RNA–Protein interactions for RNA: ENST00000441983.5

TRAPPC12-210, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-210ENST00000441983 SPANXA2-OT1Q8N9U9 137 aa7.16□□□□□ -1.26
TRAPPC12-210ENST00000441983 KRTAP9-2Q9BYQ4 174 aa7.16□□□□□ -1.26
TRAPPC12-210ENST00000441983 KRTAP3-3Q9BYR6 98 aa7.16□□□□□ -1.26
TRAPPC12-210ENST00000441983 NDUFC1O43677 76 aa7.15□□□□□ -1.26
TRAPPC12-210ENST00000441983 MT1FP04733 61 aa7.14□□□□□ -1.27
TRAPPC12-210ENST00000441983 KRTAP10-10P60014 251 aa7.12□□□□□ -1.27
TRAPPC12-210ENST00000441983 ANAPC13Q9BS18 74 aa7.12□□□□□ -1.27
TRAPPC12-210ENST00000441983 ACYP2P14621 99 aa7.11□□□□□ -1.27
TRAPPC12-210ENST00000441983 H0YAA0 97 aa7.06□□□□□ -1.28
TRAPPC12-210ENST00000441983 KRTAP9-3Q9BYQ3 159 aa7.04□□□□□ -1.28
TRAPPC12-210ENST00000441983 H7BZZ5 65 aa7□□□□□ -1.29
TRAPPC12-210ENST00000441983 SPTSSBQ8NFR3 76 aa7□□□□□ -1.29
TRAPPC12-210ENST00000441983 CHKB-CPT1BH3BT56 60 aa6.96□□□□□ -1.3
TRAPPC12-210ENST00000441983 CRIPTQ9P021 101 aa6.95□□□□□ -1.3
TRAPPC12-210ENST00000441983 CYSTM1Q9H1C7 97 aa6.94□□□□□ -1.3
TRAPPC12-210ENST00000441983 CCDC179H3BU77 68 aa6.92□□□□□ -1.3
TRAPPC12-210ENST00000441983 FSIP2Q5CZC0 6907 aa6.91□□□□□ -1.3
TRAPPC12-210ENST00000441983 USH2AO75445 5202 aa6.91□□□□□ -1.3
TRAPPC12-210ENST00000441983 LCE2BO14633 110 aa6.89□□□□□ -1.31
TRAPPC12-210ENST00000441983 ATP5EP56381 51 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC12-210ENST00000441983 ADM2Q7Z4H4 148 aa6.88□□□□□ -1.31
TRAPPC12-210ENST00000441983 COA5Q86WW8 74 aa6.87□□□□□ -1.31
TRAPPC12-210ENST00000441983 SPRR2GQ9BYE4 73 aa6.87□□□□□ -1.31
TRAPPC12-210ENST00000441983 KRTAP19-1Q8IUB9 90 aa6.84□□□□□ -1.31
TRAPPC12-210ENST00000441983 CRCT1Q9UGL9 99 aa6.84□□□□□ -1.31
TRAPPC12-210ENST00000441983 KRTAP9-6A0A140TA67 174 aa6.81□□□□□ -1.32
TRAPPC12-210ENST00000441983 TMEM258P61165 79 aa6.79□□□□□ -1.32
TRAPPC12-210ENST00000441983 SSPOA2VEC9 5147 aa6.78□□□□□ -1.32
TRAPPC12-210ENST00000441983 KRTAP3-2Q9BYR7 98 aa6.77□□□□□ -1.33
TRAPPC12-210ENST00000441983 KRTAP19-8Q3LI54 63 aa6.76□□□□□ -1.33
TRAPPC12-210ENST00000441983 P0C880 135 aa6.75□□□□□ -1.33
TRAPPC12-210ENST00000441983 R4GN34 69 aa6.73□□□□□ -1.33
TRAPPC12-210ENST00000441983 Q5VV11 94 aa6.72□□□□□ -1.33
TRAPPC12-210ENST00000441983 KRTAP19-6Q3LI70 58 aa6.67□□□□□ -1.34
TRAPPC12-210ENST00000441983 M0QZ58 72 aa6.66□□□□□ -1.34
TRAPPC12-210ENST00000441983 MT1BP07438 61 aa6.66□□□□□ -1.34
TRAPPC12-210ENST00000441983 SEC61GP60059 68 aa6.66□□□□□ -1.34
TRAPPC12-210ENST00000441983 PCP4P48539 62 aa6.65□□□□□ -1.34
TRAPPC12-210ENST00000441983 SERP1Q9Y6X1 66 aa6.63□□□□□ -1.35
TRAPPC12-210ENST00000441983 FCGBPQ9Y6R7 5405 aaPredicted RBP6.56□□□□□ -1.36
TRAPPC12-210ENST00000441983 A0A1B0GU69 56 aa6.53□□□□□ -1.36
TRAPPC12-210ENST00000441983 A6NN06 94 aa6.51□□□□□ -1.37
TRAPPC12-210ENST00000441983 PLAC4Q8WY50 150 aa6.51□□□□□ -1.37
TRAPPC12-210ENST00000441983 PRR15LQ9BU68 103 aa6.49□□□□□ -1.37
TRAPPC12-210ENST00000441983 LINC01554Q52M75 96 aa6.48□□□□□ -1.37
TRAPPC12-210ENST00000441983 A0A1B0GU33 70 aa6.47□□□□□ -1.37
TRAPPC12-210ENST00000441983 KRTAP10-5P60370 271 aa6.47□□□□□ -1.37
TRAPPC12-210ENST00000441983 LINC01558Q9Y6Z2 57 aa6.47□□□□□ -1.37
TRAPPC12-210ENST00000441983 KRTAP13-4Q3LI77 160 aa6.44□□□□□ -1.38
TRAPPC12-210ENST00000441983 PRO2289Q9P1D8 64 aa6.43□□□□□ -1.38
TRAPPC12-210ENST00000441983 V9GYY9 64 aa6.39□□□□□ -1.39
TRAPPC12-210ENST00000441983 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC12-210ENST00000441983 MACF1Q9UPN3 7388 aaKnown RBP6.34□□□□□ -1.39
TRAPPC12-210ENST00000441983 MT1XP80297 61 aa6.34□□□□□ -1.39
TRAPPC12-210ENST00000441983 SPATA8Q6RVD6 105 aa6.34□□□□□ -1.39
TRAPPC12-210ENST00000441983 SMIM26A0A096LP01 95 aa6.33□□□□□ -1.4
TRAPPC12-210ENST00000441983 RPS28P62857 69 aaKnown RBP6.33□□□□□ -1.4
TRAPPC12-210ENST00000441983 Q1T7F1 81 aa6.31□□□□□ -1.4
TRAPPC12-210ENST00000441983 A0A0D9SG42 100 aa6.27□□□□□ -1.41
TRAPPC12-210ENST00000441983 UQCR11O14957 56 aa6.27□□□□□ -1.41
TRAPPC12-210ENST00000441983 CAMK2N1Q7Z7J9 78 aa6.22□□□□□ -1.41
TRAPPC12-210ENST00000441983 KRTAP12-1P59990 96 aa6.21□□□□□ -1.42
TRAPPC12-210ENST00000441983 KRTAP12-2P59991 146 aa6.2□□□□□ -1.42
TRAPPC12-210ENST00000441983 SYNE2Q8WXH0 6885 aaKnown RBP6.19□□□□□ -1.42
TRAPPC12-210ENST00000441983 SPINT4Q6UDR6 99 aa6.18□□□□□ -1.42
TRAPPC12-210ENST00000441983 KRTAP9-7A8MTY7 169 aa6.16□□□□□ -1.42
TRAPPC12-210ENST00000441983 A8MU10 97 aa6.16□□□□□ -1.42
TRAPPC12-210ENST00000441983 PSPHP1O15172 72 aa6.15□□□□□ -1.42
TRAPPC12-210ENST00000441983 MIR22HGQ0VDD5 57 aa6.12□□□□□ -1.43
TRAPPC12-210ENST00000441983 KRTAP6-3Q3LI67 103 aa6.09□□□□□ -1.43
TRAPPC12-210ENST00000441983 KRTAP10-12P60413 245 aa6.06□□□□□ -1.44
TRAPPC12-210ENST00000441983 KRTAP10-7P60409 375 aaPredicted RBP6.02□□□□□ -1.45
TRAPPC12-210ENST00000441983 KMT2DO14686 5537 aa6.02□□□□□ -1.45
TRAPPC12-210ENST00000441983 A6NED7 52 aa6.01□□□□□ -1.45
TRAPPC12-210ENST00000441983 K7ERS5 55 aa5.99□□□□□ -1.45
TRAPPC12-210ENST00000441983 KRTAP5-9P26371 169 aa5.99□□□□□ -1.45
TRAPPC12-210ENST00000441983 KRTAP8-1Q8IUC2 63 aa5.95□□□□□ -1.46
TRAPPC12-210ENST00000441983 MUC12Q9UKN1 5478 aa5.89□□□□□ -1.47
TRAPPC12-210ENST00000441983 KRTAP4-8A0A0G2JLE6 195 aa5.88□□□□□ -1.47
TRAPPC12-210ENST00000441983 KRTAP4-8Q9BYQ9 185 aa5.88□□□□□ -1.47
TRAPPC12-210ENST00000441983 C10orf95Q9H7T3 257 aa5.87□□□□□ -1.47
TRAPPC12-210ENST00000441983 CDC42SE1Q9NRR8 79 aa5.87□□□□□ -1.47
TRAPPC12-210ENST00000441983 TNP1P09430 55 aa5.86□□□□□ -1.47
TRAPPC12-210ENST00000441983 SPRR2FQ96RM1 72 aa5.83□□□□□ -1.48
TRAPPC12-210ENST00000441983 MDN1Q9NU22 5596 aa5.81□□□□□ -1.48
TRAPPC12-210ENST00000441983 NEBP20929 6669 aa5.78□□□□□ -1.48
TRAPPC12-210ENST00000441983 KRTAP25-1Q3LHN0 102 aa5.74□□□□□ -1.49
TRAPPC12-210ENST00000441983 SPRR2EP22531 72 aa5.66□□□□□ -1.5
TRAPPC12-210ENST00000441983 SPRR2BP35325 72 aa5.66□□□□□ -1.5
TRAPPC12-210ENST00000441983 SPRR2AP35326 72 aa5.66□□□□□ -1.5
TRAPPC12-210ENST00000441983 KRTAP19-7Q3SYF9 63 aa5.66□□□□□ -1.5
TRAPPC12-210ENST00000441983 LCE1AQ5T7P2 110 aa5.64□□□□□ -1.51
TRAPPC12-210ENST00000441983 LCE3AQ5TA76 89 aa5.64□□□□□ -1.51
TRAPPC12-210ENST00000441983 ROMO1P60602 79 aa5.62□□□□□ -1.51
TRAPPC12-210ENST00000441983 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
TRAPPC12-210ENST00000441983 MT1EP04732 61 aa5.6□□□□□ -1.51
TRAPPC12-210ENST00000441983 KRTAP19-5Q3LI72 72 aa5.59□□□□□ -1.51
TRAPPC12-210ENST00000441983 BRK1Q8WUW1 75 aa5.55□□□□□ -1.52
TRAPPC12-210ENST00000441983 KRTAP19-3Q7Z4W3 81 aa5.5□□□□□ -1.53
TRAPPC12-210ENST00000441983 SPRR2DP22532 72 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms