RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 KRTAP3-1Q9BYR8 98 aa7.55□□□□□ -1.2
CCNE1-203ENST00000444983 Q1T7F1 81 aa7.53□□□□□ -1.2
CCNE1-203ENST00000444983 PMAIP1Q13794 54 aa7.52□□□□□ -1.21
CCNE1-203ENST00000444983 FLGP20930 4061 aaPredicted RBP7.49□□□□□ -1.21
CCNE1-203ENST00000444983 MT1HP80294 61 aa7.47□□□□□ -1.21
CCNE1-203ENST00000444983 H1FX-AS1Q4G0G2 97 aa7.47□□□□□ -1.21
CCNE1-203ENST00000444983 LCE2AQ5TA79 106 aaPredicted RBP7.46□□□□□ -1.22
CCNE1-203ENST00000444983 A8MUN3 132 aa7.42□□□□□ -1.22
CCNE1-203ENST00000444983 SPANXA2-OT1Q8N9U9 137 aa7.41□□□□□ -1.22
CCNE1-203ENST00000444983 DMAC1Q96GE9 116 aa7.41□□□□□ -1.22
CCNE1-203ENST00000444983 LCA10Q71F78 164 aa7.32□□□□□ -1.24
CCNE1-203ENST00000444983 KRTAP3-3Q9BYR6 98 aa7.32□□□□□ -1.24
CCNE1-203ENST00000444983 S4R3F8 94 aa7.32□□□□□ -1.24
CCNE1-203ENST00000444983 ACYP2P14621 99 aa7.29□□□□□ -1.24
CCNE1-203ENST00000444983 M0R2T5 61 aa7.28□□□□□ -1.24
CCNE1-203ENST00000444983 KTN1-AS1Q86SY8 53 aa7.28□□□□□ -1.24
CCNE1-203ENST00000444983 Q5VV11 94 aa7.25□□□□□ -1.25
CCNE1-203ENST00000444983 KRTAP10-6P60371 365 aaPredicted RBP7.25□□□□□ -1.25
CCNE1-203ENST00000444983 PSPHP1O15172 72 aa7.24□□□□□ -1.25
CCNE1-203ENST00000444983 LORP23490 312 aaPredicted RBP7.24□□□□□ -1.25
CCNE1-203ENST00000444983 CSAG1Q6PB30 78 aa7.2□□□□□ -1.26
CCNE1-203ENST00000444983 KRTAP9-8Q9BYQ0 159 aa7.18□□□□□ -1.26
CCNE1-203ENST00000444983 A6NN06 94 aa7.16□□□□□ -1.26
CCNE1-203ENST00000444983 COA5Q86WW8 74 aa7.15□□□□□ -1.27
CCNE1-203ENST00000444983 CHKB-CPT1BH3BT56 60 aa7.13□□□□□ -1.27
CCNE1-203ENST00000444983 KRTAP3-2Q9BYR7 98 aa7.13□□□□□ -1.27
CCNE1-203ENST00000444983 CDC42SE1Q9NRR8 79 aa7.11□□□□□ -1.27
CCNE1-203ENST00000444983 MT2AP02795 61 aa7.1□□□□□ -1.27
CCNE1-203ENST00000444983 A8MU10 97 aa7.09□□□□□ -1.27
CCNE1-203ENST00000444983 PRR15LQ9BU68 103 aa7.09□□□□□ -1.27
CCNE1-203ENST00000444983 H0YAA0 97 aa7.06□□□□□ -1.28
CCNE1-203ENST00000444983 SPTSSBQ8NFR3 76 aa7.06□□□□□ -1.28
CCNE1-203ENST00000444983 MT1FP04733 61 aa7.05□□□□□ -1.28
CCNE1-203ENST00000444983 A6NED7 52 aa7.03□□□□□ -1.28
CCNE1-203ENST00000444983 LINC01558Q9Y6Z2 57 aa7.03□□□□□ -1.28
CCNE1-203ENST00000444983 KRTAP10-10P60014 251 aa6.98□□□□□ -1.29
CCNE1-203ENST00000444983 ADM2Q7Z4H4 148 aa6.96□□□□□ -1.3
CCNE1-203ENST00000444983 KRTAP9-3Q9BYQ3 159 aa6.93□□□□□ -1.3
CCNE1-203ENST00000444983 P0C880 135 aa6.9□□□□□ -1.3
CCNE1-203ENST00000444983 CRIPTQ9P021 101 aa6.84□□□□□ -1.31
CCNE1-203ENST00000444983 KRTAP19-1Q8IUB9 90 aa6.84□□□□□ -1.32
CCNE1-203ENST00000444983 SPRR2GQ9BYE4 73 aa6.82□□□□□ -1.32
CCNE1-203ENST00000444983 LCE2BO14633 110 aa6.79□□□□□ -1.32
CCNE1-203ENST00000444983 LINC01554Q52M75 96 aa6.78□□□□□ -1.32
CCNE1-203ENST00000444983 A0A1B0GU69 56 aa6.75□□□□□ -1.33
CCNE1-203ENST00000444983 KRTAP9-2Q9BYQ4 174 aa6.75□□□□□ -1.33
CCNE1-203ENST00000444983 R4GN34 69 aa6.73□□□□□ -1.33
CCNE1-203ENST00000444983 SPATA8Q6RVD6 105 aa6.7□□□□□ -1.34
CCNE1-203ENST00000444983 M0QZ58 72 aa6.69□□□□□ -1.34
CCNE1-203ENST00000444983 KRTAP19-8Q3LI54 63 aa6.69□□□□□ -1.34
CCNE1-203ENST00000444983 PRAC1Q96KF2 57 aa6.68□□□□□ -1.34
CCNE1-203ENST00000444983 H3BS24 57 aa6.68□□□□□ -1.34
CCNE1-203ENST00000444983 A0A1B0GU33 70 aa6.67□□□□□ -1.34
CCNE1-203ENST00000444983 KRTAP13-4Q3LI77 160 aa6.67□□□□□ -1.34
CCNE1-203ENST00000444983 USH2AO75445 5202 aa6.63□□□□□ -1.35
CCNE1-203ENST00000444983 MT1BP07438 61 aa6.62□□□□□ -1.35
CCNE1-203ENST00000444983 FSIP2Q5CZC0 6907 aa6.59□□□□□ -1.35
CCNE1-203ENST00000444983 UQCR11O14957 56 aa6.57□□□□□ -1.36
CCNE1-203ENST00000444983 MIR22HGQ0VDD5 57 aa6.55□□□□□ -1.36
CCNE1-203ENST00000444983 SSPOA2VEC9 5147 aa6.48□□□□□ -1.37
CCNE1-203ENST00000444983 CRCT1Q9UGL9 99 aa6.46□□□□□ -1.37
CCNE1-203ENST00000444983 KRTAP19-6Q3LI70 58 aa6.45□□□□□ -1.38
CCNE1-203ENST00000444983 A0A0D9SG42 100 aa6.44□□□□□ -1.38
CCNE1-203ENST00000444983 PLAC4Q8WY50 150 aa6.44□□□□□ -1.38
CCNE1-203ENST00000444983 KRTAP12-1P59990 96 aa6.39□□□□□ -1.39
CCNE1-203ENST00000444983 KRTAP12-2P59991 146 aa6.36□□□□□ -1.39
CCNE1-203ENST00000444983 KRTAP25-1Q3LHN0 102 aa6.36□□□□□ -1.39
CCNE1-203ENST00000444983 KRTAP10-5P60370 271 aa6.34□□□□□ -1.39
CCNE1-203ENST00000444983 KRTAP9-6A0A140TA67 174 aa6.33□□□□□ -1.4
CCNE1-203ENST00000444983 ROMO1P60602 79 aa6.33□□□□□ -1.4
CCNE1-203ENST00000444983 MT1XP80297 61 aa6.33□□□□□ -1.4
CCNE1-203ENST00000444983 SPINT4Q6UDR6 99 aa6.32□□□□□ -1.4
CCNE1-203ENST00000444983 PRO2289Q9P1D8 64 aa6.25□□□□□ -1.41
CCNE1-203ENST00000444983 FCGBPQ9Y6R7 5405 aaPredicted RBP6.25□□□□□ -1.41
CCNE1-203ENST00000444983 CAMK2N1Q7Z7J9 78 aa6.23□□□□□ -1.41
CCNE1-203ENST00000444983 K7ERS5 55 aa6.14□□□□□ -1.43
CCNE1-203ENST00000444983 C10orf95Q9H7T3 257 aa6.07□□□□□ -1.44
CCNE1-203ENST00000444983 KRTAP10-7P60409 375 aaPredicted RBP6.04□□□□□ -1.44
CCNE1-203ENST00000444983 KRTAP10-12P60413 245 aa6.02□□□□□ -1.45
CCNE1-203ENST00000444983 MACF1Q9UPN3 7388 aaKnown RBP6□□□□□ -1.45
CCNE1-203ENST00000444983 KRTAP9-1A8MXZ3 250 aaPredicted RBP6□□□□□ -1.45
CCNE1-203ENST00000444983 KRTAP15-1Q3LI76 137 aa5.91□□□□□ -1.46
CCNE1-203ENST00000444983 KRTAP4-8A0A0G2JLE6 195 aa5.9□□□□□ -1.47
CCNE1-203ENST00000444983 TNP1P09430 55 aa5.9□□□□□ -1.47
CCNE1-203ENST00000444983 KRTAP4-8Q9BYQ9 185 aa5.9□□□□□ -1.47
CCNE1-203ENST00000444983 KMT2DO14686 5537 aa5.87□□□□□ -1.47
CCNE1-203ENST00000444983 SYNE2Q8WXH0 6885 aaKnown RBP5.85□□□□□ -1.47
CCNE1-203ENST00000444983 NDUFAF8A1L188 74 aa5.81□□□□□ -1.48
CCNE1-203ENST00000444983 KRTAP8-1Q8IUC2 63 aa5.79□□□□□ -1.48
CCNE1-203ENST00000444983 KRTAP6-3Q3LI67 103 aa5.78□□□□□ -1.48
CCNE1-203ENST00000444983 KRTAP5-9P26371 169 aa5.76□□□□□ -1.49
CCNE1-203ENST00000444983 KRTAP9-7A8MTY7 169 aa5.75□□□□□ -1.49
CCNE1-203ENST00000444983 LCE3AQ5TA76 89 aa5.73□□□□□ -1.49
CCNE1-203ENST00000444983 KRTAP23-1A1A580 65 aa5.69□□□□□ -1.5
CCNE1-203ENST00000444983 A0A0A0MQY5 61 aa5.68□□□□□ -1.5
CCNE1-203ENST00000444983 KRTAP19-7Q3SYF9 63 aa5.67□□□□□ -1.5
CCNE1-203ENST00000444983 SPRR2FQ96RM1 72 aa5.65□□□□□ -1.51
CCNE1-203ENST00000444983 KRTAP19-5Q3LI72 72 aa5.62□□□□□ -1.51
CCNE1-203ENST00000444983 MT1EP04732 61 aa5.56□□□□□ -1.52
CCNE1-203ENST00000444983 PP632Q6XCG6 107 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms