RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 LINC00208Q96KT6 92 aa10.26□□□□□ -0.77
HDLBP-220ENST00000442730 KRTAP19-6Q3LI70 58 aa10.24□□□□□ -0.77
HDLBP-220ENST00000442730 KRTAP9-7A8MTY7 169 aa10.21□□□□□ -0.77
HDLBP-220ENST00000442730 LCA10Q71F78 164 aa10.21□□□□□ -0.77
HDLBP-220ENST00000442730 FAM236AA0A1B0GUQ0 79 aa10.17□□□□□ -0.78
HDLBP-220ENST00000442730 FAM236BA0A1B0GV22 79 aa10.17□□□□□ -0.78
HDLBP-220ENST00000442730 CSAG1Q6PB30 78 aa10.17□□□□□ -0.78
HDLBP-220ENST00000442730 H3BPC8 53 aa10.15□□□□□ -0.78
HDLBP-220ENST00000442730 KLKP1Q107X0 134 aa10.15□□□□□ -0.78
HDLBP-220ENST00000442730 MACF1Q9UPN3 7388 aaKnown RBP10.14□□□□□ -0.79
HDLBP-220ENST00000442730 SMIM20Q8N5G0 67 aa10.08□□□□□ -0.8
HDLBP-220ENST00000442730 A8MUN3 132 aa10.06□□□□□ -0.8
HDLBP-220ENST00000442730 SYNE2Q8WXH0 6885 aaKnown RBP10.06□□□□□ -0.8
HDLBP-220ENST00000442730 TRAV7A0A075B6U4 112 aa10.05□□□□□ -0.8
HDLBP-220ENST00000442730 SPRR2GQ9BYE4 73 aa9.98□□□□□ -0.81
HDLBP-220ENST00000442730 MT1BP07438 61 aa9.93□□□□□ -0.82
HDLBP-220ENST00000442730 NDUFC1O43677 76 aa9.92□□□□□ -0.82
HDLBP-220ENST00000442730 KRTAP19-8Q3LI54 63 aa9.91□□□□□ -0.82
HDLBP-220ENST00000442730 DMAC1Q96GE9 116 aa9.91□□□□□ -0.82
HDLBP-220ENST00000442730 Q5VV11 94 aa9.89□□□□□ -0.83
HDLBP-220ENST00000442730 SERP2Q8N6R1 65 aa9.84□□□□□ -0.83
HDLBP-220ENST00000442730 SNURFQ9Y675 71 aa9.83□□□□□ -0.84
HDLBP-220ENST00000442730 CRIPTQ9P021 101 aa9.8□□□□□ -0.84
HDLBP-220ENST00000442730 H0YAA0 97 aa9.78□□□□□ -0.84
HDLBP-220ENST00000442730 C20orf197Q8N268 126 aa9.78□□□□□ -0.84
HDLBP-220ENST00000442730 A6NN06 94 aa9.76□□□□□ -0.85
HDLBP-220ENST00000442730 ACYP2P14621 99 aa9.69□□□□□ -0.86
HDLBP-220ENST00000442730 KRTAP6-3Q3LI67 103 aa9.69□□□□□ -0.86
HDLBP-220ENST00000442730 KRTAP10-5P60370 271 aa9.68□□□□□ -0.86
HDLBP-220ENST00000442730 ADM2Q7Z4H4 148 aa9.66□□□□□ -0.86
HDLBP-220ENST00000442730 SPANXA2-OT1Q8N9U9 137 aa9.64□□□□□ -0.87
HDLBP-220ENST00000442730 COX7CP15954 63 aa9.62□□□□□ -0.87
HDLBP-220ENST00000442730 CHKB-CPT1BH3BT56 60 aa9.56□□□□□ -0.88
HDLBP-220ENST00000442730 SPTSSBQ8NFR3 76 aa9.54□□□□□ -0.88
HDLBP-220ENST00000442730 ANAPC13Q9BS18 74 aa9.52□□□□□ -0.89
HDLBP-220ENST00000442730 NEBP20929 6669 aa9.49□□□□□ -0.89
HDLBP-220ENST00000442730 P0C880 135 aa9.48□□□□□ -0.89
HDLBP-220ENST00000442730 CYSTM1Q9H1C7 97 aa9.44□□□□□ -0.9
HDLBP-220ENST00000442730 H7BZZ5 65 aa9.41□□□□□ -0.9
HDLBP-220ENST00000442730 R4GN34 69 aa9.4□□□□□ -0.9
HDLBP-220ENST00000442730 COA5Q86WW8 74 aa9.37□□□□□ -0.91
HDLBP-220ENST00000442730 M0QZ58 72 aa9.35□□□□□ -0.91
HDLBP-220ENST00000442730 MT1XP80297 61 aa9.32□□□□□ -0.92
HDLBP-220ENST00000442730 MUC12Q9UKN1 5478 aa9.32□□□□□ -0.92
HDLBP-220ENST00000442730 PLAC4Q8WY50 150 aa9.31□□□□□ -0.92
HDLBP-220ENST00000442730 PRO2289Q9P1D8 64 aa9.31□□□□□ -0.92
HDLBP-220ENST00000442730 KRTAP5-9P26371 169 aa9.3□□□□□ -0.92
HDLBP-220ENST00000442730 CCDC179H3BU77 68 aa9.29□□□□□ -0.92
HDLBP-220ENST00000442730 PCP4P48539 62 aa9.22□□□□□ -0.93
HDLBP-220ENST00000442730 KMT2DO14686 5537 aa9.21□□□□□ -0.94
HDLBP-220ENST00000442730 LINC01554Q52M75 96 aa9.19□□□□□ -0.94
HDLBP-220ENST00000442730 MDN1Q9NU22 5596 aa9.1□□□□□ -0.95
HDLBP-220ENST00000442730 ATP5EP56381 51 aaPredicted RBP9.09□□□□□ -0.95
HDLBP-220ENST00000442730 KRTAP12-2P59991 146 aa9.08□□□□□ -0.96
HDLBP-220ENST00000442730 SEC61GP60059 68 aa9.06□□□□□ -0.96
HDLBP-220ENST00000442730 TMEM258P61165 79 aa9.02□□□□□ -0.97
HDLBP-220ENST00000442730 SERP1Q9Y6X1 66 aa9.02□□□□□ -0.97
HDLBP-220ENST00000442730 SPRR2FQ96RM1 72 aa9.01□□□□□ -0.97
HDLBP-220ENST00000442730 KRTAP13-4Q3LI77 160 aa9□□□□□ -0.97
HDLBP-220ENST00000442730 KRTAP8-1Q8IUC2 63 aa8.98□□□□□ -0.97
HDLBP-220ENST00000442730 KRTAP20-1Q3LI63 56 aa8.96□□□□□ -0.98
HDLBP-220ENST00000442730 KRTAP10-7P60409 375 aaPredicted RBP8.89□□□□□ -0.99
HDLBP-220ENST00000442730 KRTAP4-8A0A0G2JLE6 195 aa8.88□□□□□ -0.99
HDLBP-220ENST00000442730 KRTAP4-8Q9BYQ9 185 aa8.88□□□□□ -0.99
HDLBP-220ENST00000442730 A0A1B0GU69 56 aa8.87□□□□□ -0.99
HDLBP-220ENST00000442730 A0A1B0GU33 70 aa8.86□□□□□ -0.99
HDLBP-220ENST00000442730 SPRR2EP22531 72 aa8.86□□□□□ -0.99
HDLBP-220ENST00000442730 SPRR2BP35325 72 aa8.86□□□□□ -0.99
HDLBP-220ENST00000442730 SPRR2AP35326 72 aa8.86□□□□□ -0.99
HDLBP-220ENST00000442730 KRTAP10-12P60413 245 aa8.84□□□□□ -0.99
HDLBP-220ENST00000442730 SPATA8Q6RVD6 105 aa8.8□□□□□ -1
HDLBP-220ENST00000442730 A0A0D9SG42 100 aa8.78□□□□□ -1
HDLBP-220ENST00000442730 LCE1AQ5T7P2 110 aa8.77□□□□□ -1.01
HDLBP-220ENST00000442730 KRTAP2-3P0C7H8 128 aa8.72□□□□□ -1.01
HDLBP-220ENST00000442730 PRR15LQ9BU68 103 aa8.72□□□□□ -1.01
HDLBP-220ENST00000442730 KRTAP2-4Q9BYR9 128 aa8.72□□□□□ -1.01
HDLBP-220ENST00000442730 CAMK2N1Q7Z7J9 78 aa8.7□□□□□ -1.02
HDLBP-220ENST00000442730 LINC01558Q9Y6Z2 57 aa8.68□□□□□ -1.02
HDLBP-220ENST00000442730 SMIM26A0A096LP01 95 aa8.62□□□□□ -1.03
HDLBP-220ENST00000442730 RPS28P62857 69 aaKnown RBP8.61□□□□□ -1.03
HDLBP-220ENST00000442730 SPINT4Q6UDR6 99 aa8.61□□□□□ -1.03
HDLBP-220ENST00000442730 KRTAP12-1P59990 96 aa8.59□□□□□ -1.03
HDLBP-220ENST00000442730 SPRR2DP22532 72 aa8.57□□□□□ -1.04
HDLBP-220ENST00000442730 A8MU10 97 aa8.56□□□□□ -1.04
HDLBP-220ENST00000442730 KRTAP2-2Q9BYT5 123 aa8.44□□□□□ -1.06
HDLBP-220ENST00000442730 KRTAP2-1Q9BYU5 128 aa8.44□□□□□ -1.06
HDLBP-220ENST00000442730 UQCR11O14957 56 aa8.41□□□□□ -1.06
HDLBP-220ENST00000442730 V9GYY9 64 aa8.4□□□□□ -1.06
HDLBP-220ENST00000442730 Q1T7F1 81 aa8.37□□□□□ -1.07
HDLBP-220ENST00000442730 KRTAP19-7Q3SYF9 63 aa8.33□□□□□ -1.08
HDLBP-220ENST00000442730 LCE3BQ5TA77 95 aa8.33□□□□□ -1.08
HDLBP-220ENST00000442730 PSPHP1O15172 72 aa8.31□□□□□ -1.08
HDLBP-220ENST00000442730 MT1EP04732 61 aa8.26□□□□□ -1.09
HDLBP-220ENST00000442730 MIR22HGQ0VDD5 57 aa8.26□□□□□ -1.09
HDLBP-220ENST00000442730 LCE5AQ5TCM9 118 aa8.19□□□□□ -1.1
HDLBP-220ENST00000442730 C10orf95Q9H7T3 257 aa8.17□□□□□ -1.1
HDLBP-220ENST00000442730 KRTAP19-3Q7Z4W3 81 aa8.16□□□□□ -1.1
HDLBP-220ENST00000442730 KRTAP19-5Q3LI72 72 aa8.12□□□□□ -1.11
HDLBP-220ENST00000442730 TNP1P09430 55 aa8.09□□□□□ -1.11
HDLBP-220ENST00000442730 A6NED7 52 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms