RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 CHKB-CPT1BH3BT56 60 aa13.75□□□□□ -0.21
CGREF1-207ENST00000440612 KRTAP3-3Q9BYR6 98 aa13.75□□□□□ -0.21
CGREF1-207ENST00000440612 LCA10Q71F78 164 aa13.75□□□□□ -0.21
CGREF1-207ENST00000440612 S4R3F8 94 aa13.72□□□□□ -0.21
CGREF1-207ENST00000440612 FLGP20930 4061 aaPredicted RBP13.72□□□□□ -0.21
CGREF1-207ENST00000440612 FAT4Q6V0I7 4981 aa13.66□□□□□ -0.22
CGREF1-207ENST00000440612 SMIM26A0A096LP01 95 aa13.58□□□□□ -0.24
CGREF1-207ENST00000440612 SPTSSBQ8NFR3 76 aa13.5□□□□□ -0.25
CGREF1-207ENST00000440612 MT1HP80294 61 aa13.44□□□□□ -0.26
CGREF1-207ENST00000440612 CSAG1Q6PB30 78 aa13.43□□□□□ -0.26
CGREF1-207ENST00000440612 Q1T7F1 81 aa13.4□□□□□ -0.26
CGREF1-207ENST00000440612 LINC01558Q9Y6Z2 57 aa13.37□□□□□ -0.27
CGREF1-207ENST00000440612 V9GYY9 64 aa13.28□□□□□ -0.28
CGREF1-207ENST00000440612 KRTAP3-2Q9BYR7 98 aa13.21□□□□□ -0.29
CGREF1-207ENST00000440612 H0YAA0 97 aa13.18□□□□□ -0.3
CGREF1-207ENST00000440612 A0A1B0GU69 56 aa13.17□□□□□ -0.3
CGREF1-207ENST00000440612 PRR15LQ9BU68 103 aa13.17□□□□□ -0.3
CGREF1-207ENST00000440612 KRTAP10-6P60371 365 aaPredicted RBP13.16□□□□□ -0.3
CGREF1-207ENST00000440612 M0R2T5 61 aa13.15□□□□□ -0.3
CGREF1-207ENST00000440612 PSPHP1O15172 72 aa13.15□□□□□ -0.3
CGREF1-207ENST00000440612 ADM2Q7Z4H4 148 aa13.12□□□□□ -0.31
CGREF1-207ENST00000440612 LCE2AQ5TA79 106 aaPredicted RBP13.11□□□□□ -0.31
CGREF1-207ENST00000440612 SEC61GP60059 68 aa13.08□□□□□ -0.31
CGREF1-207ENST00000440612 Q5VV11 94 aa13.08□□□□□ -0.31
CGREF1-207ENST00000440612 P0C880 135 aa13.08□□□□□ -0.32
CGREF1-207ENST00000440612 KRTAP9-8Q9BYQ0 159 aa12.96□□□□□ -0.33
CGREF1-207ENST00000440612 LORP23490 312 aaPredicted RBP12.93□□□□□ -0.34
CGREF1-207ENST00000440612 MT2AP02795 61 aa12.88□□□□□ -0.35
CGREF1-207ENST00000440612 A0A1B0GU33 70 aa12.86□□□□□ -0.35
CGREF1-207ENST00000440612 MT1FP04733 61 aa12.8□□□□□ -0.36
CGREF1-207ENST00000440612 KRTAP13-4Q3LI77 160 aa12.79□□□□□ -0.36
CGREF1-207ENST00000440612 UQCR11O14957 56 aa12.73□□□□□ -0.37
CGREF1-207ENST00000440612 A6NED7 52 aa12.7□□□□□ -0.38
CGREF1-207ENST00000440612 SPATA8Q6RVD6 105 aa12.7□□□□□ -0.38
CGREF1-207ENST00000440612 KRTAP10-10P60014 251 aa12.67□□□□□ -0.38
CGREF1-207ENST00000440612 M0QZ58 72 aa12.64□□□□□ -0.39
CGREF1-207ENST00000440612 CRIPTQ9P021 101 aa12.62□□□□□ -0.39
CGREF1-207ENST00000440612 R4GN34 69 aa12.61□□□□□ -0.39
CGREF1-207ENST00000440612 MIR22HGQ0VDD5 57 aa12.59□□□□□ -0.39
CGREF1-207ENST00000440612 A8MU10 97 aa12.54□□□□□ -0.4
CGREF1-207ENST00000440612 KRTAP19-1Q8IUB9 90 aa12.53□□□□□ -0.4
CGREF1-207ENST00000440612 SPRR2GQ9BYE4 73 aa12.51□□□□□ -0.41
CGREF1-207ENST00000440612 KRTAP9-3Q9BYQ3 159 aa12.5□□□□□ -0.41
CGREF1-207ENST00000440612 CDC42SE1Q9NRR8 79 aa12.49□□□□□ -0.41
CGREF1-207ENST00000440612 A0A0D9SG42 100 aa12.42□□□□□ -0.42
CGREF1-207ENST00000440612 BRK1Q8WUW1 75 aa12.42□□□□□ -0.42
CGREF1-207ENST00000440612 LINC01554Q52M75 96 aa12.37□□□□□ -0.43
CGREF1-207ENST00000440612 KRTAP12-1P59990 96 aa12.25□□□□□ -0.45
CGREF1-207ENST00000440612 KRTAP19-8Q3LI54 63 aa12.22□□□□□ -0.45
CGREF1-207ENST00000440612 KRTAP12-2P59991 146 aa12.21□□□□□ -0.45
CGREF1-207ENST00000440612 A6NN06 94 aa12.2□□□□□ -0.46
CGREF1-207ENST00000440612 LCE2BO14633 110 aa12.19□□□□□ -0.46
CGREF1-207ENST00000440612 SPINT4Q6UDR6 99 aa12.11□□□□□ -0.47
CGREF1-207ENST00000440612 MT1BP07438 61 aa12.1□□□□□ -0.47
CGREF1-207ENST00000440612 PRO0628Q9UI54 55 aa12.06□□□□□ -0.48
CGREF1-207ENST00000440612 USH2AO75445 5202 aa12□□□□□ -0.49
CGREF1-207ENST00000440612 K7ERS5 55 aa11.94□□□□□ -0.5
CGREF1-207ENST00000440612 LCE2DQ5TA82 110 aaPredicted RBP11.92□□□□□ -0.5
CGREF1-207ENST00000440612 PLAC4Q8WY50 150 aa11.91□□□□□ -0.5
CGREF1-207ENST00000440612 CAMK2N1Q7Z7J9 78 aa11.76□□□□□ -0.53
CGREF1-207ENST00000440612 PMAIP1Q13794 54 aa11.73□□□□□ -0.53
CGREF1-207ENST00000440612 MT1XP80297 61 aa11.65□□□□□ -0.54
CGREF1-207ENST00000440612 SSPOA2VEC9 5147 aa11.64□□□□□ -0.55
CGREF1-207ENST00000440612 KRTAP10-5P60370 271 aa11.63□□□□□ -0.55
CGREF1-207ENST00000440612 C10orf95Q9H7T3 257 aa11.62□□□□□ -0.55
CGREF1-207ENST00000440612 FSIP2Q5CZC0 6907 aa11.56□□□□□ -0.56
CGREF1-207ENST00000440612 KRTAP9-2Q9BYQ4 174 aa11.55□□□□□ -0.56
CGREF1-207ENST00000440612 ROMO1P60602 79 aa11.53□□□□□ -0.56
CGREF1-207ENST00000440612 KRTAP19-6Q3LI70 58 aa11.46□□□□□ -0.58
CGREF1-207ENST00000440612 PRO2289Q9P1D8 64 aa11.4□□□□□ -0.59
CGREF1-207ENST00000440612 KTN1-AS1Q86SY8 53 aa11.19□□□□□ -0.62
CGREF1-207ENST00000440612 TNP1P09430 55 aa11.18□□□□□ -0.62
CGREF1-207ENST00000440612 KRTAP25-1Q3LHN0 102 aa11.18□□□□□ -0.62
CGREF1-207ENST00000440612 KRTAP10-7P60409 375 aaPredicted RBP11.17□□□□□ -0.62
CGREF1-207ENST00000440612 FCGBPQ9Y6R7 5405 aaPredicted RBP11.17□□□□□ -0.62
CGREF1-207ENST00000440612 CRCT1Q9UGL9 99 aa11.11□□□□□ -0.63
CGREF1-207ENST00000440612 PRAC1Q96KF2 57 aa11.08□□□□□ -0.64
CGREF1-207ENST00000440612 KRTAP10-12P60413 245 aa11.04□□□□□ -0.64
CGREF1-207ENST00000440612 KMT2DO14686 5537 aa10.85□□□□□ -0.67
CGREF1-207ENST00000440612 LCE3AQ5TA76 89 aa10.84□□□□□ -0.67
CGREF1-207ENST00000440612 KRTAP23-1A1A580 65 aa10.82□□□□□ -0.68
CGREF1-207ENST00000440612 KRTAP4-8A0A0G2JLE6 195 aa10.79□□□□□ -0.68
CGREF1-207ENST00000440612 KRTAP4-8Q9BYQ9 185 aa10.79□□□□□ -0.68
CGREF1-207ENST00000440612 PP632Q6XCG6 107 aa10.73□□□□□ -0.69
CGREF1-207ENST00000440612 KRTAP9-6A0A140TA67 174 aa10.69□□□□□ -0.7
CGREF1-207ENST00000440612 KRTAP8-1Q8IUC2 63 aa10.62□□□□□ -0.71
CGREF1-207ENST00000440612 MACF1Q9UPN3 7388 aaKnown RBP10.57□□□□□ -0.72
CGREF1-207ENST00000440612 SVIPQ8NHG7 77 aa10.52□□□□□ -0.73
CGREF1-207ENST00000440612 KRTAP19-5Q3LI72 72 aa10.45□□□□□ -0.74
CGREF1-207ENST00000440612 KRTAP19-7Q3SYF9 63 aa10.42□□□□□ -0.74
CGREF1-207ENST00000440612 KRTAP12-3P60328 96 aa10.39□□□□□ -0.75
CGREF1-207ENST00000440612 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.31□□□□□ -0.76
CGREF1-207ENST00000440612 SYNE2Q8WXH0 6885 aaKnown RBP10.3□□□□□ -0.76
CGREF1-207ENST00000440612 MT1EP04732 61 aa10.22□□□□□ -0.77
CGREF1-207ENST00000440612 KRTAP5-9P26371 169 aa10.13□□□□□ -0.79
CGREF1-207ENST00000440612 KRTAP15-1Q3LI76 137 aa10.12□□□□□ -0.79
CGREF1-207ENST00000440612 SPRR2FQ96RM1 72 aa10.1□□□□□ -0.79
CGREF1-207ENST00000440612 MUC12Q9UKN1 5478 aa10.09□□□□□ -0.79
CGREF1-207ENST00000440612 KRTAP6-3Q3LI67 103 aa10□□□□□ -0.81
CGREF1-207ENST00000440612 MT1LQ93083 61 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms