RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 SPTSSBQ8NFR3 76 aa7.34□□□□□ -1.23
LINC00299-202ENST00000442956 H1FX-AS1Q4G0G2 97 aa7.33□□□□□ -1.24
LINC00299-202ENST00000442956 MUC2Q02817 5179 aa7.31□□□□□ -1.24
LINC00299-202ENST00000442956 Q5VV11 94 aa7.3□□□□□ -1.24
LINC00299-202ENST00000442956 LCA10Q71F78 164 aa7.3□□□□□ -1.24
LINC00299-202ENST00000442956 S4R3F8 94 aa7.29□□□□□ -1.24
LINC00299-202ENST00000442956 KRTAP3-3Q9BYR6 98 aa7.27□□□□□ -1.25
LINC00299-202ENST00000442956 A0A1B0GU69 56 aa7.26□□□□□ -1.25
LINC00299-202ENST00000442956 UBR4Q5T4S7 5183 aa7.21□□□□□ -1.25
LINC00299-202ENST00000442956 SEC61GP60059 68 aa7.19□□□□□ -1.26
LINC00299-202ENST00000442956 KRTAP19-2Q3LHN2 52 aa7.18□□□□□ -1.26
LINC00299-202ENST00000442956 RNF213Q63HN8 5207 aa7.15□□□□□ -1.26
LINC00299-202ENST00000442956 A6NED7 52 aa7.15□□□□□ -1.27
LINC00299-202ENST00000442956 BRK1Q8WUW1 75 aa7.13□□□□□ -1.27
LINC00299-202ENST00000442956 CSAG1Q6PB30 78 aa7.12□□□□□ -1.27
LINC00299-202ENST00000442956 FLGP20930 4061 aaPredicted RBP7.08□□□□□ -1.28
LINC00299-202ENST00000442956 UQCR11O14957 56 aa7.05□□□□□ -1.28
LINC00299-202ENST00000442956 KRTAP3-2Q9BYR7 98 aa7.04□□□□□ -1.28
LINC00299-202ENST00000442956 A8MU10 97 aa7.03□□□□□ -1.28
LINC00299-202ENST00000442956 KRTAP10-6P60371 365 aaPredicted RBP7.02□□□□□ -1.28
LINC00299-202ENST00000442956 A0A1B0GU33 70 aa7.01□□□□□ -1.29
LINC00299-202ENST00000442956 CDC42SE1Q9NRR8 79 aa7.01□□□□□ -1.29
LINC00299-202ENST00000442956 FAT4Q6V0I7 4981 aa7.01□□□□□ -1.29
LINC00299-202ENST00000442956 ADM2Q7Z4H4 148 aa7□□□□□ -1.29
LINC00299-202ENST00000442956 LCE2CQ5TA81 110 aa6.99□□□□□ -1.29
LINC00299-202ENST00000442956 PRO0628Q9UI54 55 aa6.99□□□□□ -1.29
LINC00299-202ENST00000442956 P0C880 135 aa6.98□□□□□ -1.29
LINC00299-202ENST00000442956 MIR22HGQ0VDD5 57 aa6.98□□□□□ -1.29
LINC00299-202ENST00000442956 SPATA8Q6RVD6 105 aa6.96□□□□□ -1.3
LINC00299-202ENST00000442956 H0YAA0 97 aa6.95□□□□□ -1.3
LINC00299-202ENST00000442956 KRTAP13-4Q3LI77 160 aa6.86□□□□□ -1.31
LINC00299-202ENST00000442956 MT1HP80294 61 aa6.84□□□□□ -1.31
LINC00299-202ENST00000442956 M0R2T5 61 aa6.81□□□□□ -1.32
LINC00299-202ENST00000442956 M0QZ58 72 aa6.77□□□□□ -1.33
LINC00299-202ENST00000442956 A0A0D9SG42 100 aa6.76□□□□□ -1.33
LINC00299-202ENST00000442956 LORP23490 312 aaPredicted RBP6.76□□□□□ -1.33
LINC00299-202ENST00000442956 R4GN34 69 aa6.74□□□□□ -1.33
LINC00299-202ENST00000442956 PMAIP1Q13794 54 aa6.73□□□□□ -1.33
LINC00299-202ENST00000442956 A6NN06 94 aa6.67□□□□□ -1.34
LINC00299-202ENST00000442956 LINC01554Q52M75 96 aa6.65□□□□□ -1.34
LINC00299-202ENST00000442956 K7ERS5 55 aa6.64□□□□□ -1.35
LINC00299-202ENST00000442956 CRIPTQ9P021 101 aa6.62□□□□□ -1.35
LINC00299-202ENST00000442956 KRTAP9-8Q9BYQ0 159 aa6.6□□□□□ -1.35
LINC00299-202ENST00000442956 MT2AP02795 61 aa6.59□□□□□ -1.35
LINC00299-202ENST00000442956 KRTAP12-1P59990 96 aa6.59□□□□□ -1.35
LINC00299-202ENST00000442956 KRTAP12-2P59991 146 aa6.59□□□□□ -1.35
LINC00299-202ENST00000442956 SPINT4Q6UDR6 99 aa6.58□□□□□ -1.36
LINC00299-202ENST00000442956 MT1FP04733 61 aa6.56□□□□□ -1.36
LINC00299-202ENST00000442956 KRTAP10-10P60014 251 aa6.55□□□□□ -1.36
LINC00299-202ENST00000442956 SVIPQ8NHG7 77 aa6.53□□□□□ -1.36
LINC00299-202ENST00000442956 LCE2AQ5TA79 106 aaPredicted RBP6.5□□□□□ -1.37
LINC00299-202ENST00000442956 SPRR2GQ9BYE4 73 aa6.48□□□□□ -1.37
LINC00299-202ENST00000442956 KRTAP19-1Q8IUB9 90 aa6.47□□□□□ -1.37
LINC00299-202ENST00000442956 KTN1-AS1Q86SY8 53 aa6.46□□□□□ -1.38
LINC00299-202ENST00000442956 ROMO1P60602 79 aa6.38□□□□□ -1.39
LINC00299-202ENST00000442956 KRTAP9-3Q9BYQ3 159 aa6.35□□□□□ -1.39
LINC00299-202ENST00000442956 CAMK2N1Q7Z7J9 78 aa6.33□□□□□ -1.4
LINC00299-202ENST00000442956 PRAC1Q96KF2 57 aa6.32□□□□□ -1.4
LINC00299-202ENST00000442956 KRTAP19-8Q3LI54 63 aa6.29□□□□□ -1.4
LINC00299-202ENST00000442956 PLAC4Q8WY50 150 aa6.29□□□□□ -1.4
LINC00299-202ENST00000442956 C10orf95Q9H7T3 257 aa6.24□□□□□ -1.41
LINC00299-202ENST00000442956 MT1BP07438 61 aa6.22□□□□□ -1.41
LINC00299-202ENST00000442956 LCE2BO14633 110 aa6.17□□□□□ -1.42
LINC00299-202ENST00000442956 KRTAP25-1Q3LHN0 102 aa6.13□□□□□ -1.43
LINC00299-202ENST00000442956 USH2AO75445 5202 aa6.08□□□□□ -1.44
LINC00299-202ENST00000442956 MT1XP80297 61 aa6.04□□□□□ -1.44
LINC00299-202ENST00000442956 KRTAP10-5P60370 271 aa6.03□□□□□ -1.44
LINC00299-202ENST00000442956 TNP1P09430 55 aa6.02□□□□□ -1.45
LINC00299-202ENST00000442956 PRO2289Q9P1D8 64 aa5.94□□□□□ -1.46
LINC00299-202ENST00000442956 FSIP2Q5CZC0 6907 aa5.89□□□□□ -1.47
LINC00299-202ENST00000442956 SSPOA2VEC9 5147 aa5.88□□□□□ -1.47
LINC00299-202ENST00000442956 PP632Q6XCG6 107 aa5.86□□□□□ -1.47
LINC00299-202ENST00000442956 LCE2DQ5TA82 110 aaPredicted RBP5.85□□□□□ -1.47
LINC00299-202ENST00000442956 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
LINC00299-202ENST00000442956 KRTAP10-7P60409 375 aaPredicted RBP5.81□□□□□ -1.48
LINC00299-202ENST00000442956 LCE3AQ5TA76 89 aa5.76□□□□□ -1.49
LINC00299-202ENST00000442956 KRTAP10-12P60413 245 aa5.76□□□□□ -1.49
LINC00299-202ENST00000442956 KRTAP9-2Q9BYQ4 174 aa5.75□□□□□ -1.49
LINC00299-202ENST00000442956 KRTAP19-6Q3LI70 58 aa5.75□□□□□ -1.49
LINC00299-202ENST00000442956 KMT2DO14686 5537 aa5.64□□□□□ -1.51
LINC00299-202ENST00000442956 KRTAP8-1Q8IUC2 63 aa5.63□□□□□ -1.51
LINC00299-202ENST00000442956 FCGBPQ9Y6R7 5405 aaPredicted RBP5.61□□□□□ -1.51
LINC00299-202ENST00000442956 KRTAP4-8A0A0G2JLE6 195 aa5.58□□□□□ -1.52
LINC00299-202ENST00000442956 KRTAP4-8Q9BYQ9 185 aa5.58□□□□□ -1.52
LINC00299-202ENST00000442956 KRTAP12-3P60328 96 aa5.53□□□□□ -1.52
LINC00299-202ENST00000442956 CRCT1Q9UGL9 99 aa5.51□□□□□ -1.53
LINC00299-202ENST00000442956 KRTAP19-5Q3LI72 72 aa5.48□□□□□ -1.53
LINC00299-202ENST00000442956 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
LINC00299-202ENST00000442956 KRTAP19-7Q3SYF9 63 aa5.39□□□□□ -1.55
LINC00299-202ENST00000442956 MACF1Q9UPN3 7388 aaKnown RBP5.38□□□□□ -1.55
LINC00299-202ENST00000442956 KRTAP9-6A0A140TA67 174 aa5.36□□□□□ -1.55
LINC00299-202ENST00000442956 MT1EP04732 61 aa5.28□□□□□ -1.56
LINC00299-202ENST00000442956 SYNE2Q8WXH0 6885 aaKnown RBP5.24□□□□□ -1.57
LINC00299-202ENST00000442956 SPRR5A0A1B0GTR4 108 aa5.23□□□□□ -1.57
LINC00299-202ENST00000442956 MUC12Q9UKN1 5478 aa5.21□□□□□ -1.58
LINC00299-202ENST00000442956 MT1LQ93083 61 aa5.19□□□□□ -1.58
LINC00299-202ENST00000442956 LCE3CQ5T5A8 94 aa5.17□□□□□ -1.58
LINC00299-202ENST00000442956 SPRR2FQ96RM1 72 aa5.14□□□□□ -1.59
LINC00299-202ENST00000442956 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.12□□□□□ -1.59
LINC00299-202ENST00000442956 LUZP6Q538Z0 58 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms