RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 A8MU10 97 aa4.36□□□□□ -1.71
SPIRE1-204ENST00000440472 SPATA8Q6RVD6 105 aa4.36□□□□□ -1.71
SPIRE1-204ENST00000440472 LRP1Q07954 4544 aaKnown RBP4.35□□□□□ -1.71
SPIRE1-204ENST00000440472 MUC2Q02817 5179 aa4.35□□□□□ -1.71
SPIRE1-204ENST00000440472 RPL37P61927 97 aaKnown RBP4.34□□□□□ -1.71
SPIRE1-204ENST00000440472 KRTAP3-1Q9BYR8 98 aa4.34□□□□□ -1.71
SPIRE1-204ENST00000440472 COX6B2Q6YFQ2 88 aa4.34□□□□□ -1.71
SPIRE1-204ENST00000440472 A6NN06 94 aa4.33□□□□□ -1.72
SPIRE1-204ENST00000440472 UQCR11O14957 56 aa4.33□□□□□ -1.72
SPIRE1-204ENST00000440472 RBM12B-AS1Q9P1G2 102 aa4.32□□□□□ -1.72
SPIRE1-204ENST00000440472 MT1HL1P0DM35 61 aa4.31□□□□□ -1.72
SPIRE1-204ENST00000440472 XP32Q5T750 250 aa4.3□□□□□ -1.72
SPIRE1-204ENST00000440472 MIR22HGQ0VDD5 57 aa4.28□□□□□ -1.72
SPIRE1-204ENST00000440472 MYCBP2O75592 4640 aa4.26□□□□□ -1.73
SPIRE1-204ENST00000440472 TPRXLQ17RH7 258 aa4.24□□□□□ -1.73
SPIRE1-204ENST00000440472 CRCT1Q9UGL9 99 aa4.22□□□□□ -1.73
SPIRE1-204ENST00000440472 FAT4Q6V0I7 4981 aa4.22□□□□□ -1.73
SPIRE1-204ENST00000440472 H1FX-AS1Q4G0G2 97 aa4.2□□□□□ -1.74
SPIRE1-204ENST00000440472 A0A1B0GU33 70 aa4.19□□□□□ -1.74
SPIRE1-204ENST00000440472 KRTAP9-7A8MTY7 169 aa4.19□□□□□ -1.74
SPIRE1-204ENST00000440472 HMCN2Q8NDA2 5059 aa4.19□□□□□ -1.74
SPIRE1-204ENST00000440472 KRTAP3-3Q9BYR6 98 aa4.19□□□□□ -1.74
SPIRE1-204ENST00000440472 RNF213Q63HN8 5207 aa4.18□□□□□ -1.74
SPIRE1-204ENST00000440472 H0YAA0 97 aa4.16□□□□□ -1.74
SPIRE1-204ENST00000440472 J3QL48 77 aa4.16□□□□□ -1.74
SPIRE1-204ENST00000440472 S4R3F8 94 aa4.16□□□□□ -1.74
SPIRE1-204ENST00000440472 KRTAP10-6P60371 365 aaPredicted RBP4.12□□□□□ -1.75
SPIRE1-204ENST00000440472 KRTAP3-2Q9BYR7 98 aa4.11□□□□□ -1.75
SPIRE1-204ENST00000440472 LINC01554Q52M75 96 aa4.09□□□□□ -1.75
SPIRE1-204ENST00000440472 LRP2P98164 4655 aa4.08□□□□□ -1.76
SPIRE1-204ENST00000440472 MUC17Q685J3 4493 aa4.08□□□□□ -1.76
SPIRE1-204ENST00000440472 SEC61BP60468 96 aaKnown RBP4.07□□□□□ -1.76
SPIRE1-204ENST00000440472 K7ERS5 55 aa4.06□□□□□ -1.76
SPIRE1-204ENST00000440472 CSAG1Q6PB30 78 aa4.05□□□□□ -1.76
SPIRE1-204ENST00000440472 PRAC1Q96KF2 57 aa4.03□□□□□ -1.76
SPIRE1-204ENST00000440472 KRTAP13-4Q3LI77 160 aa4□□□□□ -1.77
SPIRE1-204ENST00000440472 LPAP08519 4548 aa4□□□□□ -1.77
SPIRE1-204ENST00000440472 P0C880 135 aa4□□□□□ -1.77
SPIRE1-204ENST00000440472 ADM2Q7Z4H4 148 aa4□□□□□ -1.77
SPIRE1-204ENST00000440472 M0QZ58 72 aa3.99□□□□□ -1.77
SPIRE1-204ENST00000440472 H3BS24 57 aa3.98□□□□□ -1.77
SPIRE1-204ENST00000440472 LCE2DQ5TA82 110 aaPredicted RBP3.98□□□□□ -1.77
SPIRE1-204ENST00000440472 FSIP2Q5CZC0 6907 aa3.97□□□□□ -1.77
SPIRE1-204ENST00000440472 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.96□□□□□ -1.78
SPIRE1-204ENST00000440472 ROMO1P60602 79 aa3.94□□□□□ -1.78
SPIRE1-204ENST00000440472 KRTAP19-2Q3LHN2 52 aa3.93□□□□□ -1.78
SPIRE1-204ENST00000440472 KRTAP25-1Q3LHN0 102 aa3.92□□□□□ -1.78
SPIRE1-204ENST00000440472 KRTAP4-1Q9BYQ7 146 aa3.92□□□□□ -1.78
SPIRE1-204ENST00000440472 A0A0D9SG42 100 aa3.89□□□□□ -1.79
SPIRE1-204ENST00000440472 KRTAP12-1P59990 96 aa3.89□□□□□ -1.79
SPIRE1-204ENST00000440472 FLGP20930 4061 aaPredicted RBP3.88□□□□□ -1.79
SPIRE1-204ENST00000440472 KRTAP12-2P59991 146 aa3.86□□□□□ -1.79
SPIRE1-204ENST00000440472 LCE2AQ5TA79 106 aaPredicted RBP3.85□□□□□ -1.79
SPIRE1-204ENST00000440472 R4GN34 69 aa3.82□□□□□ -1.8
SPIRE1-204ENST00000440472 SPINT4Q6UDR6 99 aa3.8□□□□□ -1.8
SPIRE1-204ENST00000440472 CRIPTQ9P021 101 aa3.79□□□□□ -1.8
SPIRE1-204ENST00000440472 LORP23490 312 aaPredicted RBP3.75□□□□□ -1.81
SPIRE1-204ENST00000440472 SSPOA2VEC9 5147 aa3.73□□□□□ -1.81
SPIRE1-204ENST00000440472 LCE2CQ5TA81 110 aa3.71□□□□□ -1.82
SPIRE1-204ENST00000440472 C10orf95Q9H7T3 257 aa3.67□□□□□ -1.82
SPIRE1-204ENST00000440472 NEBP20929 6669 aa3.63□□□□□ -1.83
SPIRE1-204ENST00000440472 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
SPIRE1-204ENST00000440472 SPRR2GQ9BYE4 73 aa3.62□□□□□ -1.83
SPIRE1-204ENST00000440472 PP632Q6XCG6 107 aa3.61□□□□□ -1.83
SPIRE1-204ENST00000440472 KRTAP23-1A1A580 65 aa3.59□□□□□ -1.83
SPIRE1-204ENST00000440472 MT1HP80294 61 aa3.59□□□□□ -1.83
SPIRE1-204ENST00000440472 CAMK2N1Q7Z7J9 78 aa3.59□□□□□ -1.83
SPIRE1-204ENST00000440472 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
SPIRE1-204ENST00000440472 KRTAP15-1Q3LI76 137 aa3.57□□□□□ -1.84
SPIRE1-204ENST00000440472 KRTAP19-1Q8IUB9 90 aa3.55□□□□□ -1.84
SPIRE1-204ENST00000440472 SYNE2Q8WXH0 6885 aaKnown RBP3.55□□□□□ -1.84
SPIRE1-204ENST00000440472 MT2AP02795 61 aa3.52□□□□□ -1.85
SPIRE1-204ENST00000440472 KRTAP9-8Q9BYQ0 159 aa3.52□□□□□ -1.85
SPIRE1-204ENST00000440472 M0R2T5 61 aa3.52□□□□□ -1.85
SPIRE1-204ENST00000440472 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
SPIRE1-204ENST00000440472 TNP1P09430 55 aa3.51□□□□□ -1.85
SPIRE1-204ENST00000440472 PLAC4Q8WY50 150 aa3.51□□□□□ -1.85
SPIRE1-204ENST00000440472 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
SPIRE1-204ENST00000440472 KRTAP19-8Q3LI54 63 aa3.5□□□□□ -1.85
SPIRE1-204ENST00000440472 MT1FP04733 61 aa3.49□□□□□ -1.85
SPIRE1-204ENST00000440472 KRTAP10-10P60014 251 aa3.47□□□□□ -1.85
SPIRE1-204ENST00000440472 KRTAP6-3Q3LI67 103 aa3.44□□□□□ -1.86
SPIRE1-204ENST00000440472 MACF1Q9UPN3 7388 aaKnown RBP3.42□□□□□ -1.86
SPIRE1-204ENST00000440472 KRTAP9-3Q9BYQ3 159 aa3.4□□□□□ -1.87
SPIRE1-204ENST00000440472 MT1BP07438 61 aa3.39□□□□□ -1.87
SPIRE1-204ENST00000440472 USH2AO75445 5202 aa3.39□□□□□ -1.87
SPIRE1-204ENST00000440472 FCGBPQ9Y6R7 5405 aaPredicted RBP3.38□□□□□ -1.87
SPIRE1-204ENST00000440472 KRTAP10-5P60370 271 aa3.34□□□□□ -1.88
SPIRE1-204ENST00000440472 MT1XP80297 61 aa3.33□□□□□ -1.88
SPIRE1-204ENST00000440472 SPRR5A0A1B0GTR4 108 aa3.32□□□□□ -1.88
SPIRE1-204ENST00000440472 KRTAP8-1Q8IUC2 63 aa3.31□□□□□ -1.88
SPIRE1-204ENST00000440472 LUZP6Q538Z0 58 aa3.3□□□□□ -1.88
SPIRE1-204ENST00000440472 KRTAP2-3P0C7H8 128 aa3.29□□□□□ -1.88
SPIRE1-204ENST00000440472 KRTAP2-4Q9BYR9 128 aa3.29□□□□□ -1.88
SPIRE1-204ENST00000440472 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
SPIRE1-204ENST00000440472 PRO2289Q9P1D8 64 aa3.28□□□□□ -1.89
SPIRE1-204ENST00000440472 KRTAP10-12P60413 245 aa3.23□□□□□ -1.89
SPIRE1-204ENST00000440472 LCE2BO14633 110 aa3.22□□□□□ -1.89
SPIRE1-204ENST00000440472 LOC100996750A0A140TA64 210 aa3.2□□□□□ -1.9
SPIRE1-204ENST00000440472 KRTAP4-6Q9BYQ5 205 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms