUX0 517 aa4.08□□□□□ -1.76
SF3A3P1-201ENST00000446317 CHKB-CPT1BH3BT56 60 aa4.08□□□□□ -1.76
SF3A3P1-201ENST00000446317 OCR1Q9BZK8 76 aa4.08□□□□□ -1.76
SF3A3P1-201ENST00000446317 SPTSSBQ8NFR3 76 aa4.07□□□□□ -1.76
SF3A3P1-201ENST00000446317 MUC17Q685J3 4493 aa4.07□□□□□ -1.76
SF3A3P1-201ENST00000446317 PCOTHQ58A44 107 aa4.06□□□□□ -1.76
SF3A3P1-201ENST00000446317 CASC2Q6XLA1 102 aa4.05□□□□□ -1.76
SF3A3P1-201ENST00000446317 RPL37P61927 97 aaKnown RBP4.04□□□□□ -1.76
SF3A3P1-201ENST00000446317 SPANXA2-OT1Q8N9U9 137 aa4.04□□□□□ -1.76
SF3A3P1-201ENST00000446317 RNF213Q63HN8 5207 aa4.03□□□□□ -1.76
SF3A3P1-201ENST00000446317 A6NED7 52 aa4.03□□□□□ -1.76
SF3A3P1-201ENST00000446317 MRPL34Q9BQ48 92 aaKnown RBP4.03□□□□□ -1.76
SF3A3P1-201ENST00000446317 KRTAP4-1Q9BYQ7 146 aa4.03□□□□□ -1.76
SF3A3P1-201ENST00000446317 Q8N9P0 234 aaPredicted RBP4.02□□□□□ -1.77
SF3A3P1-201ENST00000446317 ZCCHC13Q8WW36 166 aaKnown RBP4.02□□□□□ -1.77
SF3A3P1-201ENST00000446317 A8MUU9 505 aa4.01□□□□□ -1.77
SF3A3P1-201ENST00000446317 C20orf166-AS1Q96NR2 134 aa4.01□□□□□ -1.77
SF3A3P1-201ENST00000446317 SEC61BP60468 96 aaKnown RBP4□□□□□ -1.77
SF3A3P1-201ENST00000446317 H3BPC8 53 aa3.98□□□□□ -1.77
SF3A3P1-201ENST00000446317 LCE1DQ5T752 114 aa3.98□□□□□ -1.77
SF3A3P1-201ENST00000446317 Q5W150 140 aa3.98□□□□□ -1.77
SF3A3P1-201ENST00000446317 PRR15LQ9BU68 103 aa3.98□□□□□ -1.77
SF3A3P1-201ENST00000446317 LINC00208Q96KT6 92 aa3.98□□□□□ -1.77
SF3A3P1-201ENST00000446317 MUC2Q02817 5179 aa3.97□□□□□ -1.77
SF3A3P1-201ENST00000446317 KRTAP4-7Q9BYR0 210 aa3.97□□□□□ -1.77
SF3A3P1-201ENST00000446317 IGKV2D-30A0A075B6S6 120 aa3.95□□□□□ -1.78
SF3A3P1-201ENST00000446317 IGKV2-30P06310 120 aa3.95□□□□□ -1.78
SF3A3P1-201ENST00000446317 LINC01558Q9Y6Z2 57 aa3.95□□□□□ -1.78
SF3A3P1-201ENST00000446317 A8MU10 97 aa3.94□□□□□ -1.78
SF3A3P1-201ENST00000446317 KRTAP3-1Q9BYR8 98 aa3.93□□□□□ -1.78
SF3A3P1-201ENST00000446317 H0Y9P7 68 aa3.91□□□□□ -1.78
SF3A3P1-201ENST00000446317 SPINK7P58062 85 aa3.91□□□□□ -1.78
SF3A3P1-201ENST00000446317 KRTAP4-9Q9BYQ8 210 aa3.87□□□□□ -1.79
SF3A3P1-201ENST00000446317 TP53AIP1Q9HCN2 124 aa3.87□□□□□ -1.79
SF3A3P1-201ENST00000446317 HRES1P13985 223 aa3.86□□□□□ -1.79
SF3A3P1-201ENST00000446317 COX6B2Q6YFQ2 88 aa3.86□□□□□ -1.79
SF3A3P1-201ENST00000446317 LCE4AQ5TA78 99 aa3.85□□□□□ -1.79
SF3A3P1-201ENST00000446317 FAT4Q6V0I7 4981 aa3.85□□□□□ -1.79
SF3A3P1-201ENST00000446317 KRTAP19-4Q3LI73 84 aa3.84□□□□□ -1.8
SF3A3P1-201ENST00000446317 ROMO1P60602 79 aa3.83□□□□□ -1.8
SF3A3P1-201ENST00000446317 COA5Q86WW8 74 aa3.83□□□□□ -1.8
SF3A3P1-201ENST00000446317 PRAC1Q96KF2 57 aa3.83□□□□□ -1.8
SF3A3P1-201ENST00000446317 KRTAP19-2Q3LHN2 52 aa3.82□□□□□ -1.8
SF3A3P1-201ENST00000446317 KRTAP4-2Q9BYR5 136 aa3.79□□□□□ -1.8
SF3A3P1-201ENST00000446317 SPATA8Q6RVD6 105 aa3.78□□□□□ -1.8
SF3A3P1-201ENST00000446317 CSAG1Q6PB30 78 aa3.76□□□□□ -1.81
SF3A3P1-201ENST00000446317 KRTAP9-7A8MTY7 169 aa3.75□□□□□ -1.81
SF3A3P1-201ENST00000446317 M0R2T5 61 aa3.75□□□□□ -1.81
SF3A3P1-201ENST00000446317 MT1HP80294 61 aa3.75□□□□□ -1.81
SF3A3P1-201ENST00000446317 MIR22HGQ0VDD5 57 aa3.74□□□□□ -1.81
SF3A3P1-201ENST00000446317 ADM2Q7Z4H4 148 aa3.74□□□□□ -1.81
SF3A3P1-201ENST00000446317 FLGP20930 4061 aaPredicted RBP3.74□□□□□ -1.81
SF3A3P1-201ENST00000446317 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
SF3A3P1-201ENST00000446317 UQCR11O14957 56 aa3.73□□□□□ -1.81
SF3A3P1-201ENST00000446317 H1FX-AS1Q4G0G2 97 aa3.72□□□□□ -1.81
SF3A3P1-201ENST00000446317 KRTAP25-1Q3LHN0 102 aa3.7□□□□□ -1.82
SF3A3P1-201ENST00000446317 S4R3F8 94 aa3.68□□□□□ -1.82
SF3A3P1-201ENST00000446317 DMAC1Q96GE9 116 aa3.67□□□□□ -1.82
SF3A3P1-201ENST00000446317 LCE5AQ5TCM9 118 aa3.67□□□□□ -1.82
SF3A3P1-201ENST00000446317 K7ERS5 55 aa3.66□□□□□ -1.82
SF3A3P1-201ENST00000446317 A0A1B0GU69 56 aa3.65□□□□□ -1.83
SF3A3P1-201ENST00000446317 KRTAP5-3Q6L8H2 238 aa3.65□□□□□ -1.83
SF3A3P1-201ENST00000446317 KRTAP9-8Q9BYQ0 159 aa3.65□□□□□ -1.83
SF3A3P1-201ENST00000446317 KRTAP10-6P60371 365 aaPredicted RBP3.64□□□□□ -1.83
SF3A3P1-201ENST00000446317 KRTAP9-3Q9BYQ3 159 aa3.64□□□□□ -1.83
SF3A3P1-201ENST00000446317 ACYP2P14621 99 aa3.63□□□□□ -1.83
SF3A3P1-201ENST00000446317 P0C880 135 aa3.61□□□□□ -1.83
SF3A3P1-201ENST00000446317 MT2AP02795 61 aa3.58□□□□□ -1.84
SF3A3P1-201ENST00000446317 LUZP6Q538Z0 58 aa3.58□□□□□ -1.84
SF3A3P1-201ENST00000446317 MT1FP04733 61 aa3.57□□□□□ -1.84
SF3A3P1-201ENST00000446317 KRTAP10-10P60014 251 aa3.55□□□□□ -1.84
SF3A3P1-201ENST00000446317 KRTAP15-1Q3LI76 137 aa3.54□□□□□ -1.84
SF3A3P1-201ENST00000446317 FSIP2Q5CZC0 6907 aa3.52□□□□□ -1.85
SF3A3P1-201ENST00000446317 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
SF3A3P1-201ENST00000446317 CRCT1Q9UGL9 99 aa3.49□□□□□ -1.85
SF3A3P1-201ENST00000446317 CAMK2N1Q7Z7J9 78 aa3.47□□□□□ -1.85
SF3A3P1-201ENST00000446317 SPINT4Q6UDR6 99 aa3.47□□□□□ -1.85
SF3A3P1-201ENST00000446317 H0YAA0 97 aa3.4□□□□□ -1.87
SF3A3P1-201ENST00000446317 M0QZ58 72 aa3.4□□□□□ -1.87
SF3A3P1-201ENST00000446317 USH2AO75445 5202 aa3.39□□□□□ -1.87
SF3A3P1-201ENST00000446317 KRTAP13-4Q3LI77 160 aa3.37□□□□□ -1.87
SF3A3P1-201ENST00000446317 R4GN34 69 aa3.37□□□□□ -1.87
SF3A3P1-201ENST00000446317 A0A0D9SG42 100 aa3.34□□□□□ -1.88
SF3A3P1-201ENST00000446317 SPRR2GQ9BYE4 73 aa3.33□□□□□ -1.88
SF3A3P1-201ENST00000446317 A0A1B0GU33 70 aa3.32□□□□□ -1.88
SF3A3P1-201ENST00000446317 SSPOA2VEC9 5147 aa3.31□□□□□ -1.88
SF3A3P1-201ENST00000446317 MT1BP07438 61 aa3.31□□□□□ -1.88
SF3A3P1-201ENST00000446317 CRIPTQ9P021 101 aa3.3□□□□□ -1.88
SF3A3P1-201ENST00000446317 KRTAP19-8Q3LI54 63 aa3.28□□□□□ -1.88
SF3A3P1-201ENST00000446317 PLAC4Q8WY50 150 aa3.23□□□□□ -1.89
SF3A3P1-201ENST00000446317 KRTAP12-2P59991 146 aa3.2□□□□□ -1.9
SF3A3P1-201ENST00000446317 KRTAP12-1P59990 96 aa3.18□□□□□ -1.9
SF3A3P1-201ENST00000446317 KRTAP19-6Q3LI70 58 aa3.17□□□□□ -1.9
SF3A3P1-201ENST00000446317 FCGBPQ9Y6R7 5405 aaPredicted RBP3.17□□□□□ -1.9
SF3A3P1-201ENST00000446317 MT1XP80297 61 aa3.16□□□□□ -1.9
SF3A3P1-201ENST00000446317 PRO2289Q9P1D8 64 aa3.16□□□□□ -1.9
SF3A3P1-201ENST00000446317 KRTAP10-5P60370 271 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms