RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 A8MUN3 132 aa7.59□□□□□ -1.19
TNFRSF1A-204ENST00000440083 C4orf26Q17RF5 130 aa7.58□□□□□ -1.2
TNFRSF1A-204ENST00000440083 MPLKIPQ8TAP9 179 aa7.57□□□□□ -1.2
TNFRSF1A-204ENST00000440083 KRTAP9-2Q9BYQ4 174 aa7.57□□□□□ -1.2
TNFRSF1A-204ENST00000440083 V9GYY9 64 aa7.54□□□□□ -1.2
TNFRSF1A-204ENST00000440083 KRTAP9-6A0A140TA67 174 aa7.5□□□□□ -1.21
TNFRSF1A-204ENST00000440083 Q1T7F1 81 aa7.5□□□□□ -1.21
TNFRSF1A-204ENST00000440083 KRTAP19-2Q3LHN2 52 aa7.5□□□□□ -1.21
TNFRSF1A-204ENST00000440083 COX6B2Q6YFQ2 88 aa7.49□□□□□ -1.21
TNFRSF1A-204ENST00000440083 SPTSSBQ8NFR3 76 aa7.43□□□□□ -1.22
TNFRSF1A-204ENST00000440083 LORP23490 312 aaPredicted RBP7.41□□□□□ -1.22
TNFRSF1A-204ENST00000440083 PRR15LQ9BU68 103 aa7.4□□□□□ -1.22
TNFRSF1A-204ENST00000440083 KRTAP3-1Q9BYR8 98 aa7.4□□□□□ -1.22
TNFRSF1A-204ENST00000440083 LINC01558Q9Y6Z2 57 aa7.4□□□□□ -1.22
TNFRSF1A-204ENST00000440083 PSPHP1O15172 72 aa7.38□□□□□ -1.23
TNFRSF1A-204ENST00000440083 RBM12B-AS1Q9P1G2 102 aa7.38□□□□□ -1.23
TNFRSF1A-204ENST00000440083 FLGP20930 4061 aaPredicted RBP7.35□□□□□ -1.23
TNFRSF1A-204ENST00000440083 MT1HP80294 61 aa7.34□□□□□ -1.23
TNFRSF1A-204ENST00000440083 A0A1B0GU69 56 aa7.29□□□□□ -1.24
TNFRSF1A-204ENST00000440083 S4R3F8 94 aa7.29□□□□□ -1.24
TNFRSF1A-204ENST00000440083 H1FX-AS1Q4G0G2 97 aa7.28□□□□□ -1.24
TNFRSF1A-204ENST00000440083 Q5VV11 94 aa7.28□□□□□ -1.24
TNFRSF1A-204ENST00000440083 SEC61GP60059 68 aa7.26□□□□□ -1.25
TNFRSF1A-204ENST00000440083 LCA10Q71F78 164 aa7.22□□□□□ -1.25
TNFRSF1A-204ENST00000440083 A6NED7 52 aa7.2□□□□□ -1.26
TNFRSF1A-204ENST00000440083 M0R2T5 61 aa7.2□□□□□ -1.26
TNFRSF1A-204ENST00000440083 BRK1Q8WUW1 75 aa7.19□□□□□ -1.26
TNFRSF1A-204ENST00000440083 KRTAP10-6P60371 365 aaPredicted RBP7.16□□□□□ -1.26
TNFRSF1A-204ENST00000440083 CSAG1Q6PB30 78 aa7.09□□□□□ -1.27
TNFRSF1A-204ENST00000440083 CRCT1Q9UGL9 99 aa7.08□□□□□ -1.28
TNFRSF1A-204ENST00000440083 FSIP2Q5CZC0 6907 aa7.07□□□□□ -1.28
TNFRSF1A-204ENST00000440083 UQCR11O14957 56 aa7.07□□□□□ -1.28
TNFRSF1A-204ENST00000440083 CDC42SE1Q9NRR8 79 aa7.06□□□□□ -1.28
TNFRSF1A-204ENST00000440083 PRO0628Q9UI54 55 aa7.06□□□□□ -1.28
TNFRSF1A-204ENST00000440083 A0A1B0GU33 70 aa7.01□□□□□ -1.29
TNFRSF1A-204ENST00000440083 MIR22HGQ0VDD5 57 aa7.01□□□□□ -1.29
TNFRSF1A-204ENST00000440083 KRTAP9-8Q9BYQ0 159 aa6.97□□□□□ -1.29
TNFRSF1A-204ENST00000440083 SPATA8Q6RVD6 105 aa6.96□□□□□ -1.3
TNFRSF1A-204ENST00000440083 ADM2Q7Z4H4 148 aa6.96□□□□□ -1.3
TNFRSF1A-204ENST00000440083 LOC100996750A0A140TA64 210 aa6.95□□□□□ -1.3
TNFRSF1A-204ENST00000440083 KRTAP4-6Q9BYQ5 205 aa6.95□□□□□ -1.3
TNFRSF1A-204ENST00000440083 A8MU10 97 aa6.94□□□□□ -1.3
TNFRSF1A-204ENST00000440083 MT2AP02795 61 aa6.93□□□□□ -1.3
TNFRSF1A-204ENST00000440083 H0YAA0 97 aa6.92□□□□□ -1.3
TNFRSF1A-204ENST00000440083 MT1FP04733 61 aa6.88□□□□□ -1.31
TNFRSF1A-204ENST00000440083 P0C880 135 aa6.88□□□□□ -1.31
TNFRSF1A-204ENST00000440083 KRTAP10-10P60014 251 aa6.82□□□□□ -1.32
TNFRSF1A-204ENST00000440083 USH2AO75445 5202 aa6.79□□□□□ -1.32
TNFRSF1A-204ENST00000440083 PMAIP1Q13794 54 aa6.78□□□□□ -1.32
TNFRSF1A-204ENST00000440083 M0QZ58 72 aa6.76□□□□□ -1.33
TNFRSF1A-204ENST00000440083 KRTAP13-4Q3LI77 160 aa6.76□□□□□ -1.33
TNFRSF1A-204ENST00000440083 K7ERS5 55 aa6.75□□□□□ -1.33
TNFRSF1A-204ENST00000440083 KRTAP9-3Q9BYQ3 159 aa6.75□□□□□ -1.33
TNFRSF1A-204ENST00000440083 A0A0D9SG42 100 aa6.72□□□□□ -1.33
TNFRSF1A-204ENST00000440083 R4GN34 69 aa6.72□□□□□ -1.33
TNFRSF1A-204ENST00000440083 A6NN06 94 aa6.69□□□□□ -1.34
TNFRSF1A-204ENST00000440083 KRTAP9-7A8MTY7 169 aa6.68□□□□□ -1.34
TNFRSF1A-204ENST00000440083 SVIPQ8NHG7 77 aa6.67□□□□□ -1.34
TNFRSF1A-204ENST00000440083 SSPOA2VEC9 5147 aa6.66□□□□□ -1.34
TNFRSF1A-204ENST00000440083 LINC01554Q52M75 96 aa6.61□□□□□ -1.35
TNFRSF1A-204ENST00000440083 CRIPTQ9P021 101 aa6.61□□□□□ -1.35
TNFRSF1A-204ENST00000440083 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.59□□□□□ -1.35
TNFRSF1A-204ENST00000440083 SPINT4Q6UDR6 99 aa6.58□□□□□ -1.36
TNFRSF1A-204ENST00000440083 KTN1-AS1Q86SY8 53 aa6.55□□□□□ -1.36
TNFRSF1A-204ENST00000440083 KRTAP12-1P59990 96 aa6.53□□□□□ -1.36
TNFRSF1A-204ENST00000440083 KRTAP12-2P59991 146 aa6.52□□□□□ -1.37
TNFRSF1A-204ENST00000440083 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
TNFRSF1A-204ENST00000440083 FCGBPQ9Y6R7 5405 aaPredicted RBP6.43□□□□□ -1.38
TNFRSF1A-204ENST00000440083 SPRR2GQ9BYE4 73 aa6.43□□□□□ -1.38
TNFRSF1A-204ENST00000440083 ROMO1P60602 79 aa6.42□□□□□ -1.38
TNFRSF1A-204ENST00000440083 KRTAP4-8Q9BYQ9 185 aa6.41□□□□□ -1.38
TNFRSF1A-204ENST00000440083 MT1BP07438 61 aa6.37□□□□□ -1.39
TNFRSF1A-204ENST00000440083 KRTAP19-8Q3LI54 63 aa6.36□□□□□ -1.39
TNFRSF1A-204ENST00000440083 KRTAP19-6Q3LI70 58 aa6.36□□□□□ -1.39
TNFRSF1A-204ENST00000440083 CAMK2N1Q7Z7J9 78 aa6.34□□□□□ -1.39
TNFRSF1A-204ENST00000440083 PRAC1Q96KF2 57 aa6.33□□□□□ -1.4
TNFRSF1A-204ENST00000440083 PLAC4Q8WY50 150 aa6.29□□□□□ -1.4
TNFRSF1A-204ENST00000440083 SYNE2Q8WXH0 6885 aaKnown RBP6.24□□□□□ -1.41
TNFRSF1A-204ENST00000440083 KRTAP25-1Q3LHN0 102 aa6.17□□□□□ -1.42
TNFRSF1A-204ENST00000440083 MACF1Q9UPN3 7388 aaKnown RBP6.16□□□□□ -1.42
TNFRSF1A-204ENST00000440083 KRTAP4-12Q9BQ66 201 aa6.16□□□□□ -1.42
TNFRSF1A-204ENST00000440083 C10orf95Q9H7T3 257 aa6.16□□□□□ -1.42
TNFRSF1A-204ENST00000440083 KRTAP10-5P60370 271 aa6.14□□□□□ -1.43
TNFRSF1A-204ENST00000440083 LCE3BQ5TA77 95 aa6.1□□□□□ -1.43
TNFRSF1A-204ENST00000440083 TNP1P09430 55 aa6.03□□□□□ -1.44
TNFRSF1A-204ENST00000440083 MT1XP80297 61 aa6.03□□□□□ -1.44
TNFRSF1A-204ENST00000440083 KRTAP6-3Q3LI67 103 aa6□□□□□ -1.45
TNFRSF1A-204ENST00000440083 KRTAP9-9Q9BYP9 154 aa6□□□□□ -1.45
TNFRSF1A-204ENST00000440083 KRTAP9-4Q9BYQ2 154 aa6□□□□□ -1.45
TNFRSF1A-204ENST00000440083 PRO2289Q9P1D8 64 aa5.95□□□□□ -1.46
TNFRSF1A-204ENST00000440083 PP632Q6XCG6 107 aa5.92□□□□□ -1.46
TNFRSF1A-204ENST00000440083 NEBP20929 6669 aa5.9□□□□□ -1.46
TNFRSF1A-204ENST00000440083 KRTAP4-8A0A0G2JLE6 195 aa5.87□□□□□ -1.47
TNFRSF1A-204ENST00000440083 KRTAP23-1A1A580 65 aa5.84□□□□□ -1.47
TNFRSF1A-204ENST00000440083 KMT2DO14686 5537 aa5.83□□□□□ -1.48
TNFRSF1A-204ENST00000440083 KRTAP20-1Q3LI63 56 aa5.83□□□□□ -1.48
TNFRSF1A-204ENST00000440083 KRTAP10-7P60409 375 aaPredicted RBP5.78□□□□□ -1.48
TNFRSF1A-204ENST00000440083 MUC12Q9UKN1 5478 aa5.74□□□□□ -1.49
TNFRSF1A-204ENST00000440083 KRTAP10-12P60413 245 aa5.73□□□□□ -1.49
TNFRSF1A-204ENST00000440083 KRTAP5-9P26371 169 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms